RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 TOP1P11387 765 aaKnown RBP4.07□□□□□ -1.76
SUB1-202ENST00000502453 SCG2P13521 617 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 C6P13671 934 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 RPS2P15880 293 aaKnown RBP4.07□□□□□ -1.76
SUB1-202ENST00000502453 PDE6AP16499 860 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 GGT5P36269 586 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 SKIV2L2P42285 1042 aaKnown RBP4.07□□□□□ -1.76
SUB1-202ENST00000502453 PSMC4P43686 418 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 SP140Q13342 867 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 CAMK2DQ13557 499 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 TAF7Q15545 349 aaPredicted RBP4.07□□□□□ -1.76
SUB1-202ENST00000502453 CNGA2Q16280 664 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.07□□□□□ -1.76
SUB1-202ENST00000502453 PPP1R42Q7Z4L9 355 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 ARHGEF39Q8N4T4 335 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 FIBCD1Q8N539 461 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 ATP11CQ8NB49 1132 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 OR6J1Q8NGC5 347 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 RGMAQ96B86 450 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 IQCDQ96DY2 449 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 CNDP1Q96KN2 507 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 CCDC74BQ96LY2 380 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 SEMA4AQ9H3S1 761 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 TBC1D23Q9NUY8 699 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 ADPRHL2Q9NX46 363 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 IGSF9Q9P2J2 1179 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 CBLCQ9ULV8 474 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 SPO11Q9Y5K1 396 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 A0A0U1RQK1 487 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 ZNF320A2RRD8 509 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 F5H0A9 414 aaPredicted RBP4.07□□□□□ -1.76
SUB1-202ENST00000502453 CAPN9O14815 690 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 FMO6PO60774 539 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 PLATP00750 562 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 SNRNP70P08621 437 aaKnown RBP4.07□□□□□ -1.76
SUB1-202ENST00000502453 EIF2AK2P19525 551 aaKnown RBP4.07□□□□□ -1.76
SUB1-202ENST00000502453 HLA-DPA1P20036 260 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 SULT1E1P49888 294 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 MXI1P50539 228 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 MAMLD1Q13495 774 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 DCTN2Q13561 401 aaKnown RBP4.07□□□□□ -1.76
SUB1-202ENST00000502453 AUHQ13825 339 aaKnown RBP4.07□□□□□ -1.76
SUB1-202ENST00000502453 UBE3CQ15386 1083 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 FSCN1Q16658 493 aaKnown RBP4.07□□□□□ -1.76
SUB1-202ENST00000502453 CPZQ66K79 652 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 ATF7IPQ6VMQ6 1270 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 ARHGEF18Q6ZSZ5 1173 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 FRMD7Q6ZUT3 714 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 LPCAT2Q7L5N7 544 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 OSTM1Q86WC4 334 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 THNSL1Q8IYQ7 743 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 CNTROBQ8N137 903 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 TSPYL6Q8N831 410 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 ZBTB44Q8NCP5 570 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 SHC3Q92529 594 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 ZNF764Q96H86 408 aaPredicted RBP4.07□□□□□ -1.76
SUB1-202ENST00000502453 ACAP3Q96P50 834 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 TOR4AQ9NXH8 423 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 CPSF3Q9UKF6 684 aaKnown RBP4.07□□□□□ -1.76
SUB1-202ENST00000502453 PCDHA13Q9Y5I0 950 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 MYO1BO43795 1136 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 KCNC1P48547 511 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 ZNF445P59923 1031 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 RBP5P82980 135 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 PPM1JQ5JR12 505 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 TMEM201Q5SNT2 666 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 TIGD7Q6NT04 549 aaPredicted RBP4.07□□□□□ -1.76
SUB1-202ENST00000502453 DHX32Q7L7V1 743 aaKnown RBP4.07□□□□□ -1.76
SUB1-202ENST00000502453 FAM184AQ8NB25 1140 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 TTLL11Q8NHH1 800 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 PPP1R13BQ96KQ4 1090 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 MRGPRX2Q96LB1 330 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 NEK1Q96PY6 1258 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 PRAM1Q96QH2 718 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 PI4K2AQ9BTU6 479 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 BRIP1Q9BX63 1249 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 ITPAQ9BY32 194 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 ZFAND3Q9H8U3 227 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 TAB2Q9NYJ8 693 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 TMEFF2Q9UIK5 374 aaPredicted RBP4.07□□□□□ -1.76
SUB1-202ENST00000502453 HOOK1Q9UJC3 728 aaKnown RBP4.07□□□□□ -1.76
SUB1-202ENST00000502453 SIAH2O43255 324 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 KINO60870 393 aaKnown RBP4.07□□□□□ -1.76
SUB1-202ENST00000502453 GHRHP01286 108 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 YBX3P16989 372 aaKnown RBP eCLIP4.07□□□□□ -1.76
SUB1-202ENST00000502453 TGFB2P61812 414 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 STK4Q13043 487 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 IKBKEQ14164 716 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 SNX17Q15036 470 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 C5orf22Q49AR2 442 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 ZNF805Q5CZA5 627 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 CCDC183Q5T5S1 534 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 KLHL24Q6TFL4 600 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 PIWIL3Q7Z3Z3 882 aaKnown RBP4.07□□□□□ -1.76
SUB1-202ENST00000502453 VN1R5Q7Z5H4 357 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 IL31RAQ8NI17 732 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 SH3RF3Q8TEJ3 882 aaPredicted RBP4.07□□□□□ -1.76
SUB1-202ENST00000502453 FBXW5Q969U6 566 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 CCDC114Q96M63 670 aa4.07□□□□□ -1.76
SUB1-202ENST00000502453 WDR24Q96S15 920 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms