RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 VARS2Q5ST30 1063 aaKnown RBP21.53■■□□□ 1.04
SFXN1-203ENST00000502393 SLC8B1Q6J4K2 584 aa21.53■■□□□ 1.04
SFXN1-203ENST00000502393 MYCT1Q8N699 235 aa21.53■■□□□ 1.04
SFXN1-203ENST00000502393 RAD54LQ92698 747 aa21.53■■□□□ 1.04
SFXN1-203ENST00000502393 BICD1Q96G01 975 aa21.53■■□□□ 1.04
SFXN1-203ENST00000502393 PARVGQ9HBI0 331 aa21.53■■□□□ 1.04
SFXN1-203ENST00000502393 WNT16Q9UBV4 365 aa21.53■■□□□ 1.04
SFXN1-203ENST00000502393 NUB1Q9Y5A7 615 aa21.53■■□□□ 1.04
SFXN1-203ENST00000502393 CCL16O15467 120 aa21.52■■□□□ 1.04
SFXN1-203ENST00000502393 NARSO43776 548 aaKnown RBP21.52■■□□□ 1.04
SFXN1-203ENST00000502393 FAM13AO94988 1023 aa21.52■■□□□ 1.04
SFXN1-203ENST00000502393 CLTAP09496 248 aa21.52■■□□□ 1.04
SFXN1-203ENST00000502393 MCM6Q14566 821 aa21.52■■□□□ 1.04
SFXN1-203ENST00000502393 SIX5Q8N196 739 aa21.52■■□□□ 1.04
SFXN1-203ENST00000502393 FLCNQ8NFG4 579 aa21.52■■□□□ 1.04
SFXN1-203ENST00000502393 ZNF461Q8TAF7 563 aa21.52■■□□□ 1.04
SFXN1-203ENST00000502393 CCSER1Q9C0I3 900 aa21.52■■□□□ 1.04
SFXN1-203ENST00000502393 HAPLN2Q9GZV7 340 aa21.52■■□□□ 1.04
SFXN1-203ENST00000502393 CDH7Q9ULB5 785 aa21.52■■□□□ 1.04
SFXN1-203ENST00000502393 TBX20Q9UMR3 447 aa21.52■■□□□ 1.04
SFXN1-203ENST00000502393 POLIQ9UNA4 740 aa21.52■■□□□ 1.04
SFXN1-203ENST00000502393 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.52■■□□□ 1.04
SFXN1-203ENST00000502393 H7C4K7 107 aa21.51■■□□□ 1.03
SFXN1-203ENST00000502393 TRAK2O60296 914 aa21.51■■□□□ 1.03
SFXN1-203ENST00000502393 KRT18P05783 430 aaKnown RBP21.51■■□□□ 1.03
SFXN1-203ENST00000502393 SRFP11831 508 aa21.51■■□□□ 1.03
SFXN1-203ENST00000502393 NPR3P17342 541 aa21.51■■□□□ 1.03
SFXN1-203ENST00000502393 ABCD1P33897 745 aa21.51■■□□□ 1.03
SFXN1-203ENST00000502393 DDIT3P35638 169 aa21.51■■□□□ 1.03
SFXN1-203ENST00000502393 LIG4P49917 911 aa21.51■■□□□ 1.03
SFXN1-203ENST00000502393 HTR4Q13639 388 aa21.51■■□□□ 1.03
SFXN1-203ENST00000502393 MRPL58Q14197 206 aaKnown RBP21.51■■□□□ 1.03
SFXN1-203ENST00000502393 LARP4BQ92615 738 aaKnown RBP21.51■■□□□ 1.03
SFXN1-203ENST00000502393 SUSD3Q96L08 255 aa21.51■■□□□ 1.03
SFXN1-203ENST00000502393 PHOX2BQ99453 314 aa21.51■■□□□ 1.03
SFXN1-203ENST00000502393 CITO14578 2027 aa21.51■■□□□ 1.03
SFXN1-203ENST00000502393 PIEZO1Q92508 2521 aa21.51■■□□□ 1.03
SFXN1-203ENST00000502393 TTC26A0AVF1 554 aa21.5■■□□□ 1.03
SFXN1-203ENST00000502393 K7ENM7 598 aa21.5■■□□□ 1.03
SFXN1-203ENST00000502393 HNRNPDLO14979 420 aaKnown RBP21.5■■□□□ 1.03
SFXN1-203ENST00000502393 TBC1D4O60343 1298 aa21.5■■□□□ 1.03
SFXN1-203ENST00000502393 ABLIM3O94929 683 aa21.5■■□□□ 1.03
SFXN1-203ENST00000502393 PIGRP01833 764 aa21.5■■□□□ 1.03
SFXN1-203ENST00000502393 CFHP08603 1231 aa21.5■■□□□ 1.03
SFXN1-203ENST00000502393 CXCL8P10145 99 aa21.5■■□□□ 1.03
SFXN1-203ENST00000502393 NTHL1P78549 312 aa21.5■■□□□ 1.03
SFXN1-203ENST00000502393 ROR1Q01973 937 aa21.5■■□□□ 1.03
SFXN1-203ENST00000502393 CWF19L1Q69YN2 538 aaKnown RBP21.5■■□□□ 1.03
SFXN1-203ENST00000502393 ATOH1Q92858 354 aaPredicted RBP21.5■■□□□ 1.03
SFXN1-203ENST00000502393 TSPAN18Q96SJ8 248 aa21.5■■□□□ 1.03
SFXN1-203ENST00000502393 CLIC4Q9Y696 253 aa21.5■■□□□ 1.03
SFXN1-203ENST00000502393 NUMBLQ9Y6R0 609 aa21.5■■□□□ 1.03
SFXN1-203ENST00000502393 H0Y858 1186 aa21.49■■□□□ 1.03
SFXN1-203ENST00000502393 TBCAO75347 108 aaKnown RBP21.49■■□□□ 1.03
SFXN1-203ENST00000502393 AOC1P19801 751 aa21.49■■□□□ 1.03
SFXN1-203ENST00000502393 CYP3A5P20815 502 aa21.49■■□□□ 1.03
SFXN1-203ENST00000502393 ELF1P32519 619 aa21.49■■□□□ 1.03
SFXN1-203ENST00000502393 MCM4P33991 863 aa21.49■■□□□ 1.03
SFXN1-203ENST00000502393 PPP2R3AQ06190 1150 aa21.49■■□□□ 1.03
SFXN1-203ENST00000502393 PTPAQ15257 358 aa21.49■■□□□ 1.03
SFXN1-203ENST00000502393 APPL2Q8NEU8 664 aa21.49■■□□□ 1.03
SFXN1-203ENST00000502393 FGF13Q92913 245 aa21.49■■□□□ 1.03
SFXN1-203ENST00000502393 INTS4Q96HW7 963 aaKnown RBP21.49■■□□□ 1.03
SFXN1-203ENST00000502393 RTP3Q9BQQ7 232 aa21.49■■□□□ 1.03
SFXN1-203ENST00000502393 DNMT3BQ9UBC3 853 aaKnown RBP21.49■■□□□ 1.03
SFXN1-203ENST00000502393 TUBGCP4Q9UGJ1 667 aa21.49■■□□□ 1.03
SFXN1-203ENST00000502393 KCNH3Q9ULD8 1083 aa21.49■■□□□ 1.03
SFXN1-203ENST00000502393 DOCK8Q8NF50 2099 aa21.49■■□□□ 1.03
SFXN1-203ENST00000502393 ARHGEF37A1IGU5 675 aa21.48■■□□□ 1.03
SFXN1-203ENST00000502393 WDR27A2RRH5 827 aa21.48■■□□□ 1.03
SFXN1-203ENST00000502393 OGTO15294 1046 aa21.48■■□□□ 1.03
SFXN1-203ENST00000502393 FAM189A1O60320 539 aa21.48■■□□□ 1.03
SFXN1-203ENST00000502393 ATF2P15336 505 aa21.48■■□□□ 1.03
SFXN1-203ENST00000502393 SYT1P21579 422 aa21.48■■□□□ 1.03
SFXN1-203ENST00000502393 LRPAP1P30533 357 aa21.48■■□□□ 1.03
SFXN1-203ENST00000502393 GTF2BQ00403 316 aa21.48■■□□□ 1.03
SFXN1-203ENST00000502393 ZBTB6Q15916 424 aa21.48■■□□□ 1.03
SFXN1-203ENST00000502393 PABPC1LQ4VXU2 614 aaKnown RBP21.48■■□□□ 1.03
SFXN1-203ENST00000502393 MTSS1LQ765P7 747 aa21.48■■□□□ 1.03
SFXN1-203ENST00000502393 ITFG1Q8TB96 612 aa21.48■■□□□ 1.03
SFXN1-203ENST00000502393 DDX12PQ92771 950 aa21.48■■□□□ 1.03
SFXN1-203ENST00000502393 KIF12Q96FN5 646 aa21.48■■□□□ 1.03
SFXN1-203ENST00000502393 EPSTI1Q96J88 318 aa21.48■■□□□ 1.03
SFXN1-203ENST00000502393 ZHX3Q9H4I2 956 aa21.48■■□□□ 1.03
SFXN1-203ENST00000502393 HCFC1R1Q9NWW0 138 aa21.48■■□□□ 1.03
SFXN1-203ENST00000502393 CCDC39Q9UFE4 941 aa21.48■■□□□ 1.03
SFXN1-203ENST00000502393 UBQLN1Q9UMX0 589 aaKnown RBP21.48■■□□□ 1.03
SFXN1-203ENST00000502393 SRPRBQ9Y5M8 271 aaKnown RBP21.48■■□□□ 1.03
SFXN1-203ENST00000502393 USP34Q70CQ2 3546 aa21.47■■□□□ 1.03
SFXN1-203ENST00000502393 A0A0B4J269 797 aa21.47■■□□□ 1.03
SFXN1-203ENST00000502393 KRBA1A5PL33 1030 aa21.47■■□□□ 1.03
SFXN1-203ENST00000502393 XPOTO43592 962 aaKnown RBP21.47■■□□□ 1.03
SFXN1-203ENST00000502393 ADRB2P07550 413 aa21.47■■□□□ 1.03
SFXN1-203ENST00000502393 TNFSF9P41273 254 aa21.47■■□□□ 1.03
SFXN1-203ENST00000502393 SPAG1Q07617 926 aa21.47■■□□□ 1.03
SFXN1-203ENST00000502393 CTXN3Q4LDR2 81 aa21.47■■□□□ 1.03
SFXN1-203ENST00000502393 TPGS2Q68CL5 300 aa21.47■■□□□ 1.03
SFXN1-203ENST00000502393 ZNF280DQ6N043 979 aa21.47■■□□□ 1.03
SFXN1-203ENST00000502393 PARM1Q6UWI2 310 aa21.47■■□□□ 1.03
SFXN1-203ENST00000502393 MAP4K3Q8IVH8 894 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms