RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 WASP42768 502 aa3.29□□□□□ -1.88
SMAD1-203ENST00000502342 USP14P54578 494 aa3.29□□□□□ -1.88
SMAD1-203ENST00000502342 NOMO3P69849 1222 aa3.29□□□□□ -1.88
SMAD1-203ENST00000502342 HSD11B2P80365 405 aa3.29□□□□□ -1.88
SMAD1-203ENST00000502342 ATP8B2P98198 1209 aa3.29□□□□□ -1.88
SMAD1-203ENST00000502342 GUCY1B3Q02153 619 aa3.29□□□□□ -1.88
SMAD1-203ENST00000502342 BEAN1Q3B7T3 259 aa3.29□□□□□ -1.88
SMAD1-203ENST00000502342 BRDTQ58F21 947 aaPredicted RBP3.29□□□□□ -1.88
SMAD1-203ENST00000502342 NOMO2Q5JPE7 1267 aa3.29□□□□□ -1.88
SMAD1-203ENST00000502342 AGAP9Q5VTM2 703 aa3.29□□□□□ -1.88
SMAD1-203ENST00000502342 OTUD7BQ6GQQ9 843 aa3.29□□□□□ -1.88
SMAD1-203ENST00000502342 PPP4R3AQ6IN85 833 aa3.29□□□□□ -1.88
SMAD1-203ENST00000502342 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.29□□□□□ -1.88
SMAD1-203ENST00000502342 LRRC55Q6ZSA7 311 aa3.29□□□□□ -1.88
SMAD1-203ENST00000502342 SEM1Q6ZVN7 128 aa3.29□□□□□ -1.88
SMAD1-203ENST00000502342 MRGPRGQ86SM5 289 aa3.29□□□□□ -1.88
SMAD1-203ENST00000502342 RHOT2Q8IXI1 618 aa3.29□□□□□ -1.88
SMAD1-203ENST00000502342 FAM177A1Q8N128 213 aaPredicted RBP3.29□□□□□ -1.88
SMAD1-203ENST00000502342 MIER2Q8N344 545 aa3.29□□□□□ -1.88
SMAD1-203ENST00000502342 FITM2Q8N6M3 262 aa3.29□□□□□ -1.88
SMAD1-203ENST00000502342 AMER2Q8N7J2 671 aa3.29□□□□□ -1.88
SMAD1-203ENST00000502342 DCBLD1Q8N8Z6 715 aa3.29□□□□□ -1.88
SMAD1-203ENST00000502342 RNF31Q96EP0 1072 aa3.29□□□□□ -1.88
SMAD1-203ENST00000502342 PRRX2Q99811 253 aa3.29□□□□□ -1.88
SMAD1-203ENST00000502342 ADAM2Q99965 735 aa3.29□□□□□ -1.88
SMAD1-203ENST00000502342 VRK1Q99986 396 aaPredicted RBP3.29□□□□□ -1.88
SMAD1-203ENST00000502342 ASPSCR1Q9BZE9 553 aa3.29□□□□□ -1.88
SMAD1-203ENST00000502342 NOP58Q9Y2X3 529 aaKnown RBP3.29□□□□□ -1.88
SMAD1-203ENST00000502342 MTO1Q9Y2Z2 717 aaKnown RBP3.29□□□□□ -1.88
SMAD1-203ENST00000502342 IPPQ9Y573 584 aa3.29□□□□□ -1.88
SMAD1-203ENST00000502342 DMRT1Q9Y5R6 373 aa3.29□□□□□ -1.88
SMAD1-203ENST00000502342 HS3ST4Q9Y661 456 aa3.29□□□□□ -1.88
SMAD1-203ENST00000502342 hCG_2014768A0A024R1R8 64 aa3.28□□□□□ -1.88
SMAD1-203ENST00000502342 CDHR4A6H8M9 788 aa3.28□□□□□ -1.88
SMAD1-203ENST00000502342 GRM6O15303 877 aa3.28□□□□□ -1.88
SMAD1-203ENST00000502342 B3GALT2O43825 422 aa3.28□□□□□ -1.88
SMAD1-203ENST00000502342 AGFG2O95081 481 aa3.28□□□□□ -1.88
SMAD1-203ENST00000502342 SPDEFO95238 335 aa3.28□□□□□ -1.88
SMAD1-203ENST00000502342 GPANK1O95872 356 aa3.28□□□□□ -1.88
SMAD1-203ENST00000502342 MTHFD1P11586 935 aaKnown RBP3.28□□□□□ -1.88
SMAD1-203ENST00000502342 FGFR4P22455 802 aa3.28□□□□□ -1.88
SMAD1-203ENST00000502342 SMARCA1P28370 1054 aa3.28□□□□□ -1.88
SMAD1-203ENST00000502342 BMPR1AP36894 532 aa3.28□□□□□ -1.88
SMAD1-203ENST00000502342 CTXN1P60606 82 aa3.28□□□□□ -1.88
SMAD1-203ENST00000502342 CDC42EP1Q00587 391 aa3.28□□□□□ -1.88
SMAD1-203ENST00000502342 KHDC1Q4VXA5 237 aaKnown RBP3.28□□□□□ -1.88
SMAD1-203ENST00000502342 UTP14CQ5TAP6 766 aaKnown RBP3.28□□□□□ -1.88
SMAD1-203ENST00000502342 B3GNTL1Q67FW5 361 aaPredicted RBP3.28□□□□□ -1.88
SMAD1-203ENST00000502342 ARHGEF19Q8IW93 802 aa3.28□□□□□ -1.88
SMAD1-203ENST00000502342 NSUN7Q8NE18 718 aaKnown RBP3.28□□□□□ -1.88
SMAD1-203ENST00000502342 SUPT20HQ8NEM7 779 aa3.28□□□□□ -1.88
SMAD1-203ENST00000502342 NLGN4YQ8NFZ3 816 aaPredicted RBP3.28□□□□□ -1.88
SMAD1-203ENST00000502342 CAVIN3Q969G5 261 aa3.28□□□□□ -1.88
SMAD1-203ENST00000502342 DMRTA2Q96SC8 542 aa3.28□□□□□ -1.88
SMAD1-203ENST00000502342 AGAP2Q99490 1192 aa3.28□□□□□ -1.88
SMAD1-203ENST00000502342 ALOXE3Q9BYJ1 711 aa3.28□□□□□ -1.88
SMAD1-203ENST00000502342 C11orf54Q9H0W9 315 aaPredicted RBP3.28□□□□□ -1.88
SMAD1-203ENST00000502342 RNPEPQ9H4A4 650 aa3.28□□□□□ -1.88
SMAD1-203ENST00000502342 AASDHPPTQ9NRN7 309 aa3.28□□□□□ -1.88
SMAD1-203ENST00000502342 C11orf21Q9P2W6 132 aa3.28□□□□□ -1.88
SMAD1-203ENST00000502342 DKK2Q9UBU2 259 aa3.28□□□□□ -1.88
SMAD1-203ENST00000502342 TESQ9UGI8 421 aaKnown RBP3.28□□□□□ -1.88
SMAD1-203ENST00000502342 SLC45A2Q9UMX9 530 aa3.28□□□□□ -1.88
SMAD1-203ENST00000502342 SHROOM4Q9ULL8 1493 aa3.28□□□□□ -1.88
SMAD1-203ENST00000502342 LRRC14BA6NHZ5 514 aa3.27□□□□□ -1.89
SMAD1-203ENST00000502342 SUV39H1O43463 412 aa3.27□□□□□ -1.89
SMAD1-203ENST00000502342 IL33O95760 270 aa3.27□□□□□ -1.89
SMAD1-203ENST00000502342 FOSP01100 380 aaPredicted RBP3.27□□□□□ -1.89
SMAD1-203ENST00000502342 CFIP05156 583 aa3.27□□□□□ -1.89
SMAD1-203ENST00000502342 ITGAMP11215 1152 aa3.27□□□□□ -1.89
SMAD1-203ENST00000502342 SLC6A4P31645 630 aa3.27□□□□□ -1.89
SMAD1-203ENST00000502342 RECQLP46063 649 aaPredicted RBP3.27□□□□□ -1.89
SMAD1-203ENST00000502342 IGBP1P78318 339 aa3.27□□□□□ -1.89
SMAD1-203ENST00000502342 KRT85P78386 507 aa3.27□□□□□ -1.89
SMAD1-203ENST00000502342 OCA2Q04671 838 aa3.27□□□□□ -1.89
SMAD1-203ENST00000502342 CRB2Q5IJ48 1285 aa3.27□□□□□ -1.89
SMAD1-203ENST00000502342 ARMC6Q6NXE6 501 aa3.27□□□□□ -1.89
SMAD1-203ENST00000502342 GPR149Q86SP6 731 aa3.27□□□□□ -1.89
SMAD1-203ENST00000502342 ZBTB46Q86UZ6 589 aa3.27□□□□□ -1.89
SMAD1-203ENST00000502342 AOPEPQ8N6M6 819 aa3.27□□□□□ -1.89
SMAD1-203ENST00000502342 SLC17A8Q8NDX2 589 aa3.27□□□□□ -1.89
SMAD1-203ENST00000502342 BEND2Q8NDZ0 799 aa3.27□□□□□ -1.89
SMAD1-203ENST00000502342 ASB10Q8WXI3 467 aa3.27□□□□□ -1.89
SMAD1-203ENST00000502342 NACC2Q96BF6 587 aa3.27□□□□□ -1.89
SMAD1-203ENST00000502342 PACSIN1Q9BY11 444 aa3.27□□□□□ -1.89
SMAD1-203ENST00000502342 SLC13A1Q9BZW2 595 aa3.27□□□□□ -1.89
SMAD1-203ENST00000502342 BRINP2Q9C0B6 783 aa3.27□□□□□ -1.89
SMAD1-203ENST00000502342 SLITRK6Q9H5Y7 841 aa3.27□□□□□ -1.89
SMAD1-203ENST00000502342 MAN1C1Q9NR34 630 aa3.27□□□□□ -1.89
SMAD1-203ENST00000502342 FAM30AQ9NZY2 134 aa3.27□□□□□ -1.89
SMAD1-203ENST00000502342 HSFX1Q9UBD0 423 aa3.27□□□□□ -1.89
SMAD1-203ENST00000502342 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.27□□□□□ -1.89
SMAD1-203ENST00000502342 SALL3Q9BXA9 1300 aa3.26□□□□□ -1.89
SMAD1-203ENST00000502342 POLR2AP24928 1970 aaKnown RBP3.26□□□□□ -1.89
SMAD1-203ENST00000502342 PIPSLA2A3N6 862 aa3.26□□□□□ -1.89
SMAD1-203ENST00000502342 SGTAO43765 313 aa3.26□□□□□ -1.89
SMAD1-203ENST00000502342 CDKL5O76039 1030 aa3.26□□□□□ -1.89
SMAD1-203ENST00000502342 RHOBTB3O94955 611 aa3.26□□□□□ -1.89
SMAD1-203ENST00000502342 ZRANB2O95218 330 aaKnown RBP eCLIP3.26□□□□□ -1.89
SMAD1-203ENST00000502342 NCLP19338 710 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms