RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 MAMSTRQ6ZN01 415 aa10.07□□□□□ -0.8
CCDC171-209ENST00000498725 PDZD4Q76G19 769 aaPredicted RBP10.07□□□□□ -0.8
CCDC171-209ENST00000498725 ZNF687Q8N1G0 1237 aa10.07□□□□□ -0.8
CCDC171-209ENST00000498725 FAM160A2Q8N612 972 aaPredicted RBP10.07□□□□□ -0.8
CCDC171-209ENST00000498725 OXER1Q8TDS5 423 aa10.07□□□□□ -0.8
CCDC171-209ENST00000498725 IRF7Q92985 503 aa10.07□□□□□ -0.8
CCDC171-209ENST00000498725 DDX27Q96GQ7 796 aaKnown RBP10.07□□□□□ -0.8
CCDC171-209ENST00000498725 ZSWIM3Q96MP5 696 aa10.07□□□□□ -0.8
CCDC171-209ENST00000498725 CYP4F11Q9HBI6 524 aa10.07□□□□□ -0.8
CCDC171-209ENST00000498725 USP24Q9UPU5 2620 aa10.07□□□□□ -0.8
CCDC171-209ENST00000498725 ZFHX4Q86UP3 3567 aa10.07□□□□□ -0.8
CCDC171-209ENST00000498725 EML5Q05BV3 1969 aa10.06□□□□□ -0.8
CCDC171-209ENST00000498725 WDR27A2RRH5 827 aa10.06□□□□□ -0.8
CCDC171-209ENST00000498725 SLC38A8A6NNN8 435 aa10.06□□□□□ -0.8
CCDC171-209ENST00000498725 ZNF263O14978 683 aa10.06□□□□□ -0.8
CCDC171-209ENST00000498725 LRP3O75074 770 aa10.06□□□□□ -0.8
CCDC171-209ENST00000498725 DGAT1O75907 488 aa10.06□□□□□ -0.8
CCDC171-209ENST00000498725 SEC24AO95486 1093 aa10.06□□□□□ -0.8
CCDC171-209ENST00000498725 GCFC2P16383 781 aaKnown RBP10.06□□□□□ -0.8
CCDC171-209ENST00000498725 KPNA1P52294 538 aaPredicted RBP10.06□□□□□ -0.8
CCDC171-209ENST00000498725 ROR1Q01973 937 aa10.06□□□□□ -0.8
CCDC171-209ENST00000498725 SPIRE1Q08AE8 756 aa10.06□□□□□ -0.8
CCDC171-209ENST00000498725 PRPF4BQ13523 1007 aaKnown RBP10.06□□□□□ -0.8
CCDC171-209ENST00000498725 TOB2Q14106 344 aaPredicted RBP10.06□□□□□ -0.8
CCDC171-209ENST00000498725 BMP2KLQ5H9B9 411 aa10.06□□□□□ -0.8
CCDC171-209ENST00000498725 EARS2Q5JPH6 523 aaKnown RBP10.06□□□□□ -0.8
CCDC171-209ENST00000498725 PRSS36Q5K4E3 855 aa10.06□□□□□ -0.8
CCDC171-209ENST00000498725 Q6ZS52 159 aa10.06□□□□□ -0.8
CCDC171-209ENST00000498725 ZBTB8OSQ8IWT0 167 aa10.06□□□□□ -0.8
CCDC171-209ENST00000498725 YAF2Q8IY57 180 aa10.06□□□□□ -0.8
CCDC171-209ENST00000498725 C12orf50Q8NA57 414 aaPredicted RBP10.06□□□□□ -0.8
CCDC171-209ENST00000498725 C3orf58Q8NDZ4 430 aa10.06□□□□□ -0.8
CCDC171-209ENST00000498725 CSGALNACT1Q8TDX6 532 aa10.06□□□□□ -0.8
CCDC171-209ENST00000498725 ASB16Q96NS5 453 aa10.06□□□□□ -0.8
CCDC171-209ENST00000498725 ADPGKQ9BRR6 497 aa10.06□□□□□ -0.8
CCDC171-209ENST00000498725 AGXT2Q9BYV1 514 aa10.06□□□□□ -0.8
CCDC171-209ENST00000498725 ARRDC1-AS1Q9H2J1 176 aa10.06□□□□□ -0.8
CCDC171-209ENST00000498725 SMOC1Q9H4F8 434 aa10.06□□□□□ -0.8
CCDC171-209ENST00000498725 SLITRK6Q9H5Y7 841 aa10.06□□□□□ -0.8
CCDC171-209ENST00000498725 POLD4Q9HCU8 107 aa10.06□□□□□ -0.8
CCDC171-209ENST00000498725 ANKEF1Q9NU02 776 aa10.06□□□□□ -0.8
CCDC171-209ENST00000498725 PRMT7Q9NVM4 692 aaPredicted RBP10.06□□□□□ -0.8
CCDC171-209ENST00000498725 C2orf42Q9NWW7 574 aa10.06□□□□□ -0.8
CCDC171-209ENST00000498725 CHD8Q9HCK8 2581 aa10.06□□□□□ -0.8
CCDC171-209ENST00000498725 NCANO14594 1321 aa10.06□□□□□ -0.8
CCDC171-209ENST00000498725 CFAP47Q6ZTR5 3102 aa10.05□□□□□ -0.8
CCDC171-209ENST00000498725 ZMYM2Q9UBW7 1377 aa10.05□□□□□ -0.8
CCDC171-209ENST00000498725 ZNF197O14709 1029 aa10.05□□□□□ -0.8
CCDC171-209ENST00000498725 MAP3K13O43283 966 aa10.05□□□□□ -0.8
CCDC171-209ENST00000498725 EDN1P05305 212 aa10.05□□□□□ -0.8
CCDC171-209ENST00000498725 POU2F2P09086 479 aa10.05□□□□□ -0.8
CCDC171-209ENST00000498725 CHRNB1P11230 501 aa10.05□□□□□ -0.8
CCDC171-209ENST00000498725 PSMC3P17980 439 aa10.05□□□□□ -0.8
CCDC171-209ENST00000498725 ATP2B1P20020 1258 aa10.05□□□□□ -0.8
CCDC171-209ENST00000498725 PSMA5P28066 241 aa10.05□□□□□ -0.8
CCDC171-209ENST00000498725 TXKP42681 527 aa10.05□□□□□ -0.8
CCDC171-209ENST00000498725 PXNP49023 591 aaPredicted RBP10.05□□□□□ -0.8
CCDC171-209ENST00000498725 RARRES1P49788 294 aa10.05□□□□□ -0.8
CCDC171-209ENST00000498725 FOSBP53539 338 aa10.05□□□□□ -0.8
CCDC171-209ENST00000498725 OSTNP61366 133 aa10.05□□□□□ -0.8
CCDC171-209ENST00000498725 CYP4A22Q5TCH4 519 aa10.05□□□□□ -0.8
CCDC171-209ENST00000498725 GALNT17Q6IS24 598 aa10.05□□□□□ -0.8
CCDC171-209ENST00000498725 ANKS3Q6ZW76 656 aa10.05□□□□□ -0.8
CCDC171-209ENST00000498725 MAP4K3Q8IVH8 894 aa10.05□□□□□ -0.8
CCDC171-209ENST00000498725 SLFN12Q8IYM2 578 aa10.05□□□□□ -0.8
CCDC171-209ENST00000498725 ELMOD1Q8N336 334 aa10.05□□□□□ -0.8
CCDC171-209ENST00000498725 ZNF461Q8TAF7 563 aa10.05□□□□□ -0.8
CCDC171-209ENST00000498725 ZSCAN18Q8TBC5 510 aaPredicted RBP10.05□□□□□ -0.8
CCDC171-209ENST00000498725 SMARCD2Q92925 531 aa10.05□□□□□ -0.8
CCDC171-209ENST00000498725 NFKBIZQ9BYH8 718 aa10.05□□□□□ -0.8
CCDC171-209ENST00000498725 SH2B1Q9NRF2 756 aaPredicted RBP10.05□□□□□ -0.8
CCDC171-209ENST00000498725 RXFP3Q9NSD7 469 aa10.05□□□□□ -0.8
CCDC171-209ENST00000498725 PCDHA12Q9UN75 941 aa10.05□□□□□ -0.8
CCDC171-209ENST00000498725 INSL5Q9Y5Q6 135 aa10.05□□□□□ -0.8
CCDC171-209ENST00000498725 CITO14578 2027 aa10.05□□□□□ -0.8
CCDC171-209ENST00000498725 ATG2BQ96BY7 2078 aa10.05□□□□□ -0.8
CCDC171-209ENST00000498725 ARHGEF37A1IGU5 675 aa10.04□□□□□ -0.8
CCDC171-209ENST00000498725 HEPACAM2A8MVW5 462 aa10.04□□□□□ -0.8
CCDC171-209ENST00000498725 TRAPPC3O43617 180 aa10.04□□□□□ -0.8
CCDC171-209ENST00000498725 HOXB3P14651 431 aaPredicted RBP10.04□□□□□ -0.8
CCDC171-209ENST00000498725 PMLP29590 882 aa10.04□□□□□ -0.8
CCDC171-209ENST00000498725 HSPA4P34932 840 aa10.04□□□□□ -0.8
CCDC171-209ENST00000498725 TWF1Q12792 350 aa10.04□□□□□ -0.8
CCDC171-209ENST00000498725 PTGDRQ13258 359 aa10.04□□□□□ -0.8
CCDC171-209ENST00000498725 LRRC32Q14392 662 aa10.04□□□□□ -0.8
CCDC171-209ENST00000498725 TEAD2Q15562 447 aa10.04□□□□□ -0.8
CCDC171-209ENST00000498725 CALCRLQ16602 461 aa10.04□□□□□ -0.8
CCDC171-209ENST00000498725 CPLX2Q6PUV4 134 aaKnown RBP10.04□□□□□ -0.8
CCDC171-209ENST00000498725 CD300LGQ6UXG3 332 aa10.04□□□□□ -0.8
CCDC171-209ENST00000498725 LONP2Q86WA8 852 aa10.04□□□□□ -0.8
CCDC171-209ENST00000498725 SPEM1Q8N4L4 309 aa10.04□□□□□ -0.8
CCDC171-209ENST00000498725 FAM200AQ8TCP9 573 aa10.04□□□□□ -0.8
CCDC171-209ENST00000498725 BSNDQ8WZ55 320 aa10.04□□□□□ -0.8
CCDC171-209ENST00000498725 DDX1Q92499 740 aaKnown RBP10.04□□□□□ -0.8
CCDC171-209ENST00000498725 KCNB2Q92953 911 aa10.04□□□□□ -0.8
CCDC171-209ENST00000498725 PRIMPOLQ96LW4 560 aa10.04□□□□□ -0.8
CCDC171-209ENST00000498725 ZNF512Q96ME7 567 aaPredicted RBP10.04□□□□□ -0.8
CCDC171-209ENST00000498725 PPP1R10Q96QC0 940 aaKnown RBP10.04□□□□□ -0.8
CCDC171-209ENST00000498725 KIFC3Q9BVG8 833 aa10.04□□□□□ -0.8
CCDC171-209ENST00000498725 FZD8Q9H461 694 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms