RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 C2CD5Q86YS7 1000 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 UBR7Q8N806 425 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 SLC30A5Q8TAD4 765 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 ZNF473Q8WTR7 871 aaKnown RBP4.25□□□□□ -1.73
CLTC-209ENST00000498711 TMEM174Q8WUU8 243 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 P3H4Q92791 437 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 TMEM109Q9BVC6 243 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 CCDC134Q9H6E4 229 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 C6orf50Q9HD87 102 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 ATP13A2Q9NQ11 1180 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 SWAP70Q9UH65 585 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 GPR75-ASB3A0A0A6YYF3 556 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 SHTN1A0MZ66 631 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 MACROD2A1Z1Q3 448 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 IPO7O95373 1038 aaKnown RBP4.25□□□□□ -1.73
CLTC-209ENST00000498711 ARAFP10398 606 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 CPEP16870 476 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 MAOBP27338 520 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 HOXA10P31260 410 aaPredicted RBP4.25□□□□□ -1.73
CLTC-209ENST00000498711 HIBADHP31937 336 aaKnown RBP4.25□□□□□ -1.73
CLTC-209ENST00000498711 GRK4P32298 578 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 SLC1A4P43007 532 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 DRG2P55039 364 aaKnown RBP4.25□□□□□ -1.73
CLTC-209ENST00000498711 CRY2Q49AN0 593 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 PREPLQ4J6C6 727 aaPredicted RBP4.25□□□□□ -1.73
CLTC-209ENST00000498711 PKDCCQ504Y2 493 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 FAM83BQ5T0W9 1011 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 SFMBT2Q5VUG0 894 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 MOXD1Q6UVY6 613 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 LRRTM3Q86VH5 581 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 NLRP14Q86W24 1093 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 ATL2Q8NHH9 583 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 MYCBPAPQ8TBZ2 947 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 CAGE1Q8TC20 777 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 CRYGNQ8WXF5 182 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 CALML4Q96GE6 196 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 BORCS6Q96GS4 357 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 DHRS1Q96LJ7 313 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 CCT8L2Q96SF2 557 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 AARSD1Q9BTE6 412 aaKnown RBP4.25□□□□□ -1.73
CLTC-209ENST00000498711 TARS2Q9BW92 718 aaKnown RBP4.25□□□□□ -1.73
CLTC-209ENST00000498711 MRPL4Q9BYD3 311 aaKnown RBP4.25□□□□□ -1.73
CLTC-209ENST00000498711 TAF1DQ9H5J8 278 aaPredicted RBP4.25□□□□□ -1.73
CLTC-209ENST00000498711 ACTR5Q9H9F9 607 aaPredicted RBP4.25□□□□□ -1.73
CLTC-209ENST00000498711 JADE2Q9NQC1 790 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 SUCLA2Q9P2R7 463 aaPredicted RBP4.25□□□□□ -1.73
CLTC-209ENST00000498711 TRAF3IP3Q9Y228 551 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 DIS3Q9Y2L1 958 aaKnown RBP4.25□□□□□ -1.73
CLTC-209ENST00000498711 BZW2Q9Y6E2 419 aaKnown RBP4.25□□□□□ -1.73
CLTC-209ENST00000498711 MYO3BQ8WXR4 1341 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 PITPNM2Q9BZ72 1349 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 DNAJC25-GNG10A0A024R161 153 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 TRBV23-1A0A0A0MS06 115 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 ANKRD34BA5PLL1 514 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 SMCO2A6NFE2 343 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 TSPY2A6NKD2 308 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 TMCO5BA8MYB1 307 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 DCDC2CA8MYV0 355 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 CCDC188H7C350 402 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 GPR25O00155 361 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 TRAPPC3O43617 180 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 NCK2O43639 380 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 ZNF862O60290 1169 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 PPFIA2O75334 1257 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 PALMO75781 387 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 DGAT1O75907 488 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 DNAJC8O75937 253 aaPredicted RBP4.24□□□□□ -1.73
CLTC-209ENST00000498711 YBX3P16989 372 aaKnown RBP eCLIP4.24□□□□□ -1.732e-10■□□□□ 8.9
CLTC-209ENST00000498711 KLRC1P26715 233 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 KLRK1P26718 216 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 ADH6P28332 368 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 HADHBP55084 474 aaKnown RBP4.24□□□□□ -1.73
CLTC-209ENST00000498711 ASIC1P78348 528 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 GSTO1P78417 241 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 FKBP3Q00688 224 aaKnown RBP4.24□□□□□ -1.73
CLTC-209ENST00000498711 GFPT1Q06210 699 aaPredicted RBP4.24□□□□□ -1.73
CLTC-209ENST00000498711 GABPAQ06546 454 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 GPR162Q16538 588 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 CCDC96Q2M329 555 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 ZNF568Q3ZCX4 644 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 SLC9C1Q4G0N8 1177 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 FAM209AQ5JX71 171 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 CFAP58Q5T655 872 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 PSAPL1Q6NUJ1 521 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 C8orf74Q6P047 294 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 FAM117BQ6P1L5 589 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 MICALCLQ6ZW33 695 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 RRAGAQ7L523 313 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 FRMD5Q7Z6J6 570 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 LARP4BQ92615 738 aaKnown RBP4.24□□□□□ -1.73
CLTC-209ENST00000498711 HAS1Q92839 578 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 CELF1Q92879 486 aaKnown RBP4.24□□□□□ -1.73
CLTC-209ENST00000498711 CCDC43Q96MW1 224 aaKnown RBP4.24□□□□□ -1.73
CLTC-209ENST00000498711 CLUHP3Q96NS8 147 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 NAP1L4Q99733 375 aaKnown RBP4.24□□□□□ -1.73
CLTC-209ENST00000498711 RTFDC1Q9BY42 306 aaPredicted RBP4.24□□□□□ -1.73
CLTC-209ENST00000498711 SLITRK6Q9H5Y7 841 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 MKNK2Q9HBH9 465 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 SIX2Q9NPC8 291 aa4.24□□□□□ -1.73
CLTC-209ENST00000498711 NIP7Q9Y221 180 aaKnown RBP eCLIP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms