RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 DHX32Q7L7V1 743 aaKnown RBP6.28□□□□□ -1.4
SPTA1-209ENST00000498708 TMEM173Q86WV6 379 aaPredicted RBP6.28□□□□□ -1.4
SPTA1-209ENST00000498708 MB21D2Q8IYB1 491 aaPredicted RBP6.28□□□□□ -1.4
SPTA1-209ENST00000498708 VPS52Q8N1B4 723 aa6.28□□□□□ -1.4
SPTA1-209ENST00000498708 SRBD1Q8N5C6 995 aaKnown RBP6.28□□□□□ -1.4
SPTA1-209ENST00000498708 IGDCC4Q8TDY8 1250 aa6.28□□□□□ -1.4
SPTA1-209ENST00000498708 TTC9Q92623 222 aa6.28□□□□□ -1.4
SPTA1-209ENST00000498708 NXPE3Q969Y0 559 aa6.28□□□□□ -1.4
SPTA1-209ENST00000498708 CLDN23Q96B33 292 aa6.28□□□□□ -1.4
SPTA1-209ENST00000498708 SCNM1Q9BWG6 230 aa6.28□□□□□ -1.4
SPTA1-209ENST00000498708 ZBP1Q9H171 429 aa6.28□□□□□ -1.4
SPTA1-209ENST00000498708 PSTPIP2Q9H939 334 aa6.28□□□□□ -1.4
SPTA1-209ENST00000498708 ATP6V0A4Q9HBG4 840 aa6.28□□□□□ -1.4
SPTA1-209ENST00000498708 LY9Q9HBG7 655 aa6.28□□□□□ -1.4
SPTA1-209ENST00000498708 WDR6Q9NNW5 1121 aaKnown RBP6.28□□□□□ -1.4
SPTA1-209ENST00000498708 LTB4R2Q9NPC1 389 aa6.28□□□□□ -1.4
SPTA1-209ENST00000498708 CACNA2D2Q9NY47 1150 aa6.28□□□□□ -1.4
SPTA1-209ENST00000498708 ERAP1Q9NZ08 941 aa6.28□□□□□ -1.4
SPTA1-209ENST00000498708 PCDHA6Q9UN73 950 aa6.28□□□□□ -1.4
SPTA1-209ENST00000498708 NOC2LQ9Y3T9 749 aaKnown RBP6.28□□□□□ -1.4
SPTA1-209ENST00000498708 PCDHA8Q9Y5H6 950 aa6.28□□□□□ -1.4
SPTA1-209ENST00000498708 TRPV2Q9Y5S1 764 aa6.28□□□□□ -1.4
SPTA1-209ENST00000498708 RBM8AQ9Y5S9 174 aaKnown RBP6.28□□□□□ -1.4
SPTA1-209ENST00000498708 SQORQ9Y6N5 450 aa6.28□□□□□ -1.4
SPTA1-209ENST00000498708 BAZ2BQ9UIF8 2168 aaKnown RBP6.28□□□□□ -1.4
SPTA1-209ENST00000498708 ASXL3Q9C0F0 2248 aa6.27□□□□□ -1.4
SPTA1-209ENST00000498708 FRMPD4Q14CM0 1322 aa6.27□□□□□ -1.41
SPTA1-209ENST00000498708 CCDC195A0A1B0GUA6 201 aa6.27□□□□□ -1.41
SPTA1-209ENST00000498708 DENND3A2RUS2 1198 aa6.27□□□□□ -1.41
SPTA1-209ENST00000498708 SHISA7A6NL88 538 aa6.27□□□□□ -1.41
SPTA1-209ENST00000498708 M0QZ92 97 aa6.27□□□□□ -1.41
SPTA1-209ENST00000498708 SH2B2O14492 632 aaPredicted RBP6.27□□□□□ -1.41
SPTA1-209ENST00000498708 RARAP10276 462 aa6.27□□□□□ -1.41
SPTA1-209ENST00000498708 KIF5BP33176 963 aa6.27□□□□□ -1.41
SPTA1-209ENST00000498708 PPM1AP35813 382 aa6.27□□□□□ -1.41
SPTA1-209ENST00000498708 CLCN4P51793 760 aa6.27□□□□□ -1.41
SPTA1-209ENST00000498708 GPLD1P80108 840 aa6.27□□□□□ -1.41
SPTA1-209ENST00000498708 FAM189BP81408 668 aa6.27□□□□□ -1.41
SPTA1-209ENST00000498708 FGD1P98174 961 aa6.27□□□□□ -1.41
SPTA1-209ENST00000498708 ZNF252P-AS1Q0IIN9 211 aa6.27□□□□□ -1.41
SPTA1-209ENST00000498708 MTMR1Q13613 665 aa6.27□□□□□ -1.41
SPTA1-209ENST00000498708 PRSS36Q5K4E3 855 aa6.27□□□□□ -1.41
SPTA1-209ENST00000498708 PARM1Q6UWI2 310 aa6.27□□□□□ -1.41
SPTA1-209ENST00000498708 C15orf39Q6ZRI6 1047 aa6.27□□□□□ -1.41
SPTA1-209ENST00000498708 SLC24A5Q71RS6 500 aa6.27□□□□□ -1.41
SPTA1-209ENST00000498708 HEATR3Q7Z4Q2 680 aa6.27□□□□□ -1.41
SPTA1-209ENST00000498708 WFDC8Q8IUA0 241 aa6.27□□□□□ -1.41
SPTA1-209ENST00000498708 TMEM87AQ8NBN3 555 aa6.27□□□□□ -1.41
SPTA1-209ENST00000498708 GIMAP8Q8ND71 665 aaPredicted RBP6.27□□□□□ -1.41
SPTA1-209ENST00000498708 FGF14Q92915 247 aa6.27□□□□□ -1.41
SPTA1-209ENST00000498708 GPRASP2Q96D09 838 aa6.27□□□□□ -1.41
SPTA1-209ENST00000498708 IFT43Q96FT9 208 aa6.27□□□□□ -1.41
SPTA1-209ENST00000498708 PCYT2Q99447 389 aa6.27□□□□□ -1.41
SPTA1-209ENST00000498708 HNRNPABQ99729 332 aaKnown RBP6.27□□□□□ -1.41
SPTA1-209ENST00000498708 SENP7Q9BQF6 1050 aa6.27□□□□□ -1.41
SPTA1-209ENST00000498708 FAM126AQ9BYI3 521 aaPredicted RBP6.27□□□□□ -1.41
SPTA1-209ENST00000498708 CELF4Q9BZC1 486 aaKnown RBP6.27□□□□□ -1.41
SPTA1-209ENST00000498708 OSBPL6Q9BZF3 934 aa6.27□□□□□ -1.41
SPTA1-209ENST00000498708 TMEM117Q9H0C3 514 aa6.27□□□□□ -1.41
SPTA1-209ENST00000498708 SMARCAD1Q9H4L7 1026 aa6.27□□□□□ -1.41
SPTA1-209ENST00000498708 AZI2Q9H6S1 392 aa6.27□□□□□ -1.41
SPTA1-209ENST00000498708 ZFATQ9P243 1243 aa6.27□□□□□ -1.41
SPTA1-209ENST00000498708 UBIAD1Q9Y5Z9 338 aa6.27□□□□□ -1.41
SPTA1-209ENST00000498708 CLUHO75153 1309 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 CFAP46Q8IYW2 2715 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 SGSM2O43147 1006 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 RFPL2O75678 378 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 SASH3O75995 380 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 DDAH1O94760 285 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 PRB1P04280 392 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 CAPNS1P04632 268 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 CTSAP10619 480 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 GRNP28799 593 aaKnown RBP6.26□□□□□ -1.41
SPTA1-209ENST00000498708 HOXC13P31276 330 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 ZNF76P36508 570 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 MAGEA9P43362 315 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 NOVA1P51513 510 aaKnown RBP6.26□□□□□ -1.41
SPTA1-209ENST00000498708 NRLP54845 237 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 BCAR1P56945 870 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 PRKCQQ04759 706 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 AAMPQ13685 434 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 PLCB4Q15147 1175 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 PERM1Q5SV97 790 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 ZBTB41Q5SVQ8 909 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 SHISA2Q6UWI4 295 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 KRT25Q7Z3Z0 450 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.26□□□□□ -1.41
SPTA1-209ENST00000498708 MICU3Q86XE3 530 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 C12orf50Q8NA57 414 aaPredicted RBP6.26□□□□□ -1.41
SPTA1-209ENST00000498708 BCL7CQ8WUZ0 217 aaPredicted RBP6.26□□□□□ -1.41
SPTA1-209ENST00000498708 TMEM40Q8WWA1 233 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 CDHR1Q96JP9 859 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 ZNF668Q96K58 619 aaPredicted RBP6.26□□□□□ -1.41
SPTA1-209ENST00000498708 TCEANC2Q96MN5 208 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 KLHL5Q96PQ7 755 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 LPIN3Q9BQK8 851 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 MXRA8Q9BRK3 442 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 VN1R3Q9BXE9 311 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 SPZ1Q9BXG8 430 aa6.26□□□□□ -1.41
SPTA1-209ENST00000498708 ARRDC1-AS1Q9H2J1 176 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms