RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 IRF7Q92985 503 aa5.93□□□□□ -1.46
FXN-205ENST00000498653 ZBTB10Q96DT7 871 aa5.93□□□□□ -1.46
FXN-205ENST00000498653 MSANTD3Q96H12 275 aa5.93□□□□□ -1.46
FXN-205ENST00000498653 UCN2Q96RP3 112 aa5.93□□□□□ -1.46
FXN-205ENST00000498653 MPHOSPH6Q99547 160 aaKnown RBP5.93□□□□□ -1.46
FXN-205ENST00000498653 NRSN2Q9GZP1 204 aa5.93□□□□□ -1.46
FXN-205ENST00000498653 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.93□□□□□ -1.46
FXN-205ENST00000498653 PLEKHA4Q9H4M7 779 aa5.93□□□□□ -1.46
FXN-205ENST00000498653 ANTXR1Q9H6X2 564 aa5.93□□□□□ -1.46
FXN-205ENST00000498653 PIH1D3Q9NQM4 214 aaKnown RBP5.93□□□□□ -1.46
FXN-205ENST00000498653 NYAP2Q9P242 653 aa5.93□□□□□ -1.46
FXN-205ENST00000498653 TFIP11Q9UBB9 837 aaKnown RBP5.93□□□□□ -1.46
FXN-205ENST00000498653 EBF1Q9UH73 591 aa5.93□□□□□ -1.46
FXN-205ENST00000498653 DPP7Q9UHL4 492 aa5.93□□□□□ -1.46
FXN-205ENST00000498653 PILRBQ9UKJ0 227 aa5.93□□□□□ -1.46
FXN-205ENST00000498653 SLC6A14Q9UN76 642 aa5.93□□□□□ -1.46
FXN-205ENST00000498653 DENND3A2RUS2 1198 aa5.92□□□□□ -1.46
FXN-205ENST00000498653 SLC38A8A6NNN8 435 aa5.92□□□□□ -1.46
FXN-205ENST00000498653 ZNF862O60290 1169 aa5.92□□□□□ -1.46
FXN-205ENST00000498653 LILRA1O75019 489 aa5.92□□□□□ -1.46
FXN-205ENST00000498653 ZC3H11AO75152 810 aaKnown RBP eCLIP5.92□□□□□ -1.46
FXN-205ENST00000498653 CDC45O75419 566 aa5.92□□□□□ -1.46
FXN-205ENST00000498653 CLDN1O95832 211 aa5.92□□□□□ -1.46
FXN-205ENST00000498653 ZFYP08048 801 aaPredicted RBP5.92□□□□□ -1.46
FXN-205ENST00000498653 SERPINF2P08697 491 aa5.92□□□□□ -1.46
FXN-205ENST00000498653 RASA1P20936 1047 aa5.92□□□□□ -1.46
FXN-205ENST00000498653 GDI1P31150 447 aa5.92□□□□□ -1.46
FXN-205ENST00000498653 ATP1A2P50993 1020 aa5.92□□□□□ -1.46
FXN-205ENST00000498653 RNASELQ05823 741 aaKnown RBP5.92□□□□□ -1.46
FXN-205ENST00000498653 GFPT1Q06210 699 aaPredicted RBP5.92□□□□□ -1.46
FXN-205ENST00000498653 TMEM62Q0P6H9 643 aa5.92□□□□□ -1.46
FXN-205ENST00000498653 NCOA4Q13772 614 aa5.92□□□□□ -1.46
FXN-205ENST00000498653 CELF3Q5SZQ8 465 aaKnown RBP5.92□□□□□ -1.46
FXN-205ENST00000498653 MARCH8Q5T0T0 291 aa5.92□□□□□ -1.46
FXN-205ENST00000498653 SYDE2Q5VT97 1194 aa5.92□□□□□ -1.46
FXN-205ENST00000498653 MRPL14Q6P1L8 145 aaKnown RBP5.92□□□□□ -1.46
FXN-205ENST00000498653 TMED8Q6PL24 325 aaPredicted RBP5.92□□□□□ -1.46
FXN-205ENST00000498653 CASC1Q6TDU7 716 aa5.92□□□□□ -1.46
FXN-205ENST00000498653 DHRS13Q6UX07 377 aa5.92□□□□□ -1.46
FXN-205ENST00000498653 VITQ6UXI7 678 aa5.92□□□□□ -1.46
FXN-205ENST00000498653 RNF207Q6ZRF8 634 aa5.92□□□□□ -1.46
FXN-205ENST00000498653 C16orf86Q6ZW13 317 aa5.92□□□□□ -1.46
FXN-205ENST00000498653 C11orf74Q86VG3 221 aa5.92□□□□□ -1.46
FXN-205ENST00000498653 TICAM2Q86XR7 235 aa5.92□□□□□ -1.46
FXN-205ENST00000498653 ZNF248Q8NDW4 579 aa5.92□□□□□ -1.46
FXN-205ENST00000498653 GMCL1P1Q8NEA9 526 aa5.92□□□□□ -1.46
FXN-205ENST00000498653 SSC4DQ8WTU2 575 aa5.92□□□□□ -1.46
FXN-205ENST00000498653 TRMT61BQ9BVS5 477 aaKnown RBP5.92□□□□□ -1.46
FXN-205ENST00000498653 DCP1AQ9NPI6 582 aaPredicted RBP5.92□□□□□ -1.46
FXN-205ENST00000498653 GPRC5CQ9NQ84 441 aa5.92□□□□□ -1.46
FXN-205ENST00000498653 DIAPH3Q9NSV4 1193 aa5.92□□□□□ -1.46
FXN-205ENST00000498653 TUBE1Q9UJT0 475 aa5.92□□□□□ -1.46
FXN-205ENST00000498653 RBM19Q9Y4C8 960 aaKnown RBP5.92□□□□□ -1.46
FXN-205ENST00000498653 MAFBQ9Y5Q3 323 aaPredicted RBP5.92□□□□□ -1.46
FXN-205ENST00000498653 MRVI1Q9Y6F6 885 aa5.92□□□□□ -1.46
FXN-205ENST00000498653 KDM3AQ9Y4C1 1321 aa5.92□□□□□ -1.46
FXN-205ENST00000498653 RYR3Q15413 4870 aa5.91□□□□□ -1.46
FXN-205ENST00000498653 ANO9A1A5B4 782 aa5.91□□□□□ -1.46
FXN-205ENST00000498653 MYBPHLA2RUH7 354 aa5.91□□□□□ -1.46
FXN-205ENST00000498653 SPECC1L-ADORA2AF8WAN1 911 aa5.91□□□□□ -1.46
FXN-205ENST00000498653 RNF113AO15541 343 aaKnown RBP5.91□□□□□ -1.46
FXN-205ENST00000498653 TGM5O43548 720 aa5.91□□□□□ -1.46
FXN-205ENST00000498653 AGFG2O95081 481 aa5.91□□□□□ -1.46
FXN-205ENST00000498653 GGPS1O95749 300 aa5.91□□□□□ -1.46
FXN-205ENST00000498653 BMP2P12643 396 aa5.91□□□□□ -1.46
FXN-205ENST00000498653 PDE6AP16499 860 aa5.91□□□□□ -1.46
FXN-205ENST00000498653 UBA1P22314 1058 aaKnown RBP5.91□□□□□ -1.46
FXN-205ENST00000498653 ITPKAP23677 461 aa5.91□□□□□ -1.46
FXN-205ENST00000498653 CHMLP26374 656 aa5.91□□□□□ -1.46
FXN-205ENST00000498653 HOXD12P35452 270 aa5.91□□□□□ -1.46
FXN-205ENST00000498653 SP2Q02086 613 aa5.91□□□□□ -1.46
FXN-205ENST00000498653 NFX1Q12986 1120 aaKnown RBP5.91□□□□□ -1.46
FXN-205ENST00000498653 DSC3Q14574 896 aa5.91□□□□□ -1.46
FXN-205ENST00000498653 PON2Q15165 354 aa5.91□□□□□ -1.46
FXN-205ENST00000498653 SKIDA1Q1XH10 827 aa5.91□□□□□ -1.46
FXN-205ENST00000498653 SLC9C2Q5TAH2 1124 aa5.91□□□□□ -1.46
FXN-205ENST00000498653 LILRA6Q6PI73 481 aa5.91□□□□□ -1.46
FXN-205ENST00000498653 C1orf228Q6PIY5 440 aa5.91□□□□□ -1.46
FXN-205ENST00000498653 MAMDC2Q7Z304 686 aaPredicted RBP5.91□□□□□ -1.46
FXN-205ENST00000498653 FAM160B2Q86V87 743 aa5.91□□□□□ -1.46
FXN-205ENST00000498653 TMPRSS12Q86WS5 348 aa5.91□□□□□ -1.46
FXN-205ENST00000498653 LINC00528Q8N1L1 170 aa5.91□□□□□ -1.46
FXN-205ENST00000498653 SDR42E1Q8WUS8 393 aa5.91□□□□□ -1.46
FXN-205ENST00000498653 TMEM40Q8WWA1 233 aa5.91□□□□□ -1.46
FXN-205ENST00000498653 RUFY2Q8WXA3 655 aa5.91□□□□□ -1.46
FXN-205ENST00000498653 RPS6KC1Q96S38 1066 aa5.91□□□□□ -1.46
FXN-205ENST00000498653 TPSD1Q9BZJ3 242 aa5.91□□□□□ -1.46
FXN-205ENST00000498653 PRDM16Q9HAZ2 1276 aa5.91□□□□□ -1.46
FXN-205ENST00000498653 SENP2Q9HC62 589 aa5.91□□□□□ -1.46
FXN-205ENST00000498653 MRPL17Q9NRX2 175 aaKnown RBP5.91□□□□□ -1.46
FXN-205ENST00000498653 HCFC1R1Q9NWW0 138 aa5.91□□□□□ -1.46
FXN-205ENST00000498653 PLAAQ9Y263 795 aa5.91□□□□□ -1.46
FXN-205ENST00000498653 NBEAL2Q6ZNJ1 2754 aa5.91□□□□□ -1.46
FXN-205ENST00000498653 CCDC171Q6TFL3 1326 aa5.91□□□□□ -1.46
FXN-205ENST00000498653 CYP2D7A0A087X1C5 515 aa5.9□□□□□ -1.46
FXN-205ENST00000498653 IGKV6D-41A0A0C4DH26 115 aa5.9□□□□□ -1.46
FXN-205ENST00000498653 EIF5BO60841 1220 aaKnown RBP5.9□□□□□ -1.46
FXN-205ENST00000498653 FAM155BO75949 473 aa5.9□□□□□ -1.46
FXN-205ENST00000498653 APBB3O95704 486 aa5.9□□□□□ -1.46
FXN-205ENST00000498653 GALTP07902 379 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms