RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 F5P12259 2224 aa16.17■□□□□ 0.18
TRAF4-212ENST00000498540 ACACBO00763 2458 aa16.16■□□□□ 0.18
TRAF4-212ENST00000498540 SMIM28A0A1B0GU29 152 aa16.16■□□□□ 0.18
TRAF4-212ENST00000498540 ARHGEF35A5YM69 484 aa16.16■□□□□ 0.18
TRAF4-212ENST00000498540 PRRG1O14668 218 aa16.16■□□□□ 0.18
TRAF4-212ENST00000498540 TRAPPC3O43617 180 aa16.16■□□□□ 0.18
TRAF4-212ENST00000498540 KRT37O76014 449 aa16.16■□□□□ 0.18
TRAF4-212ENST00000498540 ABLIM3O94929 683 aa16.16■□□□□ 0.18
TRAF4-212ENST00000498540 LRG1P02750 347 aa16.16■□□□□ 0.18
TRAF4-212ENST00000498540 TDGF1P13385 188 aa16.16■□□□□ 0.18
TRAF4-212ENST00000498540 PTPN2P17706 415 aa16.16■□□□□ 0.18
TRAF4-212ENST00000498540 CCR2P41597 374 aa16.16■□□□□ 0.18
TRAF4-212ENST00000498540 LMNB2Q03252 620 aa16.16■□□□□ 0.18
TRAF4-212ENST00000498540 PPP2R5AQ15172 486 aa16.16■□□□□ 0.18
TRAF4-212ENST00000498540 ME3Q16798 604 aa16.16■□□□□ 0.18
TRAF4-212ENST00000498540 FAM78AQ5JUQ0 283 aa16.16■□□□□ 0.18
TRAF4-212ENST00000498540 NSUN7Q8NE18 718 aaKnown RBP16.16■□□□□ 0.18
TRAF4-212ENST00000498540 GTF3C6Q969F1 213 aa16.16■□□□□ 0.18
TRAF4-212ENST00000498540 PRR5-ARHGAP8B1AHC4 643 aa16.15■□□□□ 0.18
TRAF4-212ENST00000498540 TBC1D4O60343 1298 aa16.15■□□□□ 0.18
TRAF4-212ENST00000498540 JAK2O60674 1132 aa16.15■□□□□ 0.18
TRAF4-212ENST00000498540 SEC24AO95486 1093 aa16.15■□□□□ 0.18
TRAF4-212ENST00000498540 SDHBP21912 280 aa16.15■□□□□ 0.18
TRAF4-212ENST00000498540 RPA1P27694 616 aa16.15■□□□□ 0.18
TRAF4-212ENST00000498540 ARPP19P56211 112 aa16.15■□□□□ 0.18
TRAF4-212ENST00000498540 ARHGAP8P85298 464 aa16.15■□□□□ 0.18
TRAF4-212ENST00000498540 LPAL2Q16609 132 aa16.15■□□□□ 0.18
TRAF4-212ENST00000498540 FAM126AQ9BYI3 521 aaPredicted RBP16.15■□□□□ 0.18
TRAF4-212ENST00000498540 CHRDQ9H2X0 955 aa16.15■□□□□ 0.18
TRAF4-212ENST00000498540 BRD9Q9H8M2 597 aa16.15■□□□□ 0.18
TRAF4-212ENST00000498540 ZFP14Q9HCL3 533 aa16.15■□□□□ 0.18
TRAF4-212ENST00000498540 CITO14578 2027 aa16.14■□□□□ 0.17
TRAF4-212ENST00000498540 PDCD11Q14690 1871 aaKnown RBP16.14■□□□□ 0.17
TRAF4-212ENST00000498540 DCDC2BA2VCK2 349 aa16.14■□□□□ 0.17
TRAF4-212ENST00000498540 PODXLO00592 558 aa16.14■□□□□ 0.17
TRAF4-212ENST00000498540 ATF2P15336 505 aa16.14■□□□□ 0.17
TRAF4-212ENST00000498540 ELF1P32519 619 aa16.14■□□□□ 0.17
TRAF4-212ENST00000498540 EFNA5P52803 228 aa16.14■□□□□ 0.17
TRAF4-212ENST00000498540 OSTNP61366 133 aa16.14■□□□□ 0.17
TRAF4-212ENST00000498540 VITQ6UXI7 678 aa16.14■□□□□ 0.17
TRAF4-212ENST00000498540 TCEAL8Q8IYN2 117 aa16.14■□□□□ 0.17
TRAF4-212ENST00000498540 IFT74Q96LB3 600 aa16.14■□□□□ 0.17
TRAF4-212ENST00000498540 ZSWIM3Q96MP5 696 aa16.14■□□□□ 0.17
TRAF4-212ENST00000498540 ZMAT2Q96NC0 199 aaKnown RBP16.14■□□□□ 0.17
TRAF4-212ENST00000498540 ASB16Q96NS5 453 aa16.14■□□□□ 0.17
TRAF4-212ENST00000498540 TRMT61BQ9BVS5 477 aaKnown RBP16.14■□□□□ 0.17
TRAF4-212ENST00000498540 CDT1Q9H211 546 aa16.14■□□□□ 0.17
TRAF4-212ENST00000498540 CYP4F11Q9HBI6 524 aa16.14■□□□□ 0.17
TRAF4-212ENST00000498540 GMEB2Q9UKD1 530 aa16.14■□□□□ 0.17
TRAF4-212ENST00000498540 INSL5Q9Y5Q6 135 aa16.14■□□□□ 0.17
TRAF4-212ENST00000498540 NCANO14594 1321 aa16.14■□□□□ 0.17
TRAF4-212ENST00000498540 MAN2B1O00754 1011 aa16.13■□□□□ 0.17
TRAF4-212ENST00000498540 GRM5P41594 1212 aa16.13■□□□□ 0.17
TRAF4-212ENST00000498540 SPEM2Q0P670 501 aa16.13■□□□□ 0.17
TRAF4-212ENST00000498540 ANKRD1Q15327 319 aa16.13■□□□□ 0.17
TRAF4-212ENST00000498540 ECM1Q16610 540 aa16.13■□□□□ 0.17
TRAF4-212ENST00000498540 XKR4Q5GH76 650 aa16.13■□□□□ 0.17
TRAF4-212ENST00000498540 ALKAL1Q6UXT8 129 aa16.13■□□□□ 0.17
TRAF4-212ENST00000498540 PDZD4Q76G19 769 aaPredicted RBP16.13■□□□□ 0.17
TRAF4-212ENST00000498540 MAP4K3Q8IVH8 894 aa16.13■□□□□ 0.17
TRAF4-212ENST00000498540 HS6ST3Q8IZP7 471 aa16.13■□□□□ 0.17
TRAF4-212ENST00000498540 ERMNQ8TAM6 284 aa16.13■□□□□ 0.17
TRAF4-212ENST00000498540 RTKNQ9BST9 563 aa16.13■□□□□ 0.17
TRAF4-212ENST00000498540 ZNF334Q9HCZ1 680 aaPredicted RBP16.13■□□□□ 0.17
TRAF4-212ENST00000498540 FBXL5Q9UKA1 691 aa16.13■□□□□ 0.17
TRAF4-212ENST00000498540 TNFSF13BQ9Y275 285 aa16.13■□□□□ 0.17
TRAF4-212ENST00000498540 ZNF197O14709 1029 aa16.12■□□□□ 0.17
TRAF4-212ENST00000498540 SYN3O14994 580 aa16.12■□□□□ 0.17
TRAF4-212ENST00000498540 MOSPD3O75425 235 aa16.12■□□□□ 0.17
TRAF4-212ENST00000498540 MICAL2O94851 1124 aa16.12■□□□□ 0.17
TRAF4-212ENST00000498540 OR52Z1P0C646 297 aa16.12■□□□□ 0.17
TRAF4-212ENST00000498540 GDI1P31150 447 aa16.12■□□□□ 0.17
TRAF4-212ENST00000498540 YARSP54577 528 aaKnown RBP16.12■□□□□ 0.17
TRAF4-212ENST00000498540 GUCY1B3Q02153 619 aa16.12■□□□□ 0.17
TRAF4-212ENST00000498540 TRIM29Q14134 588 aa16.12■□□□□ 0.17
TRAF4-212ENST00000498540 MRPL58Q14197 206 aaKnown RBP16.12■□□□□ 0.17
TRAF4-212ENST00000498540 ZNF568Q3ZCX4 644 aa16.12■□□□□ 0.17
TRAF4-212ENST00000498540 APBB1IPQ7Z5R6 666 aaPredicted RBP16.12■□□□□ 0.17
TRAF4-212ENST00000498540 FAM3CQ92520 227 aa16.12■□□□□ 0.17
TRAF4-212ENST00000498540 KIFAP3Q92845 792 aa16.12■□□□□ 0.17
TRAF4-212ENST00000498540 SMARCD2Q92925 531 aa16.12■□□□□ 0.17
TRAF4-212ENST00000498540 IRF7Q92985 503 aa16.12■□□□□ 0.17
TRAF4-212ENST00000498540 C18orf25Q96B23 403 aaPredicted RBP16.12■□□□□ 0.17
TRAF4-212ENST00000498540 ACO2Q99798 780 aaKnown RBP16.12■□□□□ 0.17
TRAF4-212ENST00000498540 CCDC94Q9BW85 323 aaPredicted RBP16.12■□□□□ 0.17
TRAF4-212ENST00000498540 BHMT2Q9H2M3 363 aa16.12■□□□□ 0.17
TRAF4-212ENST00000498540 PTPRHQ9HD43 1115 aa16.12■□□□□ 0.17
TRAF4-212ENST00000498540 TOPORSQ9NS56 1045 aaPredicted RBP16.12■□□□□ 0.17
TRAF4-212ENST00000498540 SLC38A7Q9NVC3 462 aa16.12■□□□□ 0.17
TRAF4-212ENST00000498540 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.12■□□□□ 0.17
TRAF4-212ENST00000498540 PIAS3Q9Y6X2 628 aa16.12■□□□□ 0.17
TRAF4-212ENST00000498540 PHLPP2Q6ZVD8 1323 aa16.12■□□□□ 0.17
TRAF4-212ENST00000498540 K7ERI5 159 aa16.11■□□□□ 0.17
TRAF4-212ENST00000498540 MEFVO15553 781 aaPredicted RBP16.11■□□□□ 0.17
TRAF4-212ENST00000498540 GJA1P17302 382 aa16.11■□□□□ 0.17
TRAF4-212ENST00000498540 PSMC3P17980 439 aa16.11■□□□□ 0.17
TRAF4-212ENST00000498540 VIPR2P41587 438 aa16.11■□□□□ 0.17
TRAF4-212ENST00000498540 NRLP54845 237 aa16.11■□□□□ 0.17
TRAF4-212ENST00000498540 ST3GAL1Q11201 340 aa16.11■□□□□ 0.17
TRAF4-212ENST00000498540 ZNF174Q15697 407 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms