RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 SPDYE4A6NLX3 237 aa13.91□□□□□ -0.18
HSPG2-213ENST00000498495 EIF3DO15371 548 aaKnown RBP eCLIP13.91□□□□□ -0.18
HSPG2-213ENST00000498495 ZNF202O95125 648 aa13.91□□□□□ -0.18
HSPG2-213ENST00000498495 MYL1P05976 194 aa13.91□□□□□ -0.18
HSPG2-213ENST00000498495 EPCAMP16422 314 aa13.91□□□□□ -0.18
HSPG2-213ENST00000498495 IGFBP6P24592 240 aaPredicted RBP13.91□□□□□ -0.18
HSPG2-213ENST00000498495 BRCC3P46736 316 aa13.91□□□□□ -0.18
HSPG2-213ENST00000498495 CLCN4P51793 760 aa13.91□□□□□ -0.18
HSPG2-213ENST00000498495 CREMQ03060 361 aa13.91□□□□□ -0.18
HSPG2-213ENST00000498495 SMAD2Q15796 467 aaKnown RBP13.91□□□□□ -0.18
HSPG2-213ENST00000498495 RTP2Q5QGT7 225 aa13.91□□□□□ -0.18
HSPG2-213ENST00000498495 CES5AQ6NT32 575 aa13.91□□□□□ -0.18
HSPG2-213ENST00000498495 ARMCX5Q6P1M9 558 aa13.91□□□□□ -0.18
HSPG2-213ENST00000498495 PDXDC1Q6P996 788 aa13.91□□□□□ -0.18
HSPG2-213ENST00000498495 SYCE2Q6PIF2 218 aa13.91□□□□□ -0.18
HSPG2-213ENST00000498495 PRSS55Q6UWB4 352 aaPredicted RBP13.91□□□□□ -0.18
HSPG2-213ENST00000498495 CD300LGQ6UXG3 332 aa13.91□□□□□ -0.18
HSPG2-213ENST00000498495 PALB2Q86YC2 1186 aa13.91□□□□□ -0.18
HSPG2-213ENST00000498495 SMRP1Q8NCR6 262 aa13.91□□□□□ -0.18
HSPG2-213ENST00000498495 GLIS3Q8NEA6 775 aa13.91□□□□□ -0.18
HSPG2-213ENST00000498495 BEST2Q8NFU1 509 aa13.91□□□□□ -0.18
HSPG2-213ENST00000498495 LNX1Q8TBB1 728 aaPredicted RBP13.91□□□□□ -0.18
HSPG2-213ENST00000498495 NOC3LQ8WTT2 800 aaKnown RBP13.91□□□□□ -0.18
HSPG2-213ENST00000498495 CCDC34Q96HJ3 373 aa13.91□□□□□ -0.18
HSPG2-213ENST00000498495 FAM213AQ9BRX8 229 aa13.91□□□□□ -0.18
HSPG2-213ENST00000498495 PCIF1Q9H4Z3 704 aa13.91□□□□□ -0.18
HSPG2-213ENST00000498495 SLC39A2Q9NP94 309 aa13.91□□□□□ -0.18
HSPG2-213ENST00000498495 FNIP2Q9P278 1114 aa13.91□□□□□ -0.18
HSPG2-213ENST00000498495 TUBGCP4Q9UGJ1 667 aa13.91□□□□□ -0.18
HSPG2-213ENST00000498495 DPP7Q9UHL4 492 aa13.91□□□□□ -0.18
HSPG2-213ENST00000498495 CIZ1Q9ULV3 898 aaPredicted RBP13.91□□□□□ -0.18
HSPG2-213ENST00000498495 KIAA0391O15091 583 aaKnown RBP13.9□□□□□ -0.18
HSPG2-213ENST00000498495 LRPAP1P30533 357 aa13.9□□□□□ -0.18
HSPG2-213ENST00000498495 ITIH3Q06033 890 aa13.9□□□□□ -0.18
HSPG2-213ENST00000498495 EHHADHQ08426 723 aa13.9□□□□□ -0.18
HSPG2-213ENST00000498495 PSMD2Q13200 908 aa13.9□□□□□ -0.18
HSPG2-213ENST00000498495 PSMD5Q16401 504 aa13.9□□□□□ -0.18
HSPG2-213ENST00000498495 JADE1Q6IE81 842 aa13.9□□□□□ -0.18
HSPG2-213ENST00000498495 ELMSAN1Q6PJG2 1045 aa13.9□□□□□ -0.18
HSPG2-213ENST00000498495 CRELD2Q6UXH1 353 aaPredicted RBP13.9□□□□□ -0.18
HSPG2-213ENST00000498495 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.9□□□□□ -0.18
HSPG2-213ENST00000498495 KRBA2Q6ZNG9 492 aa13.9□□□□□ -0.18
HSPG2-213ENST00000498495 EPM2AIP1Q7L775 607 aaPredicted RBP13.9□□□□□ -0.18
HSPG2-213ENST00000498495 GLYCTKQ8IVS8 523 aa13.9□□□□□ -0.18
HSPG2-213ENST00000498495 C3orf58Q8NDZ4 430 aa13.9□□□□□ -0.18
HSPG2-213ENST00000498495 PIK3R5Q8WYR1 880 aa13.9□□□□□ -0.18
HSPG2-213ENST00000498495 CCDC47Q96A33 483 aaKnown RBP13.9□□□□□ -0.18
HSPG2-213ENST00000498495 SAAL1Q96ER3 474 aa13.9□□□□□ -0.18
HSPG2-213ENST00000498495 FBXL18Q96ME1 805 aa13.9□□□□□ -0.18
HSPG2-213ENST00000498495 S1PR5Q9H228 398 aa13.9□□□□□ -0.18
HSPG2-213ENST00000498495 EXOC1Q9NV70 894 aa13.9□□□□□ -0.18
HSPG2-213ENST00000498495 DZANK1Q9NVP4 752 aa13.9□□□□□ -0.18
HSPG2-213ENST00000498495 PRKAG3Q9UGI9 489 aa13.9□□□□□ -0.18
HSPG2-213ENST00000498495 DERAQ9Y315 318 aa13.9□□□□□ -0.18
HSPG2-213ENST00000498495 USP15Q9Y4E8 981 aaPredicted RBP13.9□□□□□ -0.18
HSPG2-213ENST00000498495 CITO14578 2027 aa13.9□□□□□ -0.18
HSPG2-213ENST00000498495 REV3LO60673 3130 aa13.89□□□□□ -0.19
HSPG2-213ENST00000498495 GOLGA8IPA6NC78 632 aa13.89□□□□□ -0.19
HSPG2-213ENST00000498495 GOLGA8JA6NMD2 632 aa13.89□□□□□ -0.19
HSPG2-213ENST00000498495 I3L4J1 428 aa13.89□□□□□ -0.19
HSPG2-213ENST00000498495 TNFRSF10AO00220 468 aa13.89□□□□□ -0.19
HSPG2-213ENST00000498495 KLRC4O43908 158 aa13.89□□□□□ -0.19
HSPG2-213ENST00000498495 EXTL3O43909 919 aa13.89□□□□□ -0.19
HSPG2-213ENST00000498495 IL18RAPO95256 599 aa13.89□□□□□ -0.19
HSPG2-213ENST00000498495 GLUD1P00367 558 aa13.89□□□□□ -0.19
HSPG2-213ENST00000498495 RPL17P18621 184 aaKnown RBP13.89□□□□□ -0.19
HSPG2-213ENST00000498495 FGFR3P22607 806 aa13.89□□□□□ -0.19
HSPG2-213ENST00000498495 SSTR3P32745 418 aaPredicted RBP13.89□□□□□ -0.19
HSPG2-213ENST00000498495 MCM4P33991 863 aa13.89□□□□□ -0.19
HSPG2-213ENST00000498495 TMEM132DQ14C87 1099 aa13.89□□□□□ -0.19
HSPG2-213ENST00000498495 KMT5BQ4FZB7 885 aa13.89□□□□□ -0.19
HSPG2-213ENST00000498495 SPATA1Q5VX52 437 aa13.89□□□□□ -0.19
HSPG2-213ENST00000498495 KANK3Q6NY19 840 aa13.89□□□□□ -0.19
HSPG2-213ENST00000498495 NELFCDQ8IXH7 590 aa13.89□□□□□ -0.19
HSPG2-213ENST00000498495 GPD1LQ8N335 351 aa13.89□□□□□ -0.19
HSPG2-213ENST00000498495 C12orf76Q8N812 135 aaPredicted RBP13.89□□□□□ -0.19
HSPG2-213ENST00000498495 SCFD1Q8WVM8 642 aa13.89□□□□□ -0.19
HSPG2-213ENST00000498495 CBWD1Q9BRT8 395 aa13.89□□□□□ -0.19
HSPG2-213ENST00000498495 ADAM7Q9H2U9 754 aa13.89□□□□□ -0.19
HSPG2-213ENST00000498495 GOLPH3LQ9H4A5 285 aa13.89□□□□□ -0.19
HSPG2-213ENST00000498495 C2CD2Q9Y426 696 aa13.89□□□□□ -0.19
HSPG2-213ENST00000498495 SYN3O14994 580 aa13.88□□□□□ -0.19
HSPG2-213ENST00000498495 C1RP00736 705 aa13.88□□□□□ -0.19
HSPG2-213ENST00000498495 RPN1P04843 607 aaKnown RBP13.88□□□□□ -0.19
HSPG2-213ENST00000498495 NFICP08651 508 aa13.88□□□□□ -0.19
HSPG2-213ENST00000498495 SPATA31D3P0C874 917 aa13.88□□□□□ -0.19
HSPG2-213ENST00000498495 TKTP29401 623 aaKnown RBP13.88□□□□□ -0.19
HSPG2-213ENST00000498495 HOXD13P35453 343 aa13.88□□□□□ -0.19
HSPG2-213ENST00000498495 GUCY2FP51841 1108 aa13.88□□□□□ -0.19
HSPG2-213ENST00000498495 SNRPFP62306 86 aaKnown RBP13.88□□□□□ -0.19
HSPG2-213ENST00000498495 STK4Q13043 487 aa13.88□□□□□ -0.19
HSPG2-213ENST00000498495 KNOP1Q1ED39 458 aaKnown RBP13.88□□□□□ -0.19
HSPG2-213ENST00000498495 ATAT1Q5SQI0 421 aa13.88□□□□□ -0.19
HSPG2-213ENST00000498495 RARS2Q5T160 578 aaKnown RBP13.88□□□□□ -0.19
HSPG2-213ENST00000498495 SPATA31D4Q6ZUB0 917 aa13.88□□□□□ -0.19
HSPG2-213ENST00000498495 ANKS3Q6ZW76 656 aa13.88□□□□□ -0.19
HSPG2-213ENST00000498495 HS2ST1Q7LGA3 356 aa13.88□□□□□ -0.19
HSPG2-213ENST00000498495 NT5DC4Q86YG4 428 aa13.88□□□□□ -0.19
HSPG2-213ENST00000498495 ADHFE1Q8IWW8 467 aa13.88□□□□□ -0.19
HSPG2-213ENST00000498495 GJD3Q8N144 294 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms