RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 KIF4AO95239 1232 aa12.24□□□□□ -0.45
ERCC8-208ENST00000497892 ADRB2P07550 413 aa12.24□□□□□ -0.45
ERCC8-208ENST00000497892 CTSAP10619 480 aa12.24□□□□□ -0.45
ERCC8-208ENST00000497892 PPP2R3AQ06190 1150 aa12.24□□□□□ -0.45
ERCC8-208ENST00000497892 SOX4Q06945 474 aaPredicted RBP12.24□□□□□ -0.45
ERCC8-208ENST00000497892 HYAL1Q12794 435 aa12.24□□□□□ -0.45
ERCC8-208ENST00000497892 DPYDQ12882 1025 aa12.24□□□□□ -0.45
ERCC8-208ENST00000497892 SNW1Q13573 536 aaKnown RBP12.24□□□□□ -0.45
ERCC8-208ENST00000497892 SMC1AQ14683 1233 aaKnown RBP12.24□□□□□ -0.45
ERCC8-208ENST00000497892 POSTNQ15063 836 aa12.24□□□□□ -0.45
ERCC8-208ENST00000497892 BMT2Q1RMZ1 405 aa12.24□□□□□ -0.45
ERCC8-208ENST00000497892 PLPP4Q5VZY2 271 aa12.24□□□□□ -0.45
ERCC8-208ENST00000497892 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.24□□□□□ -0.45
ERCC8-208ENST00000497892 SYCP3Q8IZU3 236 aa12.24□□□□□ -0.45
ERCC8-208ENST00000497892 VPS52Q8N1B4 723 aa12.24□□□□□ -0.45
ERCC8-208ENST00000497892 ENGASEQ8NFI3 743 aa12.24□□□□□ -0.45
ERCC8-208ENST00000497892 ZNF507Q8TCN5 953 aa12.24□□□□□ -0.45
ERCC8-208ENST00000497892 MICAL1Q8TDZ2 1067 aa12.24□□□□□ -0.45
ERCC8-208ENST00000497892 SCFD1Q8WVM8 642 aa12.24□□□□□ -0.45
ERCC8-208ENST00000497892 POMGNT1Q8WZA1 660 aa12.24□□□□□ -0.45
ERCC8-208ENST00000497892 PABPC5Q96DU9 382 aaKnown RBP12.24□□□□□ -0.45
ERCC8-208ENST00000497892 UROC1Q96N76 676 aa12.24□□□□□ -0.45
ERCC8-208ENST00000497892 EXOC1Q9NV70 894 aa12.24□□□□□ -0.45
ERCC8-208ENST00000497892 ADAM28Q9UKQ2 775 aa12.24□□□□□ -0.45
ERCC8-208ENST00000497892 AGO2Q9UKV8 859 aaKnown RBP12.24□□□□□ -0.45
ERCC8-208ENST00000497892 COG5Q9UP83 839 aa12.24□□□□□ -0.45
ERCC8-208ENST00000497892 IRAK3Q9Y616 596 aa12.24□□□□□ -0.45
ERCC8-208ENST00000497892 VWA8A3KMH1 1905 aa12.23□□□□□ -0.45
ERCC8-208ENST00000497892 FSD2A1L4K1 749 aa12.23□□□□□ -0.45
ERCC8-208ENST00000497892 HIDE1A8MVS5 230 aa12.23□□□□□ -0.45
ERCC8-208ENST00000497892 TMEM189-UBE2V1I3L0A0 370 aa12.23□□□□□ -0.45
ERCC8-208ENST00000497892 NCK2O43639 380 aa12.23□□□□□ -0.45
ERCC8-208ENST00000497892 SOD2P04179 222 aa12.23□□□□□ -0.45
ERCC8-208ENST00000497892 RPN1P04843 607 aaKnown RBP12.23□□□□□ -0.45
ERCC8-208ENST00000497892 GARTP22102 1010 aa12.23□□□□□ -0.45
ERCC8-208ENST00000497892 NRIP1P48552 1158 aa12.23□□□□□ -0.45
ERCC8-208ENST00000497892 ACOT2P49753 483 aa12.23□□□□□ -0.45
ERCC8-208ENST00000497892 POU5F1Q01860 360 aaKnown RBP12.23□□□□□ -0.45
ERCC8-208ENST00000497892 PTPN14Q15678 1187 aa12.23□□□□□ -0.45
ERCC8-208ENST00000497892 UPP1Q16831 310 aa12.23□□□□□ -0.45
ERCC8-208ENST00000497892 CTC1Q2NKJ3 1217 aa12.23□□□□□ -0.45
ERCC8-208ENST00000497892 KMT5BQ4FZB7 885 aa12.23□□□□□ -0.45
ERCC8-208ENST00000497892 KANK3Q6NY19 840 aa12.23□□□□□ -0.45
ERCC8-208ENST00000497892 FUT10Q6P4F1 479 aa12.23□□□□□ -0.45
ERCC8-208ENST00000497892 TMC7Q7Z402 723 aa12.23□□□□□ -0.45
ERCC8-208ENST00000497892 MRPL43Q8N983 215 aaKnown RBP12.23□□□□□ -0.45
ERCC8-208ENST00000497892 KIAA0895Q8NCT3 520 aa12.23□□□□□ -0.45
ERCC8-208ENST00000497892 RABGGTAQ92696 567 aa12.23□□□□□ -0.45
ERCC8-208ENST00000497892 HLA-CQ95604 372 aa12.23□□□□□ -0.45
ERCC8-208ENST00000497892 CCDC34Q96HJ3 373 aa12.23□□□□□ -0.45
ERCC8-208ENST00000497892 TSPAN18Q96SJ8 248 aa12.23□□□□□ -0.45
ERCC8-208ENST00000497892 CBWD1Q9BRT8 395 aa12.23□□□□□ -0.45
ERCC8-208ENST00000497892 HERC2P3Q9BVR0 1158 aa12.23□□□□□ -0.45
ERCC8-208ENST00000497892 UBE2ZQ9H832 354 aaPredicted RBP12.23□□□□□ -0.45
ERCC8-208ENST00000497892 RPF1Q9H9Y2 349 aaKnown RBP12.23□□□□□ -0.45
ERCC8-208ENST00000497892 GOLGA2P5Q9HBQ8 144 aa12.23□□□□□ -0.45
ERCC8-208ENST00000497892 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.23□□□□□ -0.45
ERCC8-208ENST00000497892 VCANP13611 3396 aa12.23□□□□□ -0.45
ERCC8-208ENST00000497892 SF3B1O75533 1304 aaKnown RBP eCLIP12.22□□□□□ -0.452e-11■■■■■ 62
ERCC8-208ENST00000497892 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.22□□□□□ -0.45
ERCC8-208ENST00000497892 C2orf71A6NGG8 1288 aa12.22□□□□□ -0.45
ERCC8-208ENST00000497892 RNF40O75150 1001 aa12.22□□□□□ -0.45
ERCC8-208ENST00000497892 URODP06132 367 aa12.22□□□□□ -0.45
ERCC8-208ENST00000497892 GTF2F1P35269 517 aaKnown RBP eCLIP12.22□□□□□ -0.45
ERCC8-208ENST00000497892 CLCNKBP51801 687 aa12.22□□□□□ -0.45
ERCC8-208ENST00000497892 STK4Q13043 487 aa12.22□□□□□ -0.45
ERCC8-208ENST00000497892 PSMD2Q13200 908 aa12.22□□□□□ -0.45
ERCC8-208ENST00000497892 BMS1Q14692 1282 aaKnown RBP12.22□□□□□ -0.45
ERCC8-208ENST00000497892 ZBTB6Q15916 424 aa12.22□□□□□ -0.45
ERCC8-208ENST00000497892 DUSP6Q16828 381 aa12.22□□□□□ -0.45
ERCC8-208ENST00000497892 ARMCX5Q6P1M9 558 aa12.22□□□□□ -0.45
ERCC8-208ENST00000497892 CRELD2Q6UXH1 353 aaPredicted RBP12.22□□□□□ -0.45
ERCC8-208ENST00000497892 RBM23Q86U06 439 aaKnown RBP12.22□□□□□ -0.45
ERCC8-208ENST00000497892 CD302Q8IX05 232 aa12.22□□□□□ -0.45
ERCC8-208ENST00000497892 EFHBQ8N7U6 833 aa12.22□□□□□ -0.45
ERCC8-208ENST00000497892 ATXN2LQ8WWM7 1075 aaKnown RBP12.22□□□□□ -0.45
ERCC8-208ENST00000497892 AUTS2Q8WXX7 1259 aa12.22□□□□□ -0.45
ERCC8-208ENST00000497892 C18orf25Q96B23 403 aaPredicted RBP12.22□□□□□ -0.45
ERCC8-208ENST00000497892 TIGD1Q96MW7 591 aa12.22□□□□□ -0.45
ERCC8-208ENST00000497892 IPO9Q96P70 1041 aaKnown RBP12.22□□□□□ -0.45
ERCC8-208ENST00000497892 CDCA3Q99618 268 aaPredicted RBP12.22□□□□□ -0.45
ERCC8-208ENST00000497892 TLE6Q9H808 572 aa12.22□□□□□ -0.45
ERCC8-208ENST00000497892 SLC39A2Q9NP94 309 aa12.22□□□□□ -0.45
ERCC8-208ENST00000497892 TUBGCP4Q9UGJ1 667 aa12.22□□□□□ -0.45
ERCC8-208ENST00000497892 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.21□□□□□ -0.45
ERCC8-208ENST00000497892 LACTBL1A8MY62 500 aa12.21□□□□□ -0.45
ERCC8-208ENST00000497892 KIAA0391O15091 583 aaKnown RBP12.21□□□□□ -0.45
ERCC8-208ENST00000497892 LINC01565O15544 149 aa12.21□□□□□ -0.45
ERCC8-208ENST00000497892 TGFB1I1O43294 461 aa12.21□□□□□ -0.45
ERCC8-208ENST00000497892 GADD45BO75293 160 aaPredicted RBP12.21□□□□□ -0.45
ERCC8-208ENST00000497892 TBX10O75333 385 aa12.21□□□□□ -0.45
ERCC8-208ENST00000497892 TADA2AO75478 443 aa12.21□□□□□ -0.45
ERCC8-208ENST00000497892 B3GAT3O94766 335 aa12.21□□□□□ -0.45
ERCC8-208ENST00000497892 RHOBTB3O94955 611 aa12.21□□□□□ -0.45
ERCC8-208ENST00000497892 GLP2RO95838 553 aa12.21□□□□□ -0.45
ERCC8-208ENST00000497892 LDHAP00338 332 aaKnown RBP12.21□□□□□ -0.45
ERCC8-208ENST00000497892 CYP3A5P20815 502 aa12.21□□□□□ -0.45
ERCC8-208ENST00000497892 RPL9P32969 192 aaKnown RBP12.21□□□□□ -0.45
ERCC8-208ENST00000497892 GLUD2P49448 558 aa12.21□□□□□ -0.45
ERCC8-208ENST00000497892 SNRPFP62306 86 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms