RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 MED24O75448 989 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 HARSP12081 509 aaKnown RBP11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 GYS1P13807 737 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 VAV1P15498 845 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 RRM1P23921 792 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 HIBADHP31937 336 aaKnown RBP11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 PSMC2P35998 433 aaKnown RBP11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 ASPHQ12797 758 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 TTBK2Q6IQ55 1244 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 RINLQ6ZS11 566 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 SDCCAG8Q86SQ7 713 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 ART4Q93070 314 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 ACSF2Q96CM8 615 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 PLEKHG4BQ96PX9 1271 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 SPATA16Q9BXB7 569 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 ZWILCHQ9H900 591 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 ANLNQ9NQW6 1124 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 GINM1Q9NU53 330 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 ANKFY1Q9P2R3 1169 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 E7ENQ6 273 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 MYL2P10916 166 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 BCRP11274 1271 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 ABCD1P33897 745 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 UBXN2AP68543 259 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 TRIM28Q13263 835 aaKnown RBP11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 KIF22Q14807 665 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 FASTKD3Q14CZ7 662 aaKnown RBP11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 BBS9Q3SYG4 887 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 CBWD6Q4V339 395 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 CBWD3Q5JTY5 395 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 CBWD5Q5RIA9 395 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 MFSD4BQ5TF39 518 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 SLFN11Q7Z7L1 901 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 ARHGAP18Q8N392 663 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 CCDC110Q8TBZ0 833 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 PIGBQ92521 554 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 NSUN4Q96CB9 384 aaKnown RBP11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 CEP95Q96GE4 821 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 SIKE1Q9BRV8 207 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 PLA2G12BQ9BX93 195 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 TSSK1BQ9BXA7 367 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 TMEM120AQ9BXJ8 343 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 PSTPIP2Q9H939 334 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 ATP8A2Q9NTI2 1148 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 PRKAG3Q9UGI9 489 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 KAT6AQ92794 2004 aa11.25□□□□□ -0.61
TRAPPC12-223ENST00000497597 SPDYE16A6NNV3 312 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC12-223ENST00000497597 DDX39AO00148 427 aaKnown RBP11.24□□□□□ -0.61
TRAPPC12-223ENST00000497597 PDE5AO76074 875 aa11.24□□□□□ -0.61
TRAPPC12-223ENST00000497597 ZWINTO95229 277 aa11.24□□□□□ -0.61
TRAPPC12-223ENST00000497597 TAL1P17542 331 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC12-223ENST00000497597 SKIV2L2P42285 1042 aaKnown RBP11.24□□□□□ -0.61
TRAPPC12-223ENST00000497597 YARSP54577 528 aaKnown RBP11.24□□□□□ -0.61
TRAPPC12-223ENST00000497597 PDIA2Q13087 525 aaKnown RBP11.24□□□□□ -0.61
TRAPPC12-223ENST00000497597 FRMD5Q7Z6J6 570 aa11.24□□□□□ -0.61
TRAPPC12-223ENST00000497597 POU5F2Q8N7G0 328 aa11.24□□□□□ -0.61
TRAPPC12-223ENST00000497597 CFAP57Q96MR6 1250 aa11.24□□□□□ -0.61
TRAPPC12-223ENST00000497597 EBF3Q9H4W6 596 aa11.24□□□□□ -0.61
TRAPPC12-223ENST00000497597 HOMER2Q9NSB8 354 aa11.24□□□□□ -0.61
TRAPPC12-223ENST00000497597 APPL1Q9UKG1 709 aa11.24□□□□□ -0.61
TRAPPC12-223ENST00000497597 DISP2A7MBM2 1401 aa11.24□□□□□ -0.61
TRAPPC12-223ENST00000497597 EDF1O60869 148 aaKnown RBP11.24□□□□□ -0.61
TRAPPC12-223ENST00000497597 ETS1P14921 441 aa11.24□□□□□ -0.61
TRAPPC12-223ENST00000497597 FMO5P49326 533 aa11.24□□□□□ -0.61
TRAPPC12-223ENST00000497597 AP2B1P63010 937 aa11.24□□□□□ -0.61
TRAPPC12-223ENST00000497597 GPS1Q13098 491 aa11.24□□□□□ -0.61
TRAPPC12-223ENST00000497597 TMCO4Q5TGY1 634 aa11.24□□□□□ -0.61
TRAPPC12-223ENST00000497597 PCNX4Q63HM2 1172 aa11.24□□□□□ -0.61
TRAPPC12-223ENST00000497597 MFSD5Q6N075 450 aa11.24□□□□□ -0.61
TRAPPC12-223ENST00000497597 MARK2Q7KZI7 788 aaKnown RBP11.24□□□□□ -0.61
TRAPPC12-223ENST00000497597 SMC1BQ8NDV3 1235 aa11.24□□□□□ -0.61
TRAPPC12-223ENST00000497597 MORC4Q8TE76 937 aa11.24□□□□□ -0.61
TRAPPC12-223ENST00000497597 FAM84AQ96KN4 292 aa11.24□□□□□ -0.61
TRAPPC12-223ENST00000497597 C10orf88Q9H8K7 445 aa11.24□□□□□ -0.61
TRAPPC12-223ENST00000497597 ARHGEF38Q9NXL2 777 aa11.24□□□□□ -0.61
TRAPPC12-223ENST00000497597 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.24□□□□□ -0.61
TRAPPC12-223ENST00000497597 R3HDM2Q9Y2K5 976 aaKnown RBP11.24□□□□□ -0.61
TRAPPC12-223ENST00000497597 DIS3Q9Y2L1 958 aaKnown RBP11.24□□□□□ -0.61
TRAPPC12-223ENST00000497597 ATRNO75882 1429 aa11.24□□□□□ -0.61
TRAPPC12-223ENST00000497597 MYOCOSA0A1B0GUC4 107 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 ATP2A1O14983 1001 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 SGPL1O95470 568 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 OATP04181 439 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 LDHBP07195 334 aaKnown RBP11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 IL2RBP14784 551 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 HSPA1LP34931 641 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 R3HDM1Q15032 1099 aaKnown RBP11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 WDR72Q3MJ13 1102 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 TRIM67Q6ZTA4 783 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 ALYREFQ86V81 257 aaKnown RBP11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 PASD1Q8IV76 773 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 ERMNQ8TAM6 284 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 PTPRN2Q92932 1015 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 OLFM3Q96PB7 478 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 STK33Q9BYT3 514 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 GRIP2Q9C0E4 1043 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 AAASQ9NRG9 546 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 DOLKQ9UPQ8 538 aa11.23□□□□□ -0.61
TRAPPC12-223ENST00000497597 KDM3BQ7LBC6 1761 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms