RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 CCDC194A0A1B0GVG4 234 aa6.05□□□□□ -1.44
VPS36-206ENST00000497149 CAPN14A8MX76 684 aa6.05□□□□□ -1.44
VPS36-206ENST00000497149 KIAA0391O15091 583 aaKnown RBP6.05□□□□□ -1.44
VPS36-206ENST00000497149 HK1P19367 917 aa6.05□□□□□ -1.44
VPS36-206ENST00000497149 ACO1P21399 889 aaKnown RBP6.05□□□□□ -1.44
VPS36-206ENST00000497149 VPS72Q15906 364 aa6.05□□□□□ -1.44
VPS36-206ENST00000497149 KIAA0753Q2KHM9 967 aa6.05□□□□□ -1.44
VPS36-206ENST00000497149 MAEAQ7L5Y9 396 aa6.05□□□□□ -1.44
VPS36-206ENST00000497149 PPP1R3BQ86XI6 285 aa6.05□□□□□ -1.44
VPS36-206ENST00000497149 ZNF808Q8N4W9 903 aaPredicted RBP6.05□□□□□ -1.44
VPS36-206ENST00000497149 MB21D1Q8N884 522 aa6.05□□□□□ -1.44
VPS36-206ENST00000497149 RNF169Q8NCN4 708 aa6.05□□□□□ -1.44
VPS36-206ENST00000497149 NLGN4YQ8NFZ3 816 aaPredicted RBP6.05□□□□□ -1.44
VPS36-206ENST00000497149 ATXN2LQ8WWM7 1075 aaKnown RBP6.05□□□□□ -1.44
VPS36-206ENST00000497149 FAM89AQ96GI7 184 aa6.05□□□□□ -1.44
VPS36-206ENST00000497149 NT5C1BQ96P26 610 aa6.05□□□□□ -1.44
VPS36-206ENST00000497149 BDH2Q9BUT1 245 aa6.05□□□□□ -1.44
VPS36-206ENST00000497149 MRPL46Q9H2W6 279 aaKnown RBP6.05□□□□□ -1.44
VPS36-206ENST00000497149 GSTO2Q9H4Y5 243 aa6.05□□□□□ -1.44
VPS36-206ENST00000497149 CD248Q9HCU0 757 aa6.05□□□□□ -1.44
VPS36-206ENST00000497149 GNL3LQ9NVN8 582 aaKnown RBP6.05□□□□□ -1.44
VPS36-206ENST00000497149 FBXO34Q9NWN3 711 aa6.05□□□□□ -1.44
VPS36-206ENST00000497149 POGKQ9P215 609 aa6.05□□□□□ -1.44
VPS36-206ENST00000497149 PCDHA1Q9Y5I3 950 aa6.05□□□□□ -1.44
VPS36-206ENST00000497149 DRGXA6NNA5 263 aa6.04□□□□□ -1.44
VPS36-206ENST00000497149 PRRG2O14669 202 aa6.04□□□□□ -1.44
VPS36-206ENST00000497149 SLC43A1O75387 559 aa6.04□□□□□ -1.44
VPS36-206ENST00000497149 ALAS1P13196 640 aa6.04□□□□□ -1.44
VPS36-206ENST00000497149 MGAT1P26572 445 aa6.04□□□□□ -1.44
VPS36-206ENST00000497149 SLC6A4P31645 630 aa6.04□□□□□ -1.44
VPS36-206ENST00000497149 RABGGTBP53611 331 aa6.04□□□□□ -1.44
VPS36-206ENST00000497149 FAM193AP78312 1265 aa6.04□□□□□ -1.44
VPS36-206ENST00000497149 CNN3Q15417 329 aaKnown RBP6.04□□□□□ -1.44
VPS36-206ENST00000497149 COBLL1Q53SF7 1204 aa6.04□□□□□ -1.44
VPS36-206ENST00000497149 HS1BP3Q53T59 392 aa6.04□□□□□ -1.44
VPS36-206ENST00000497149 DCAF17Q5H9S7 520 aaPredicted RBP6.04□□□□□ -1.44
VPS36-206ENST00000497149 RNF220Q5VTB9 566 aa6.04□□□□□ -1.44
VPS36-206ENST00000497149 C1QL3Q5VWW1 255 aa6.04□□□□□ -1.44
VPS36-206ENST00000497149 PPP4R4Q6NUP7 873 aa6.04□□□□□ -1.44
VPS36-206ENST00000497149 SWSAP1Q6NVH7 229 aa6.04□□□□□ -1.44
VPS36-206ENST00000497149 DARS2Q6PI48 645 aaKnown RBP6.04□□□□□ -1.44
VPS36-206ENST00000497149 COL23A1Q86Y22 540 aaPredicted RBP6.04□□□□□ -1.44
VPS36-206ENST00000497149 PJA1Q8NG27 643 aa6.04□□□□□ -1.44
VPS36-206ENST00000497149 CXorf38Q8TB03 319 aa6.04□□□□□ -1.44
VPS36-206ENST00000497149 C1orf43Q9BWL3 253 aa6.04□□□□□ -1.44
VPS36-206ENST00000497149 BHMT2Q9H2M3 363 aa6.04□□□□□ -1.44
VPS36-206ENST00000497149 STAP2Q9UGK3 403 aa6.04□□□□□ -1.44
VPS36-206ENST00000497149 JAG2Q9Y219 1238 aa6.04□□□□□ -1.44
VPS36-206ENST00000497149 CFAP69A5D8W1 941 aa6.03□□□□□ -1.44
VPS36-206ENST00000497149 GOLIM4O00461 696 aa6.03□□□□□ -1.44
VPS36-206ENST00000497149 HIBADHP31937 336 aaKnown RBP6.03□□□□□ -1.44
VPS36-206ENST00000497149 PIK3CGP48736 1102 aa6.03□□□□□ -1.44
VPS36-206ENST00000497149 CACNB3P54284 484 aa6.03□□□□□ -1.44
VPS36-206ENST00000497149 PLP2Q04941 152 aa6.03□□□□□ -1.44
VPS36-206ENST00000497149 CCDC93Q567U6 631 aa6.03□□□□□ -1.44
VPS36-206ENST00000497149 KHDC1LQ5JSQ8 128 aa6.03□□□□□ -1.44
VPS36-206ENST00000497149 LCE5AQ5TCM9 118 aa6.03□□□□□ -1.44
VPS36-206ENST00000497149 NAIF1Q69YI7 327 aaPredicted RBP6.03□□□□□ -1.44
VPS36-206ENST00000497149 OR10H5Q8NGA6 315 aa6.03□□□□□ -1.44
VPS36-206ENST00000497149 EDAQ92838 391 aa6.03□□□□□ -1.44
VPS36-206ENST00000497149 TNPO1Q92973 898 aaKnown RBP6.03□□□□□ -1.44
VPS36-206ENST00000497149 LOXL4Q96JB6 756 aa6.03□□□□□ -1.44
VPS36-206ENST00000497149 MNTQ99583 582 aa6.03□□□□□ -1.44
VPS36-206ENST00000497149 PACSIN1Q9BY11 444 aa6.03□□□□□ -1.44
VPS36-206ENST00000497149 ZMAT3Q9HA38 289 aaKnown RBP6.03□□□□□ -1.44
VPS36-206ENST00000497149 ATP6V0A4Q9HBG4 840 aa6.03□□□□□ -1.44
VPS36-206ENST00000497149 SARS2Q9NP81 518 aaKnown RBP6.03□□□□□ -1.44
VPS36-206ENST00000497149 SLC52A1Q9NWF4 448 aa6.03□□□□□ -1.44
VPS36-206ENST00000497149 JKAMPQ9P055 326 aa6.03□□□□□ -1.44
VPS36-206ENST00000497149 PCDHA6Q9UN73 950 aa6.03□□□□□ -1.44
VPS36-206ENST00000497149 PRSS29PA6NIE9 313 aa6.02□□□□□ -1.45
VPS36-206ENST00000497149 APAF1O14727 1248 aa6.02□□□□□ -1.45
VPS36-206ENST00000497149 CYP27B1O15528 508 aa6.02□□□□□ -1.45
VPS36-206ENST00000497149 HAUS5O94927 633 aa6.02□□□□□ -1.45
VPS36-206ENST00000497149 MAP4K4O95819 1239 aaPredicted RBP6.02□□□□□ -1.45
VPS36-206ENST00000497149 AHSGP02765 367 aa6.02□□□□□ -1.45
VPS36-206ENST00000497149 PHKG2P15735 406 aa6.02□□□□□ -1.45
VPS36-206ENST00000497149 SLC6A2P23975 617 aa6.02□□□□□ -1.45
VPS36-206ENST00000497149 CTSWP56202 376 aa6.02□□□□□ -1.45
VPS36-206ENST00000497149 SEMA5AQ13591 1074 aa6.02□□□□□ -1.45
VPS36-206ENST00000497149 SAFBQ15424 915 aaKnown RBP eCLIP6.02□□□□□ -1.45
VPS36-206ENST00000497149 Q6ZRM9 215 aa6.02□□□□□ -1.45
VPS36-206ENST00000497149 HTR3DQ70Z44 454 aa6.02□□□□□ -1.45
VPS36-206ENST00000497149 MED25Q71SY5 747 aa6.02□□□□□ -1.45
VPS36-206ENST00000497149 SYT12Q8IV01 421 aa6.02□□□□□ -1.45
VPS36-206ENST00000497149 BRIX1Q8TDN6 353 aaKnown RBP6.02□□□□□ -1.45
VPS36-206ENST00000497149 GPR87Q9BY21 358 aa6.02□□□□□ -1.45
VPS36-206ENST00000497149 C22orf23Q9BZE7 217 aa6.02□□□□□ -1.45
VPS36-206ENST00000497149 DEF6Q9H4E7 631 aa6.02□□□□□ -1.45
VPS36-206ENST00000497149 BRD9Q9H8M2 597 aa6.02□□□□□ -1.45
VPS36-206ENST00000497149 CPA4Q9UI42 421 aa6.02□□□□□ -1.45
VPS36-206ENST00000497149 ST6GALNAC2Q9UJ37 374 aa6.02□□□□□ -1.45
VPS36-206ENST00000497149 CNOT11Q9UKZ1 510 aaKnown RBP6.02□□□□□ -1.45
VPS36-206ENST00000497149 ZDHHC8Q9ULC8 765 aa6.02□□□□□ -1.45
VPS36-206ENST00000497149 FAM50BQ9Y247 325 aa6.02□□□□□ -1.45
VPS36-206ENST00000497149 XDHP47989 1333 aa6.01□□□□□ -1.45
VPS36-206ENST00000497149 A0A1W2PPL8 197 aa6.01□□□□□ -1.45
VPS36-206ENST00000497149 KLRG2A4D1S0 409 aaPredicted RBP6.01□□□□□ -1.45
VPS36-206ENST00000497149 GOLGA6L6A8MZA4 724 aa6.01□□□□□ -1.45
VPS36-206ENST00000497149 K7ESM1 405 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms