RNA–Protein interactions for RNA: ENST00000497069.2

PMF1-205, Transcript of polyamine modulated factor 1, humanhuman

TSL 3

Gene PMF1, Length 837 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-205ENST00000497069 CLCNKBP51801 687 aa17.13■□□□□ 0.33
PMF1-205ENST00000497069 AP3M2P53677 418 aa17.13■□□□□ 0.33
PMF1-205ENST00000497069 WNT7BP56706 349 aa17.13■□□□□ 0.33
PMF1-205ENST00000497069 SOX4Q06945 474 aaPredicted RBP17.13■□□□□ 0.33
PMF1-205ENST00000497069 BFSP1Q12934 665 aa17.13■□□□□ 0.33
PMF1-205ENST00000497069 ANO6Q4KMQ2 910 aa17.13■□□□□ 0.33
PMF1-205ENST00000497069 DCLRE1AQ6PJP8 1040 aa17.13■□□□□ 0.33
PMF1-205ENST00000497069 C11orf57Q6ZUT1 292 aaPredicted RBP17.13■□□□□ 0.33
PMF1-205ENST00000497069 SPRED2Q7Z698 418 aa17.13■□□□□ 0.33
PMF1-205ENST00000497069 SLC39A11Q8N1S5 342 aa17.13■□□□□ 0.33
PMF1-205ENST00000497069 KLHL23Q8NBE8 558 aa17.13■□□□□ 0.33
PMF1-205ENST00000497069 POP1Q99575 1024 aaKnown RBP17.13■□□□□ 0.33
PMF1-205ENST00000497069 GZF1Q9H116 711 aaPredicted RBP17.13■□□□□ 0.33
PMF1-205ENST00000497069 DPP3Q9NY33 737 aa17.13■□□□□ 0.33
PMF1-205ENST00000497069 ARMCX3Q9UH62 379 aaPredicted RBP17.13■□□□□ 0.33
PMF1-205ENST00000497069 PUF60Q9UHX1 559 aaKnown RBP17.13■□□□□ 0.33
PMF1-205ENST00000497069 GBF1Q92538 1859 aa17.13■□□□□ 0.33
PMF1-205ENST00000497069 RALGAPA2Q2PPJ7 1873 aa17.12■□□□□ 0.33
PMF1-205ENST00000497069 LRRIQ3A6PVS8 624 aaPredicted RBP17.12■□□□□ 0.33
PMF1-205ENST00000497069 C5orf67F2Z3F1 127 aa17.12■□□□□ 0.33
PMF1-205ENST00000497069 STX10O60499 249 aa17.12■□□□□ 0.33
PMF1-205ENST00000497069 B3GAT3O94766 335 aa17.12■□□□□ 0.33
PMF1-205ENST00000497069 LRPAP1P30533 357 aa17.12■□□□□ 0.33
PMF1-205ENST00000497069 GUCY2FP51841 1108 aa17.12■□□□□ 0.33
PMF1-205ENST00000497069 ENPEPQ07075 957 aa17.12■□□□□ 0.33
PMF1-205ENST00000497069 GPM6BQ13491 265 aa17.12■□□□□ 0.33
PMF1-205ENST00000497069 UPP1Q16831 310 aa17.12■□□□□ 0.33
PMF1-205ENST00000497069 TCERG1LQ5VWI1 586 aa17.12■□□□□ 0.33
PMF1-205ENST00000497069 GPR153Q6NV75 609 aa17.12■□□□□ 0.33
PMF1-205ENST00000497069 FRMD5Q7Z6J6 570 aa17.12■□□□□ 0.33
PMF1-205ENST00000497069 CREBRFQ8IUR6 639 aa17.12■□□□□ 0.33
PMF1-205ENST00000497069 FAM114A1Q8IWE2 563 aa17.12■□□□□ 0.33
PMF1-205ENST00000497069 ENOX1Q8TC92 643 aaKnown RBP17.12■□□□□ 0.33
PMF1-205ENST00000497069 RABGGTAQ92696 567 aa17.12■□□□□ 0.33
PMF1-205ENST00000497069 IGSF21Q96ID5 467 aa17.12■□□□□ 0.33
PMF1-205ENST00000497069 PAAF1Q9BRP4 392 aa17.12■□□□□ 0.33
PMF1-205ENST00000497069 MTMR12Q9C0I1 747 aa17.12■□□□□ 0.33
PMF1-205ENST00000497069 MAGEC2Q9UBF1 373 aaPredicted RBP17.12■□□□□ 0.33
PMF1-205ENST00000497069 CACNG4Q9UBN1 327 aa17.12■□□□□ 0.33
PMF1-205ENST00000497069 STK39Q9UEW8 545 aa17.12■□□□□ 0.33
PMF1-205ENST00000497069 ITGA11Q9UKX5 1188 aa17.12■□□□□ 0.33
PMF1-205ENST00000497069 NUB1Q9Y5A7 615 aa17.12■□□□□ 0.33
PMF1-205ENST00000497069 LAMA2P24043 3122 aaKnown RBP17.12■□□□□ 0.33
PMF1-205ENST00000497069 CITO14578 2027 aa17.11■□□□□ 0.33
PMF1-205ENST00000497069 H3BNC9 293 aa17.11■□□□□ 0.33
PMF1-205ENST00000497069 IKBKBO14920 756 aa17.11■□□□□ 0.33
PMF1-205ENST00000497069 PHACTR2O75167 634 aa17.11■□□□□ 0.33
PMF1-205ENST00000497069 KIF4AO95239 1232 aa17.11■□□□□ 0.33
PMF1-205ENST00000497069 ITGB3P05106 788 aa17.11■□□□□ 0.33
PMF1-205ENST00000497069 KRT19P08727 400 aa17.11■□□□□ 0.33
PMF1-205ENST00000497069 PLCB3Q01970 1234 aa17.11■□□□□ 0.33
PMF1-205ENST00000497069 MYL5Q02045 173 aa17.11■□□□□ 0.33
PMF1-205ENST00000497069 BIRC3Q13489 604 aa17.11■□□□□ 0.33
PMF1-205ENST00000497069 DCAF17Q5H9S7 520 aaPredicted RBP17.11■□□□□ 0.33
PMF1-205ENST00000497069 OR5B17Q8NGF7 314 aa17.11■□□□□ 0.33
PMF1-205ENST00000497069 PLEKHO2Q8TD55 490 aa17.11■□□□□ 0.33
PMF1-205ENST00000497069 MED15Q96RN5 788 aa17.11■□□□□ 0.33
PMF1-205ENST00000497069 TTYH1Q9H313 450 aaPredicted RBP17.11■□□□□ 0.33
PMF1-205ENST00000497069 THAP9Q9H5L6 903 aa17.11■□□□□ 0.33
PMF1-205ENST00000497069 ADAM28Q9UKQ2 775 aa17.11■□□□□ 0.33
PMF1-205ENST00000497069 PTPRJQ12913 1337 aa17.11■□□□□ 0.33
PMF1-205ENST00000497069 TDRD15B5MCY1 1934 aaKnown RBP17.1■□□□□ 0.33
PMF1-205ENST00000497069 TMEM189-UBE2V1I3L0A0 370 aa17.1■□□□□ 0.33
PMF1-205ENST00000497069 TRAPPC3O43617 180 aa17.1■□□□□ 0.33
PMF1-205ENST00000497069 TRIM49P0CI25 452 aa17.1■□□□□ 0.33
PMF1-205ENST00000497069 TRIM49CP0CI26 452 aa17.1■□□□□ 0.33
PMF1-205ENST00000497069 DLG4P78352 724 aa17.1■□□□□ 0.33
PMF1-205ENST00000497069 CLDN10P78369 228 aa17.1■□□□□ 0.33
PMF1-205ENST00000497069 UBE3AQ05086 875 aa17.1■□□□□ 0.33
PMF1-205ENST00000497069 C9orf57Q5W0N0 161 aa17.1■□□□□ 0.33
PMF1-205ENST00000497069 TRAPPC11Q7Z392 1133 aa17.1■□□□□ 0.33
PMF1-205ENST00000497069 C1orf127Q8N9H9 656 aa17.1■□□□□ 0.33
PMF1-205ENST00000497069 HASPINQ8TF76 798 aa17.1■□□□□ 0.33
PMF1-205ENST00000497069 BORCS6Q96GS4 357 aa17.1■□□□□ 0.33
PMF1-205ENST00000497069 CNOT6LQ96LI5 555 aaKnown RBP17.1■□□□□ 0.33
PMF1-205ENST00000497069 FAM161BQ96MY7 647 aa17.1■□□□□ 0.33
PMF1-205ENST00000497069 FUCA2Q9BTY2 467 aa17.1■□□□□ 0.33
PMF1-205ENST00000497069 MMRN2Q9H8L6 949 aa17.1■□□□□ 0.33
PMF1-205ENST00000497069 ALG13Q9NP73 1137 aaKnown RBP17.1■□□□□ 0.33
PMF1-205ENST00000497069 MARCH5Q9NX47 278 aa17.1■□□□□ 0.33
PMF1-205ENST00000497069 AGAP1Q9UPQ3 857 aa17.1■□□□□ 0.33
PMF1-205ENST00000497069 LZTS1Q9Y250 596 aa17.1■□□□□ 0.33
PMF1-205ENST00000497069 NFE2L3Q9Y4A8 694 aa17.1■□□□□ 0.33
PMF1-205ENST00000497069 SF3B1O75533 1304 aaKnown RBP eCLIP17.1■□□□□ 0.335e-10■■■■■ 120.6
PMF1-205ENST00000497069 SMTNL1A8MU46 457 aa17.09■□□□□ 0.33
PMF1-205ENST00000497069 CLSTN1O94985 981 aa17.09■□□□□ 0.33
PMF1-205ENST00000497069 ITGB1P05556 798 aa17.09■□□□□ 0.33
PMF1-205ENST00000497069 PAX3P23760 479 aa17.09■□□□□ 0.33
PMF1-205ENST00000497069 POLR2BP30876 1174 aaKnown RBP17.09■□□□□ 0.33
PMF1-205ENST00000497069 GTF2H1P32780 548 aa17.09■□□□□ 0.33
PMF1-205ENST00000497069 PNPLA4P41247 253 aa17.09■□□□□ 0.33
PMF1-205ENST00000497069 ZNF165P49910 485 aa17.09■□□□□ 0.33
PMF1-205ENST00000497069 RBP5P82980 135 aa17.09■□□□□ 0.33
PMF1-205ENST00000497069 ELAVL2Q12926 359 aaKnown RBP17.09■□□□□ 0.33
PMF1-205ENST00000497069 TRPC3Q13507 836 aa17.09■□□□□ 0.33
PMF1-205ENST00000497069 BMS1Q14692 1282 aaKnown RBP17.09■□□□□ 0.33
PMF1-205ENST00000497069 TMEM173Q86WV6 379 aaPredicted RBP17.09■□□□□ 0.33
PMF1-205ENST00000497069 GDPD5Q8WTR4 605 aa17.09■□□□□ 0.33
PMF1-205ENST00000497069 BCL7CQ8WUZ0 217 aaPredicted RBP17.09■□□□□ 0.33
PMF1-205ENST00000497069 ZNF560Q96MR9 790 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms