RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 LARP4BQ92615 738 aaKnown RBP6.35□□□□□ -1.39
SNX13-211ENST00000496855 HSPBAP1Q96EW2 488 aa6.35□□□□□ -1.39
SNX13-211ENST00000496855 GSTO2Q9H4Y5 243 aa6.35□□□□□ -1.39
SNX13-211ENST00000496855 CALCOCO1Q9P1Z2 691 aa6.35□□□□□ -1.39
SNX13-211ENST00000496855 HS3ST4Q9Y661 456 aa6.35□□□□□ -1.39
SNX13-211ENST00000496855 FPGT-TNNI3KV9GXZ4 949 aa6.35□□□□□ -1.39
SNX13-211ENST00000496855 TMEM200CA6NKL6 621 aa6.34□□□□□ -1.39
SNX13-211ENST00000496855 PRSS23O95084 383 aa6.34□□□□□ -1.39
SNX13-211ENST00000496855 NDUFA10O95299 355 aa6.34□□□□□ -1.39
SNX13-211ENST00000496855 IL33O95760 270 aa6.34□□□□□ -1.39
SNX13-211ENST00000496855 SLPIP03973 132 aa6.34□□□□□ -1.39
SNX13-211ENST00000496855 PDCP20941 246 aa6.34□□□□□ -1.39
SNX13-211ENST00000496855 ZNF280AP59817 542 aaPredicted RBP6.34□□□□□ -1.39
SNX13-211ENST00000496855 DSC2Q02487 901 aa6.34□□□□□ -1.39
SNX13-211ENST00000496855 TLE1Q04724 770 aa6.34□□□□□ -1.39
SNX13-211ENST00000496855 GADL1Q6ZQY3 521 aa6.34□□□□□ -1.39
SNX13-211ENST00000496855 AMER2Q8N7J2 671 aa6.34□□□□□ -1.39
SNX13-211ENST00000496855 NLGN4YQ8NFZ3 816 aaPredicted RBP6.34□□□□□ -1.39
SNX13-211ENST00000496855 PROKR1Q8TCW9 393 aa6.34□□□□□ -1.39
SNX13-211ENST00000496855 MLST8Q9BVC4 326 aa6.34□□□□□ -1.39
SNX13-211ENST00000496855 METTL14Q9HCE5 456 aaKnown RBP6.34□□□□□ -1.39
SNX13-211ENST00000496855 IP6K2Q9UHH9 426 aa6.34□□□□□ -1.39
SNX13-211ENST00000496855 ING1Q9UK53 422 aaPredicted RBP6.34□□□□□ -1.39
SNX13-211ENST00000496855 CENPVL1A0A0U1RR11 272 aa6.34□□□□□ -1.4
SNX13-211ENST00000496855 MARCH11A6NNE9 402 aa6.34□□□□□ -1.4
SNX13-211ENST00000496855 GRM6O15303 877 aa6.34□□□□□ -1.4
SNX13-211ENST00000496855 MAP4K4O95819 1239 aaPredicted RBP6.34□□□□□ -1.4
SNX13-211ENST00000496855 ABHD16AO95870 558 aa6.34□□□□□ -1.4
SNX13-211ENST00000496855 MTHFD1P11586 935 aaKnown RBP6.34□□□□□ -1.4
SNX13-211ENST00000496855 BMPR1AP36894 532 aa6.34□□□□□ -1.4
SNX13-211ENST00000496855 MCL1Q07820 350 aa6.34□□□□□ -1.4
SNX13-211ENST00000496855 FHL2Q14192 279 aa6.34□□□□□ -1.4
SNX13-211ENST00000496855 PABPC1LQ4VXU2 614 aaKnown RBP6.34□□□□□ -1.4
SNX13-211ENST00000496855 LY6G5CQ5SRR4 150 aa6.34□□□□□ -1.4
SNX13-211ENST00000496855 KCNV1Q6PIU1 500 aa6.34□□□□□ -1.4
SNX13-211ENST00000496855 FITM2Q8N6M3 262 aa6.34□□□□□ -1.4
SNX13-211ENST00000496855 CPEB3Q8NE35 698 aaKnown RBP6.34□□□□□ -1.4
SNX13-211ENST00000496855 SORCS2Q96PQ0 1159 aa6.34□□□□□ -1.4
SNX13-211ENST00000496855 DKK2Q9UBU2 259 aa6.34□□□□□ -1.4
SNX13-211ENST00000496855 A0A1B0GTW7 788 aa6.33□□□□□ -1.4
SNX13-211ENST00000496855 CDHR4A6H8M9 788 aa6.33□□□□□ -1.4
SNX13-211ENST00000496855 DTNBO60941 627 aa6.33□□□□□ -1.4
SNX13-211ENST00000496855 HAUS5O94927 633 aa6.33□□□□□ -1.4
SNX13-211ENST00000496855 ABLIM3O94929 683 aa6.33□□□□□ -1.4
SNX13-211ENST00000496855 CFIP05156 583 aa6.33□□□□□ -1.4
SNX13-211ENST00000496855 HLA-DOAP06340 250 aa6.33□□□□□ -1.4
SNX13-211ENST00000496855 POU2F2P09086 479 aa6.33□□□□□ -1.4
SNX13-211ENST00000496855 SBK3P0C264 359 aa6.33□□□□□ -1.4
SNX13-211ENST00000496855 CKBP12277 381 aa6.33□□□□□ -1.4
SNX13-211ENST00000496855 VCAM1P19320 739 aa6.33□□□□□ -1.4
SNX13-211ENST00000496855 USP45Q70EL2 814 aa6.33□□□□□ -1.4
SNX13-211ENST00000496855 ZNF627Q7L945 461 aa6.33□□□□□ -1.4
SNX13-211ENST00000496855 MAPKAPK5Q8IW41 473 aa6.33□□□□□ -1.4
SNX13-211ENST00000496855 ULK2Q8IYT8 1036 aa6.33□□□□□ -1.4
SNX13-211ENST00000496855 PRR18Q8N4B5 295 aa6.33□□□□□ -1.4
SNX13-211ENST00000496855 IL17RDQ8NFM7 739 aa6.33□□□□□ -1.4
SNX13-211ENST00000496855 NUP88Q99567 741 aaPredicted RBP6.33□□□□□ -1.4
SNX13-211ENST00000496855 RNPEPQ9H4A4 650 aa6.33□□□□□ -1.4
SNX13-211ENST00000496855 PRDM16Q9HAZ2 1276 aa6.33□□□□□ -1.4
SNX13-211ENST00000496855 ANKRD6Q9Y2G4 727 aa6.33□□□□□ -1.4
SNX13-211ENST00000496855 MAP3K2Q9Y2U5 619 aa6.33□□□□□ -1.4
SNX13-211ENST00000496855 LPXNO60711 386 aa6.32□□□□□ -1.4
SNX13-211ENST00000496855 CD1AP06126 327 aa6.32□□□□□ -1.4
SNX13-211ENST00000496855 ELANEP08246 267 aa6.32□□□□□ -1.4
SNX13-211ENST00000496855 DDX6P26196 483 aaKnown RBP eCLIP6.32□□□□□ -1.4
SNX13-211ENST00000496855 SLC6A4P31645 630 aa6.32□□□□□ -1.4
SNX13-211ENST00000496855 OCA2Q04671 838 aa6.32□□□□□ -1.4
SNX13-211ENST00000496855 PIN1Q13526 163 aaPredicted RBP6.32□□□□□ -1.4
SNX13-211ENST00000496855 PTPAQ15257 358 aa6.32□□□□□ -1.4
SNX13-211ENST00000496855 KHDC1Q4VXA5 237 aaKnown RBP6.32□□□□□ -1.4
SNX13-211ENST00000496855 TBC1D15Q8TC07 691 aa6.32□□□□□ -1.4
SNX13-211ENST00000496855 NUP133Q8WUM0 1156 aa6.32□□□□□ -1.4
SNX13-211ENST00000496855 PSMD1Q99460 953 aa6.32□□□□□ -1.4
SNX13-211ENST00000496855 VRK1Q99986 396 aaPredicted RBP6.32□□□□□ -1.4
SNX13-211ENST00000496855 ZSWIM1Q9BR11 485 aa6.32□□□□□ -1.4
SNX13-211ENST00000496855 MAN1C1Q9NR34 630 aa6.32□□□□□ -1.4
SNX13-211ENST00000496855 E2F8A0AVK6 867 aa6.31□□□□□ -1.4
SNX13-211ENST00000496855 TPD52L2O43399 206 aaKnown RBP6.31□□□□□ -1.4
SNX13-211ENST00000496855 PF4V1P10720 104 aa6.31□□□□□ -1.4
SNX13-211ENST00000496855 MALP21145 153 aa6.31□□□□□ -1.4
SNX13-211ENST00000496855 FGFR4P22455 802 aa6.31□□□□□ -1.4
SNX13-211ENST00000496855 AKAP5P24588 427 aa6.31□□□□□ -1.4
SNX13-211ENST00000496855 NOMO3P69849 1222 aa6.31□□□□□ -1.4
SNX13-211ENST00000496855 MXRA7P84157 204 aa6.31□□□□□ -1.4
SNX13-211ENST00000496855 RESTQ13127 1097 aa6.31□□□□□ -1.4
SNX13-211ENST00000496855 NOMO2Q5JPE7 1267 aa6.31□□□□□ -1.4
SNX13-211ENST00000496855 ARMC6Q6NXE6 501 aa6.31□□□□□ -1.4
SNX13-211ENST00000496855 CATIPQ7Z7H3 387 aa6.31□□□□□ -1.4
SNX13-211ENST00000496855 ARHGEF19Q8IW93 802 aa6.31□□□□□ -1.4
SNX13-211ENST00000496855 TMEM132CQ8N3T6 1108 aa6.31□□□□□ -1.4
SNX13-211ENST00000496855 UBE2Q2Q8WVN8 375 aa6.31□□□□□ -1.4
SNX13-211ENST00000496855 ADAM2Q99965 735 aa6.31□□□□□ -1.4
SNX13-211ENST00000496855 CCDC78A2IDD5 438 aa6.3□□□□□ -1.4
SNX13-211ENST00000496855 AKAP10O43572 662 aa6.3□□□□□ -1.4
SNX13-211ENST00000496855 CT47B1P0C2W7 299 aaPredicted RBP6.3□□□□□ -1.4
SNX13-211ENST00000496855 FXR1P51114 621 aaKnown RBP eCLIP6.3□□□□□ -1.4
SNX13-211ENST00000496855 RAB27AP51159 221 aa6.3□□□□□ -1.4
SNX13-211ENST00000496855 EPHB1P54762 984 aa6.3□□□□□ -1.4
SNX13-211ENST00000496855 SNAPC2Q13487 334 aa6.3□□□□□ -1.4
SNX13-211ENST00000496855 PLEKHG6Q3KR16 790 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms