RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 GNASQ5JWF2 1037 aa22.74■■□□□ 1.23
FGFR1-223ENST00000496296 USP38Q8NB14 1042 aa22.74■■□□□ 1.23
FGFR1-223ENST00000496296 FBXL13Q8NEE6 735 aa22.74■■□□□ 1.23
FGFR1-223ENST00000496296 RFFLQ8WZ73 363 aa22.74■■□□□ 1.23
FGFR1-223ENST00000496296 MS4A14Q96JA4 679 aa22.74■■□□□ 1.23
FGFR1-223ENST00000496296 PPP1R16BQ96T49 567 aa22.74■■□□□ 1.23
FGFR1-223ENST00000496296 SMARCAL1Q9NZC9 954 aa22.74■■□□□ 1.23
FGFR1-223ENST00000496296 SRRDQ9UH36 339 aa22.74■■□□□ 1.23
FGFR1-223ENST00000496296 TNFSF13BQ9Y275 285 aa22.74■■□□□ 1.23
FGFR1-223ENST00000496296 EVPLQ92817 2033 aa22.74■■□□□ 1.23
FGFR1-223ENST00000496296 MBLAC1A4D2B0 266 aaPredicted RBP22.73■■□□□ 1.23
FGFR1-223ENST00000496296 HSPA8P11142 646 aaKnown RBP22.73■■□□□ 1.23
FGFR1-223ENST00000496296 GPC3P51654 580 aa22.73■■□□□ 1.23
FGFR1-223ENST00000496296 HADHBP55084 474 aaKnown RBP22.73■■□□□ 1.23
FGFR1-223ENST00000496296 CLDN10P78369 228 aa22.73■■□□□ 1.23
FGFR1-223ENST00000496296 CACNB2Q08289 660 aaPredicted RBP22.73■■□□□ 1.23
FGFR1-223ENST00000496296 ZNF568Q3ZCX4 644 aa22.73■■□□□ 1.23
FGFR1-223ENST00000496296 C8orf74Q6P047 294 aa22.73■■□□□ 1.23
FGFR1-223ENST00000496296 C7orf31Q8N865 590 aa22.73■■□□□ 1.23
FGFR1-223ENST00000496296 HDAC7Q8WUI4 952 aa22.73■■□□□ 1.23
FGFR1-223ENST00000496296 SELENOOQ9BVL4 669 aa22.73■■□□□ 1.23
FGFR1-223ENST00000496296 MINDY3Q9H8M7 445 aa22.73■■□□□ 1.23
FGFR1-223ENST00000496296 CASP8AP2Q9UKL3 1982 aa22.73■■□□□ 1.23
FGFR1-223ENST00000496296 KAT6AQ92794 2004 aa22.73■■□□□ 1.23
FGFR1-223ENST00000496296 FOXN3O00409 490 aaPredicted RBP22.73■■□□□ 1.23
FGFR1-223ENST00000496296 POLR3GO15318 223 aaPredicted RBP22.73■■□□□ 1.23
FGFR1-223ENST00000496296 GNRH1P01148 92 aa22.73■■□□□ 1.23
FGFR1-223ENST00000496296 CYP2C9P11712 490 aa22.73■■□□□ 1.23
FGFR1-223ENST00000496296 PROZP22891 400 aa22.73■■□□□ 1.23
FGFR1-223ENST00000496296 NOP2P46087 812 aaKnown RBP22.73■■□□□ 1.23
FGFR1-223ENST00000496296 NNTQ13423 1086 aa22.73■■□□□ 1.23
FGFR1-223ENST00000496296 SV2AQ7L0J3 742 aa22.73■■□□□ 1.23
FGFR1-223ENST00000496296 GLYCTKQ8IVS8 523 aa22.73■■□□□ 1.23
FGFR1-223ENST00000496296 UPF3AQ9H1J1 476 aaKnown RBP22.73■■□□□ 1.23
FGFR1-223ENST00000496296 GDF3Q9NR23 364 aa22.73■■□□□ 1.23
FGFR1-223ENST00000496296 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.73■■□□□ 1.23
FGFR1-223ENST00000496296 C17orf102A2RUQ5 167 aa22.72■■□□□ 1.23
FGFR1-223ENST00000496296 B4GALT5O43286 388 aa22.72■■□□□ 1.23
FGFR1-223ENST00000496296 ERLIN2O94905 339 aa22.72■■□□□ 1.23
FGFR1-223ENST00000496296 EPHB4P54760 987 aa22.72■■□□□ 1.23
FGFR1-223ENST00000496296 SURF1Q15526 300 aa22.72■■□□□ 1.23
FGFR1-223ENST00000496296 EMBQ6PCB8 327 aa22.72■■□□□ 1.23
FGFR1-223ENST00000496296 RASGEF1CQ8N431 466 aa22.72■■□□□ 1.23
FGFR1-223ENST00000496296 CD99L2Q8TCZ2 262 aa22.72■■□□□ 1.23
FGFR1-223ENST00000496296 CAVIN3Q969G5 261 aa22.72■■□□□ 1.23
FGFR1-223ENST00000496296 EXOC4Q96A65 974 aa22.72■■□□□ 1.23
FGFR1-223ENST00000496296 AGPAT1Q99943 283 aa22.72■■□□□ 1.23
FGFR1-223ENST00000496296 MTG1Q9BT17 334 aaPredicted RBP22.72■■□□□ 1.23
FGFR1-223ENST00000496296 FAM49AQ9H0Q0 323 aaPredicted RBP22.72■■□□□ 1.23
FGFR1-223ENST00000496296 PTPRHQ9HD43 1115 aa22.72■■□□□ 1.23
FGFR1-223ENST00000496296 TOPORSQ9NS56 1045 aaPredicted RBP22.72■■□□□ 1.23
FGFR1-223ENST00000496296 RAB20Q9NX57 234 aa22.72■■□□□ 1.23
FGFR1-223ENST00000496296 CNTNAP2Q9UHC6 1331 aa22.72■■□□□ 1.23
FGFR1-223ENST00000496296 ZMYND10O75800 440 aa22.71■■□□□ 1.23
FGFR1-223ENST00000496296 TNFAIP3P21580 790 aa22.71■■□□□ 1.23
FGFR1-223ENST00000496296 NT5DC3Q86UY8 548 aa22.71■■□□□ 1.23
FGFR1-223ENST00000496296 ARHGEF19Q8IW93 802 aa22.71■■□□□ 1.23
FGFR1-223ENST00000496296 BRSK2Q8IWQ3 736 aa22.71■■□□□ 1.23
FGFR1-223ENST00000496296 EIF1ADQ8N9N8 165 aaKnown RBP22.71■■□□□ 1.23
FGFR1-223ENST00000496296 HES6Q96HZ4 224 aa22.71■■□□□ 1.23
FGFR1-223ENST00000496296 UBE2TQ9NPD8 197 aaPredicted RBP22.71■■□□□ 1.23
FGFR1-223ENST00000496296 ANKRD62A6NC57 917 aa22.71■■□□□ 1.23
FGFR1-223ENST00000496296 ABLIM1O14639 778 aa22.71■■□□□ 1.23
FGFR1-223ENST00000496296 IQCF3P0C7M6 154 aa22.71■■□□□ 1.23
FGFR1-223ENST00000496296 PRKAR2AP13861 404 aaKnown RBP22.71■■□□□ 1.23
FGFR1-223ENST00000496296 AP3M2P53677 418 aa22.71■■□□□ 1.23
FGFR1-223ENST00000496296 TRIM32Q13049 653 aa22.71■■□□□ 1.23
FGFR1-223ENST00000496296 ARHGEF6Q15052 776 aa22.71■■□□□ 1.23
FGFR1-223ENST00000496296 ZBTB41Q5SVQ8 909 aa22.71■■□□□ 1.23
FGFR1-223ENST00000496296 COL13A1Q5TAT6 717 aaPredicted RBP22.71■■□□□ 1.23
FGFR1-223ENST00000496296 CGRRF1Q99675 332 aa22.71■■□□□ 1.23
FGFR1-223ENST00000496296 GCOM2Q9BZD3 368 aaPredicted RBP22.71■■□□□ 1.23
FGFR1-223ENST00000496296 TTC7AQ9ULT0 858 aaPredicted RBP22.71■■□□□ 1.23
FGFR1-223ENST00000496296 PACSIN2Q9UNF0 486 aaPredicted RBP22.71■■□□□ 1.23
FGFR1-223ENST00000496296 BHMG1C9JSJ3 638 aaPredicted RBP22.7■■□□□ 1.22
FGFR1-223ENST00000496296 GPR25O00155 361 aa22.7■■□□□ 1.22
FGFR1-223ENST00000496296 ELNP15502 786 aa22.7■■□□□ 1.22
FGFR1-223ENST00000496296 TNNC1P63316 161 aa22.7■■□□□ 1.22
FGFR1-223ENST00000496296 SEZ6Q53EL9 994 aa22.7■■□□□ 1.22
FGFR1-223ENST00000496296 IFT20Q8IY31 132 aa22.7■■□□□ 1.22
FGFR1-223ENST00000496296 RAET1EQ8TD07 263 aa22.7■■□□□ 1.22
FGFR1-223ENST00000496296 NT5C1BQ96P26 610 aa22.7■■□□□ 1.22
FGFR1-223ENST00000496296 ISCUQ9H1K1 167 aa22.7■■□□□ 1.22
FGFR1-223ENST00000496296 CPSF3Q9UKF6 684 aaKnown RBP22.7■■□□□ 1.22
FGFR1-223ENST00000496296 MYADML2A6NDP7 307 aa22.69■■□□□ 1.22
FGFR1-223ENST00000496296 KCNK3O14649 394 aa22.69■■□□□ 1.22
FGFR1-223ENST00000496296 FAM189A1O60320 539 aa22.69■■□□□ 1.22
FGFR1-223ENST00000496296 ZC3H11AO75152 810 aaKnown RBP eCLIP22.69■■□□□ 1.22
FGFR1-223ENST00000496296 PGK1P00558 417 aa22.69■■□□□ 1.22
FGFR1-223ENST00000496296 HMGCRP04035 888 aa22.69■■□□□ 1.22
FGFR1-223ENST00000496296 TNNT3P45378 269 aaPredicted RBP22.69■■□□□ 1.22
FGFR1-223ENST00000496296 MFAP3P55082 362 aa22.69■■□□□ 1.22
FGFR1-223ENST00000496296 NKX3-2P78367 333 aa22.69■■□□□ 1.22
FGFR1-223ENST00000496296 ADAM17P78536 824 aa22.69■■□□□ 1.22
FGFR1-223ENST00000496296 CAP1Q01518 475 aa22.69■■□□□ 1.22
FGFR1-223ENST00000496296 ARHGAP44Q17R89 818 aa22.69■■□□□ 1.22
FGFR1-223ENST00000496296 HSP90B2PQ58FF3 399 aa22.69■■□□□ 1.22
FGFR1-223ENST00000496296 C15orf39Q6ZRI6 1047 aa22.69■■□□□ 1.22
FGFR1-223ENST00000496296 PEX26Q7Z412 305 aa22.69■■□□□ 1.22
FGFR1-223ENST00000496296 FAM71AQ8IYT1 594 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms