RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 SMTNL1A8MU46 457 aa14.6□□□□□ -0.07
PTPN7-218ENST00000496197 VNN1O95497 513 aa14.6□□□□□ -0.07
PTPN7-218ENST00000496197 FGFR1OPO95684 399 aaKnown RBP14.6□□□□□ -0.07
PTPN7-218ENST00000496197 C4BPAP04003 597 aaKnown RBP14.6□□□□□ -0.07
PTPN7-218ENST00000496197 KRT13P13646 458 aa14.6□□□□□ -0.07
PTPN7-218ENST00000496197 GCLMP48507 274 aa14.6□□□□□ -0.07
PTPN7-218ENST00000496197 CLCNKBP51801 687 aa14.6□□□□□ -0.07
PTPN7-218ENST00000496197 KRT31Q15323 416 aa14.6□□□□□ -0.07
PTPN7-218ENST00000496197 TCERG1LQ5VWI1 586 aa14.6□□□□□ -0.07
PTPN7-218ENST00000496197 C15orf39Q6ZRI6 1047 aa14.6□□□□□ -0.07
PTPN7-218ENST00000496197 TMEM173Q86WV6 379 aaPredicted RBP14.6□□□□□ -0.07
PTPN7-218ENST00000496197 BCL7CQ8WUZ0 217 aaPredicted RBP14.6□□□□□ -0.07
PTPN7-218ENST00000496197 FNBP1Q96RU3 617 aa14.6□□□□□ -0.07
PTPN7-218ENST00000496197 RNF216Q9NWF9 866 aaPredicted RBP14.6□□□□□ -0.07
PTPN7-218ENST00000496197 TAB2Q9NYJ8 693 aa14.6□□□□□ -0.07
PTPN7-218ENST00000496197 DERAQ9Y315 318 aa14.6□□□□□ -0.07
PTPN7-218ENST00000496197 LINC01553A4QN01 128 aa14.59□□□□□ -0.07
PTPN7-218ENST00000496197 BECN2A8MW95 431 aa14.59□□□□□ -0.07
PTPN7-218ENST00000496197 NT5C1B-RDH14C9J2C7 533 aa14.59□□□□□ -0.07
PTPN7-218ENST00000496197 ZC3H11AO75152 810 aaKnown RBP eCLIP14.59□□□□□ -0.07
PTPN7-218ENST00000496197 CAVIN2O95810 425 aa14.59□□□□□ -0.07
PTPN7-218ENST00000496197 GNA14O95837 355 aa14.59□□□□□ -0.07
PTPN7-218ENST00000496197 CST3P01034 146 aaPredicted RBP14.59□□□□□ -0.07
PTPN7-218ENST00000496197 ITGB1P05556 798 aa14.59□□□□□ -0.07
PTPN7-218ENST00000496197 CA3P07451 260 aa14.59□□□□□ -0.07
PTPN7-218ENST00000496197 SLC11A1P49279 550 aa14.59□□□□□ -0.07
PTPN7-218ENST00000496197 RNASELQ05823 741 aaKnown RBP14.59□□□□□ -0.07
PTPN7-218ENST00000496197 TUSC3Q13454 348 aa14.59□□□□□ -0.07
PTPN7-218ENST00000496197 CD300LGQ6UXG3 332 aa14.59□□□□□ -0.07
PTPN7-218ENST00000496197 SV2AQ7L0J3 742 aa14.59□□□□□ -0.07
PTPN7-218ENST00000496197 TUBGCP2Q9BSJ2 902 aa14.59□□□□□ -0.07
PTPN7-218ENST00000496197 MRPL9Q9BYD2 267 aaKnown RBP14.59□□□□□ -0.07
PTPN7-218ENST00000496197 METTL14Q9HCE5 456 aaKnown RBP14.59□□□□□ -0.07
PTPN7-218ENST00000496197 DPP3Q9NY33 737 aa14.59□□□□□ -0.07
PTPN7-218ENST00000496197 UBQLN1Q9UMX0 589 aaKnown RBP14.59□□□□□ -0.07
PTPN7-218ENST00000496197 CHD9Q3L8U1 2897 aa14.59□□□□□ -0.07
PTPN7-218ENST00000496197 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.58□□□□□ -0.08
PTPN7-218ENST00000496197 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.58□□□□□ -0.08
PTPN7-218ENST00000496197 ITGB3P05106 788 aa14.58□□□□□ -0.08
PTPN7-218ENST00000496197 TMEM191BP0C7N4 346 aa14.58□□□□□ -0.08
PTPN7-218ENST00000496197 EEF1GP26641 437 aaKnown RBP14.58□□□□□ -0.08
PTPN7-218ENST00000496197 LRPAP1P30533 357 aa14.58□□□□□ -0.08
PTPN7-218ENST00000496197 MTIF2P46199 727 aaKnown RBP14.58□□□□□ -0.08
PTPN7-218ENST00000496197 ENPEPQ07075 957 aa14.58□□□□□ -0.08
PTPN7-218ENST00000496197 KCNH2Q12809 1159 aa14.58□□□□□ -0.08
PTPN7-218ENST00000496197 SURF1Q15526 300 aa14.58□□□□□ -0.08
PTPN7-218ENST00000496197 UPP1Q16831 310 aa14.58□□□□□ -0.08
PTPN7-218ENST00000496197 ZACNQ401N2 412 aa14.58□□□□□ -0.08
PTPN7-218ENST00000496197 TRAPPC11Q7Z392 1133 aa14.58□□□□□ -0.08
PTPN7-218ENST00000496197 FAM114A1Q8IWE2 563 aa14.58□□□□□ -0.08
PTPN7-218ENST00000496197 HASPINQ8TF76 798 aa14.58□□□□□ -0.08
PTPN7-218ENST00000496197 MARCH5Q9NX47 278 aa14.58□□□□□ -0.08
PTPN7-218ENST00000496197 KANSL3Q9P2N6 904 aa14.58□□□□□ -0.08
PTPN7-218ENST00000496197 LIMA1Q9UHB6 759 aaKnown RBP14.58□□□□□ -0.08
PTPN7-218ENST00000496197 CDH23Q9H251 3354 aa14.57□□□□□ -0.08
PTPN7-218ENST00000496197 ANO9A1A5B4 782 aa14.57□□□□□ -0.08
PTPN7-218ENST00000496197 NRP1O14786 923 aa14.57□□□□□ -0.08
PTPN7-218ENST00000496197 AP5Z1O43299 807 aa14.57□□□□□ -0.08
PTPN7-218ENST00000496197 KIF4AO95239 1232 aa14.57□□□□□ -0.08
PTPN7-218ENST00000496197 GALTP07902 379 aa14.57□□□□□ -0.08
PTPN7-218ENST00000496197 CYP3A5P20815 502 aa14.57□□□□□ -0.08
PTPN7-218ENST00000496197 POLR2BP30876 1174 aaKnown RBP14.57□□□□□ -0.08
PTPN7-218ENST00000496197 OR1G1P47890 313 aa14.57□□□□□ -0.08
PTPN7-218ENST00000496197 FMO5P49326 533 aa14.57□□□□□ -0.08
PTPN7-218ENST00000496197 BCAR1P56945 870 aa14.57□□□□□ -0.08
PTPN7-218ENST00000496197 MAN2A1Q16706 1144 aa14.57□□□□□ -0.08
PTPN7-218ENST00000496197 DUOXA2Q1HG44 320 aa14.57□□□□□ -0.08
PTPN7-218ENST00000496197 PRPF38BQ5VTL8 546 aaKnown RBP14.57□□□□□ -0.08
PTPN7-218ENST00000496197 C9orf57Q5W0N0 161 aa14.57□□□□□ -0.08
PTPN7-218ENST00000496197 NT5DC4Q86YG4 428 aa14.57□□□□□ -0.08
PTPN7-218ENST00000496197 FIBCD1Q8N539 461 aa14.57□□□□□ -0.08
PTPN7-218ENST00000496197 BEST2Q8NFU1 509 aa14.57□□□□□ -0.08
PTPN7-218ENST00000496197 TAS1R2Q8TE23 839 aa14.57□□□□□ -0.08
PTPN7-218ENST00000496197 SEMA4DQ92854 862 aa14.57□□□□□ -0.08
PTPN7-218ENST00000496197 CLP1Q92989 425 aaKnown RBP14.57□□□□□ -0.08
PTPN7-218ENST00000496197 ANKRD36BP1Q96IX9 119 aa14.57□□□□□ -0.08
PTPN7-218ENST00000496197 C17orf80Q9BSJ5 609 aa14.57□□□□□ -0.08
PTPN7-218ENST00000496197 VPS16Q9H269 839 aa14.57□□□□□ -0.08
PTPN7-218ENST00000496197 NKX2-4Q9H2Z4 354 aa14.57□□□□□ -0.08
PTPN7-218ENST00000496197 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.57□□□□□ -0.08
PTPN7-218ENST00000496197 SLC38A7Q9NVC3 462 aa14.57□□□□□ -0.08
PTPN7-218ENST00000496197 CHD7Q9P2D1 2997 aa14.57□□□□□ -0.08
PTPN7-218ENST00000496197 MAGEC2Q9UBF1 373 aaPredicted RBP14.57□□□□□ -0.08
PTPN7-218ENST00000496197 PRG3Q9Y2Y8 225 aaPredicted RBP14.57□□□□□ -0.08
PTPN7-218ENST00000496197 PCDHA11Q9Y5I1 949 aa14.57□□□□□ -0.08
PTPN7-218ENST00000496197 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.57□□□□□ -0.08
PTPN7-218ENST00000496197 PODXLO00592 558 aa14.57□□□□□ -0.08
PTPN7-218ENST00000496197 PIRO00625 290 aa14.57□□□□□ -0.08
PTPN7-218ENST00000496197 SPTLC1O15269 473 aa14.57□□□□□ -0.08
PTPN7-218ENST00000496197 PRKCSHP14314 528 aaPredicted RBP14.57□□□□□ -0.08
PTPN7-218ENST00000496197 COPB1P53618 953 aaKnown RBP14.57□□□□□ -0.08
PTPN7-218ENST00000496197 HSP90AA2PQ14568 343 aaPredicted RBP14.57□□□□□ -0.08
PTPN7-218ENST00000496197 PTPN21Q16825 1174 aa14.57□□□□□ -0.08
PTPN7-218ENST00000496197 COLGALT1Q8NBJ5 622 aa14.57□□□□□ -0.08
PTPN7-218ENST00000496197 FAM193BQ96PV7 902 aaPredicted RBP14.57□□□□□ -0.08
PTPN7-218ENST00000496197 TSPAN18Q96SJ8 248 aa14.57□□□□□ -0.08
PTPN7-218ENST00000496197 TMEM8AQ9HCN3 771 aa14.57□□□□□ -0.08
PTPN7-218ENST00000496197 AGAP1Q9UPQ3 857 aa14.57□□□□□ -0.08
PTPN7-218ENST00000496197 GOLGA6L19H0YKK7 550 aa14.56□□□□□ -0.08
PTPN7-218ENST00000496197 TNNC2P02585 160 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms