RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 IDEP14735 1019 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 GRIK3Q13003 919 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 NR1H3Q13133 447 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 E2F5Q15329 346 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 CATSPER3Q86XQ3 398 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 FLCNQ8NFG4 579 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 RIN2Q8WYP3 895 aaPredicted RBP9.2□□□□□ -0.94
VPS13B-206ENST00000496144 ZNF512Q96ME7 567 aaPredicted RBP9.2□□□□□ -0.94
VPS13B-206ENST00000496144 K7ENM7 598 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 RDXP35241 583 aaKnown RBP9.2□□□□□ -0.94
VPS13B-206ENST00000496144 MARSP56192 900 aaKnown RBP9.2□□□□□ -0.94
VPS13B-206ENST00000496144 LAMTOR4Q0VGL1 99 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 TRPC3Q13507 836 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 SLC27A1Q6PCB7 646 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 GLIS3Q8NEA6 775 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 MNS1Q8NEH6 495 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 PRPF31Q8WWY3 499 aaKnown RBP9.2□□□□□ -0.94
VPS13B-206ENST00000496144 FGD4Q96M96 766 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 CHP1Q99653 195 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 CARD6Q9BX69 1037 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 OXCT2Q9BYC2 517 aaPredicted RBP9.2□□□□□ -0.94
VPS13B-206ENST00000496144 TTYH1Q9H313 450 aaPredicted RBP9.2□□□□□ -0.94
VPS13B-206ENST00000496144 MAFO75444 373 aaPredicted RBP9.19□□□□□ -0.94
VPS13B-206ENST00000496144 SPATA31C1P0DKV0 1188 aa9.19□□□□□ -0.94
VPS13B-206ENST00000496144 ZBED6P86452 979 aa9.19□□□□□ -0.94
VPS13B-206ENST00000496144 ERCC6LQ2NKX8 1250 aa9.19□□□□□ -0.94
VPS13B-206ENST00000496144 HS2ST1Q7LGA3 356 aa9.19□□□□□ -0.94
VPS13B-206ENST00000496144 ADHFE1Q8IWW8 467 aa9.19□□□□□ -0.94
VPS13B-206ENST00000496144 EFHBQ8N7U6 833 aa9.19□□□□□ -0.94
VPS13B-206ENST00000496144 OGFRQ9NZT2 677 aa9.19□□□□□ -0.94
VPS13B-206ENST00000496144 PES1O00541 588 aaKnown RBP9.19□□□□□ -0.94
VPS13B-206ENST00000496144 CYP11B2P19099 503 aa9.19□□□□□ -0.94
VPS13B-206ENST00000496144 PDE6CP51160 858 aa9.19□□□□□ -0.94
VPS13B-206ENST00000496144 EPHB3P54753 998 aa9.19□□□□□ -0.94
VPS13B-206ENST00000496144 ARSHQ5FYA8 562 aa9.19□□□□□ -0.94
VPS13B-206ENST00000496144 ZNF569Q5MCW4 686 aa9.19□□□□□ -0.94
VPS13B-206ENST00000496144 POLR3CQ9BUI4 534 aaPredicted RBP9.19□□□□□ -0.94
VPS13B-206ENST00000496144 KCTD10Q9H3F6 313 aa9.19□□□□□ -0.94
VPS13B-206ENST00000496144 NHEJ1Q9H9Q4 299 aaPredicted RBP9.19□□□□□ -0.94
VPS13B-206ENST00000496144 AGPAT5Q9NUQ2 364 aa9.19□□□□□ -0.94
VPS13B-206ENST00000496144 FAM105AQ9NUU6 356 aa9.19□□□□□ -0.94
VPS13B-206ENST00000496144 PCDHB13Q9Y5F0 798 aa9.19□□□□□ -0.94
VPS13B-206ENST00000496144 IGLV3-22A0A075B6J6 115 aa9.19□□□□□ -0.94
VPS13B-206ENST00000496144 SLC8A3P57103 927 aa9.19□□□□□ -0.94
VPS13B-206ENST00000496144 ALCAMQ13740 583 aa9.19□□□□□ -0.94
VPS13B-206ENST00000496144 RTP3Q9BQQ7 232 aa9.19□□□□□ -0.94
VPS13B-206ENST00000496144 PHF7Q9BWX1 381 aaPredicted RBP9.19□□□□□ -0.94
VPS13B-206ENST00000496144 FGFBP2Q9BYJ0 223 aa9.19□□□□□ -0.94
VPS13B-206ENST00000496144 NDST4Q9H3R1 872 aa9.19□□□□□ -0.94
VPS13B-206ENST00000496144 GMEB2Q9UKD1 530 aa9.19□□□□□ -0.94
VPS13B-206ENST00000496144 EPN1Q9Y6I3 576 aaPredicted RBP9.19□□□□□ -0.94
VPS13B-206ENST00000496144 GNA14O95837 355 aa9.19□□□□□ -0.94
VPS13B-206ENST00000496144 KPNA1P52294 538 aaPredicted RBP9.19□□□□□ -0.94
VPS13B-206ENST00000496144 ZNF280DQ6N043 979 aa9.19□□□□□ -0.94
VPS13B-206ENST00000496144 CCDC170Q8IYT3 715 aa9.19□□□□□ -0.94
VPS13B-206ENST00000496144 CEP63Q96MT8 703 aa9.19□□□□□ -0.94
VPS13B-206ENST00000496144 MAFBQ9Y5Q3 323 aaPredicted RBP9.19□□□□□ -0.94
VPS13B-206ENST00000496144 CTAGE9A4FU28 777 aa9.18□□□□□ -0.94
VPS13B-206ENST00000496144 ITGB5P18084 799 aa9.18□□□□□ -0.94
VPS13B-206ENST00000496144 POTEGQ6S5H5 508 aa9.18□□□□□ -0.94
VPS13B-206ENST00000496144 SYT2Q8N9I0 419 aaPredicted RBP9.18□□□□□ -0.94
VPS13B-206ENST00000496144 KCNH6Q9H252 994 aa9.18□□□□□ -0.94
VPS13B-206ENST00000496144 MRPL42Q9Y6G3 142 aaKnown RBP9.18□□□□□ -0.94
VPS13B-206ENST00000496144 RPA1P27694 616 aa9.18□□□□□ -0.94
VPS13B-206ENST00000496144 GPC3P51654 580 aa9.18□□□□□ -0.94
VPS13B-206ENST00000496144 BCAR1P56945 870 aa9.18□□□□□ -0.94
VPS13B-206ENST00000496144 DCP1BQ8IZD4 617 aaKnown RBP9.18□□□□□ -0.94
VPS13B-206ENST00000496144 ANKRD36BP1Q96IX9 119 aa9.18□□□□□ -0.94
VPS13B-206ENST00000496144 ZNF560Q96MR9 790 aa9.18□□□□□ -0.94
VPS13B-206ENST00000496144 NAPGQ99747 312 aaPredicted RBP9.18□□□□□ -0.94
VPS13B-206ENST00000496144 COL25A1Q9BXS0 654 aaPredicted RBP9.18□□□□□ -0.94
VPS13B-206ENST00000496144 IRX2Q9BZI1 471 aaPredicted RBP9.18□□□□□ -0.94
VPS13B-206ENST00000496144 ATP9AO75110 1047 aa9.18□□□□□ -0.94
VPS13B-206ENST00000496144 ABL1P00519 1130 aa9.18□□□□□ -0.94
VPS13B-206ENST00000496144 POMCP01189 267 aa9.18□□□□□ -0.94
VPS13B-206ENST00000496144 GAP43P17677 238 aa9.18□□□□□ -0.94
VPS13B-206ENST00000496144 PPP2R5CQ13362 524 aa9.18□□□□□ -0.94
VPS13B-206ENST00000496144 TSR1Q2NL82 804 aaKnown RBP9.18□□□□□ -0.94
VPS13B-206ENST00000496144 FAM26FQ5R3K3 315 aa9.18□□□□□ -0.94
VPS13B-206ENST00000496144 EPM2AIP1Q7L775 607 aaPredicted RBP9.18□□□□□ -0.94
VPS13B-206ENST00000496144 SLC35F6Q8N357 371 aa9.18□□□□□ -0.94
VPS13B-206ENST00000496144 EIF3CLB5ME19 914 aaKnown RBP9.18□□□□□ -0.94
VPS13B-206ENST00000496144 LCA5LO95447 670 aa9.18□□□□□ -0.94
VPS13B-206ENST00000496144 HNRNPH3P31942 346 aaKnown RBP9.18□□□□□ -0.94
VPS13B-206ENST00000496144 KRT83P78385 493 aa9.18□□□□□ -0.94
VPS13B-206ENST00000496144 MYO1EQ12965 1108 aa9.18□□□□□ -0.94
VPS13B-206ENST00000496144 ARHGAP29Q52LW3 1261 aa9.18□□□□□ -0.94
VPS13B-206ENST00000496144 PLA2G4FQ68DD2 849 aa9.18□□□□□ -0.94
VPS13B-206ENST00000496144 PPP4R3CPQ6ZMV5 832 aa9.18□□□□□ -0.94
VPS13B-206ENST00000496144 EIF3CQ99613 913 aaKnown RBP9.18□□□□□ -0.94
VPS13B-206ENST00000496144 ZNF446Q9NWS9 450 aa9.18□□□□□ -0.94
VPS13B-206ENST00000496144 NCDNQ9UBB6 729 aa9.18□□□□□ -0.94
VPS13B-206ENST00000496144 FRMPD4Q14CM0 1322 aa9.18□□□□□ -0.94
VPS13B-206ENST00000496144 SDHBP21912 280 aa9.18□□□□□ -0.94
VPS13B-206ENST00000496144 SP100P23497 879 aaPredicted RBP9.18□□□□□ -0.94
VPS13B-206ENST00000496144 ATF7IP2Q5U623 682 aa9.18□□□□□ -0.94
VPS13B-206ENST00000496144 ANKS3Q6ZW76 656 aa9.18□□□□□ -0.94
VPS13B-206ENST00000496144 CEP112Q8N8E3 955 aa9.18□□□□□ -0.94
VPS13B-206ENST00000496144 GOLGA1Q92805 767 aa9.18□□□□□ -0.94
VPS13B-206ENST00000496144 PCMTD1Q96MG8 357 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms