RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 WDR78Q5VTH9 848 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 ZKSCAN2Q63HK3 967 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 OLFML2BQ68BL8 750 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 CATSPERGQ6ZRH7 1159 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 FOXP4Q8IVH2 680 aaPredicted RBP5.03□□□□□ -1.6
VPS52-222ENST00000495981 CMIPQ8IY22 773 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 LCORLQ8N3X6 602 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 TOP6BLQ8N6T0 577 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 RCBTB1Q8NDN9 531 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 FBLIM1Q8WUP2 373 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 FRAT1Q92837 279 aaPredicted RBP5.03□□□□□ -1.6
VPS52-222ENST00000495981 RMDN1Q96DB5 314 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 FAM46AQ96IP4 442 aaKnown RBP5.03□□□□□ -1.6
VPS52-222ENST00000495981 TOX2Q96NM4 488 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 NOL10Q9BSC4 688 aaKnown RBP5.03□□□□□ -1.6
VPS52-222ENST00000495981 SLC12A9Q9BXP2 914 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 MOV10L1Q9BXT6 1211 aaKnown RBP5.03□□□□□ -1.6
VPS52-222ENST00000495981 WNT8AQ9H1J5 351 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 C14orf119Q9NWQ9 140 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 GOLGA6AQ9NYA3 693 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 CLEC1BQ9P126 229 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 PPARGC1AQ9UBK2 798 aaKnown RBP5.03□□□□□ -1.6
VPS52-222ENST00000495981 FBXL7Q9UJT9 491 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 RNF112Q9ULX5 631 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 PCDHA11Q9Y5I1 949 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 PLIN4Q96Q06 1357 aa5.03□□□□□ -1.6
VPS52-222ENST00000495981 MAST4O15021 2626 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 ZNFX1Q9P2E3 1918 aaKnown RBP5.02□□□□□ -1.61
VPS52-222ENST00000495981 PTPDC1A2A3K4 754 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 PRR23AA6NEV1 266 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 H0Y858 1186 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 IFRD1O00458 451 aaPredicted RBP5.02□□□□□ -1.61
VPS52-222ENST00000495981 IPO8O15397 1037 aaKnown RBP5.02□□□□□ -1.61
VPS52-222ENST00000495981 ADCY6O43306 1168 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 PPFIA4O75335 1185 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 SURF6O75683 361 aaKnown RBP5.02□□□□□ -1.61
VPS52-222ENST00000495981 ZRANB2O95218 330 aaKnown RBP eCLIP5.02□□□□□ -1.61
VPS52-222ENST00000495981 CHGBP05060 677 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 NAT1P18440 290 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 LORP23490 312 aaPredicted RBP5.02□□□□□ -1.61
VPS52-222ENST00000495981 ACLYP53396 1101 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 USP14P54578 494 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 SNRPNP63162 240 aaKnown RBP5.02□□□□□ -1.61
VPS52-222ENST00000495981 KRT85P78386 507 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 ATP8B2P98198 1209 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 PURAQ00577 322 aaKnown RBP5.02□□□□□ -1.61
VPS52-222ENST00000495981 PAK1Q13153 545 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 G3BP1Q13283 466 aaKnown RBP eCLIP5.02□□□□□ -1.61
VPS52-222ENST00000495981 GBX1Q14549 363 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 GRM3Q14832 879 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 RAB3GAP1Q15042 981 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 INF2Q27J81 1249 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 CCDC158Q5M9N0 1113 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 RTP2Q5QGT7 225 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 E4F1Q66K89 784 aaPredicted RBP5.02□□□□□ -1.61
VPS52-222ENST00000495981 RCSD1Q6JBY9 416 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 FSTL4Q6MZW2 842 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 PPP4R4Q6NUP7 873 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 PSRC1Q6PGN9 363 aaPredicted RBP5.02□□□□□ -1.61
VPS52-222ENST00000495981 TMCO2Q7Z6W1 182 aaPredicted RBP5.02□□□□□ -1.61
VPS52-222ENST00000495981 SIAH1Q8IUQ4 282 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 ITPRIPQ8IWB1 547 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 CMTR2Q8IYT2 770 aaKnown RBP5.02□□□□□ -1.61
VPS52-222ENST00000495981 SHCBP1Q8NEM2 672 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 KLHDC9Q8NEP7 349 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 REPS2Q8NFH8 660 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 GDPD5Q8WTR4 605 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 SDR42E1Q8WUS8 393 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 SLC5A5Q92911 643 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 AHCYL2Q96HN2 611 aaKnown RBP5.02□□□□□ -1.61
VPS52-222ENST00000495981 FAXDC2Q96IV6 333 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 MFSD14AQ96MC6 490 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 UBL7Q96S82 380 aaPredicted RBP5.02□□□□□ -1.61
VPS52-222ENST00000495981 DUSP23Q9BVJ7 150 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 SARGQ9BW04 601 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 PLVAPQ9BX97 442 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 SPATC1LQ9H0A9 340 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 MS4A5Q9H3V2 200 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 IPPKQ9H8X2 491 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 XPNPEP3Q9NQH7 507 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 TLR9Q9NR96 1032 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 OXSMQ9NWU1 459 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 STK17AQ9UEE5 414 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 PNMA8BQ9ULN7 279 aaPredicted RBP5.02□□□□□ -1.61
VPS52-222ENST00000495981 CBLCQ9ULV8 474 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 EXOC6BQ9Y2D4 811 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 ZZEF1O43149 2961 aa5.02□□□□□ -1.61
VPS52-222ENST00000495981 SPEGQ15772 3267 aa5.01□□□□□ -1.61
VPS52-222ENST00000495981 PTPRSQ13332 1948 aa5.01□□□□□ -1.61
VPS52-222ENST00000495981 GRIN2DO15399 1336 aa5.01□□□□□ -1.61
VPS52-222ENST00000495981 ZNF532Q9HCE3 1301 aa5.01□□□□□ -1.61
VPS52-222ENST00000495981 SYNRGQ9UMZ2 1314 aa5.01□□□□□ -1.61
VPS52-222ENST00000495981 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.01□□□□□ -1.61
VPS52-222ENST00000495981 CCDC66A2RUB6 948 aa5.01□□□□□ -1.61
VPS52-222ENST00000495981 FAM181BA6NEQ2 426 aa5.01□□□□□ -1.61
VPS52-222ENST00000495981 PROB1E7EW31 1015 aa5.01□□□□□ -1.61
VPS52-222ENST00000495981 DVL2O14641 736 aa5.01□□□□□ -1.61
VPS52-222ENST00000495981 CTAGE5O15320 804 aa5.01□□□□□ -1.61
VPS52-222ENST00000495981 ULK1O75385 1050 aa5.01□□□□□ -1.61
VPS52-222ENST00000495981 CD4P01730 458 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms