RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 C2CD2LO14523 706 aa18.6■□□□□ 0.57
SNX17-209ENST00000494893 PPEF2O14830 753 aa18.6■□□□□ 0.57
SNX17-209ENST00000494893 NCK2O43639 380 aa18.6■□□□□ 0.57
SNX17-209ENST00000494893 EXTL3O43909 919 aa18.6■□□□□ 0.57
SNX17-209ENST00000494893 B3GAT3O94766 335 aa18.6■□□□□ 0.57
SNX17-209ENST00000494893 CNPP09543 421 aaKnown RBP18.6■□□□□ 0.57
SNX17-209ENST00000494893 LRPAP1P30533 357 aa18.6■□□□□ 0.57
SNX17-209ENST00000494893 GLUD2P49448 558 aa18.6■□□□□ 0.57
SNX17-209ENST00000494893 MRPS5P82675 430 aaKnown RBP18.6■□□□□ 0.57
SNX17-209ENST00000494893 POU5F1Q01860 360 aaKnown RBP18.6■□□□□ 0.57
SNX17-209ENST00000494893 PSMD2Q13200 908 aa18.6■□□□□ 0.57
SNX17-209ENST00000494893 SPATA1Q5VX52 437 aa18.6■□□□□ 0.57
SNX17-209ENST00000494893 ARMCX5Q6P1M9 558 aa18.6■□□□□ 0.57
SNX17-209ENST00000494893 BRSK2Q8IWQ3 736 aa18.6■□□□□ 0.57
SNX17-209ENST00000494893 SLC22A17Q8WUG5 538 aa18.6■□□□□ 0.57
SNX17-209ENST00000494893 ERCC4Q92889 916 aaPredicted RBP18.6■□□□□ 0.57
SNX17-209ENST00000494893 FAM212AQ96EL1 285 aa18.6■□□□□ 0.57
SNX17-209ENST00000494893 FAM84AQ96KN4 292 aa18.6■□□□□ 0.57
SNX17-209ENST00000494893 KLHL5Q96PQ7 755 aa18.6■□□□□ 0.57
SNX17-209ENST00000494893 ASB2Q96Q27 587 aa18.6■□□□□ 0.57
SNX17-209ENST00000494893 CDCA3Q99618 268 aaPredicted RBP18.6■□□□□ 0.57
SNX17-209ENST00000494893 RXFP1Q9HBX9 757 aa18.6■□□□□ 0.57
SNX17-209ENST00000494893 STK39Q9UEW8 545 aa18.6■□□□□ 0.57
SNX17-209ENST00000494893 BARX2Q9UMQ3 279 aaPredicted RBP18.6■□□□□ 0.57
SNX17-209ENST00000494893 UBQLN1Q9UMX0 589 aaKnown RBP18.6■□□□□ 0.57
SNX17-209ENST00000494893 ANK1P16157 1881 aa18.59■□□□□ 0.57
SNX17-209ENST00000494893 CLIC2O15247 247 aa18.59■□□□□ 0.57
SNX17-209ENST00000494893 URODP06132 367 aa18.59■□□□□ 0.57
SNX17-209ENST00000494893 BMP1P13497 986 aa18.59■□□□□ 0.57
SNX17-209ENST00000494893 CYP3A5P20815 502 aa18.59■□□□□ 0.57
SNX17-209ENST00000494893 RPL9P32969 192 aaKnown RBP18.59■□□□□ 0.57
SNX17-209ENST00000494893 CA8P35219 290 aa18.59■□□□□ 0.57
SNX17-209ENST00000494893 KCNB1Q14721 858 aa18.59■□□□□ 0.57
SNX17-209ENST00000494893 KNOP1Q1ED39 458 aaKnown RBP18.59■□□□□ 0.57
SNX17-209ENST00000494893 USP41Q3LFD5 358 aa18.59■□□□□ 0.57
SNX17-209ENST00000494893 LEXMQ3ZCV2 418 aa18.59■□□□□ 0.57
SNX17-209ENST00000494893 FAM171A1Q5VUB5 890 aa18.59■□□□□ 0.57
SNX17-209ENST00000494893 SCARA3Q6AZY7 606 aa18.59■□□□□ 0.57
SNX17-209ENST00000494893 CAVIN1Q6NZI2 390 aaKnown RBP18.59■□□□□ 0.57
SNX17-209ENST00000494893 LLGL2Q6P1M3 1020 aa18.59■□□□□ 0.57
SNX17-209ENST00000494893 PRSS55Q6UWB4 352 aaPredicted RBP18.59■□□□□ 0.57
SNX17-209ENST00000494893 TMEM184AQ6ZMB5 413 aa18.59■□□□□ 0.57
SNX17-209ENST00000494893 EP400NLQ6ZTU2 488 aa18.59■□□□□ 0.57
SNX17-209ENST00000494893 CBWD2Q8IUF1 395 aa18.59■□□□□ 0.57
SNX17-209ENST00000494893 CD302Q8IX05 232 aa18.59■□□□□ 0.57
SNX17-209ENST00000494893 SYAP1Q96A49 352 aaPredicted RBP18.59■□□□□ 0.57
SNX17-209ENST00000494893 DDX27Q96GQ7 796 aaKnown RBP18.59■□□□□ 0.57
SNX17-209ENST00000494893 FBXL18Q96ME1 805 aa18.59■□□□□ 0.57
SNX17-209ENST00000494893 TIGD1Q96MW7 591 aa18.59■□□□□ 0.57
SNX17-209ENST00000494893 KCTD10Q9H3F6 313 aa18.59■□□□□ 0.57
SNX17-209ENST00000494893 ASB7Q9H672 318 aa18.59■□□□□ 0.57
SNX17-209ENST00000494893 MRPL17Q9NRX2 175 aaKnown RBP18.59■□□□□ 0.57
SNX17-209ENST00000494893 HSPBP1Q9NZL4 362 aa18.59■□□□□ 0.57
SNX17-209ENST00000494893 HCFC2Q9Y5Z7 792 aa18.59■□□□□ 0.57
SNX17-209ENST00000494893 FGFR3P22607 806 aa18.58■□□□□ 0.56
SNX17-209ENST00000494893 CLUL1Q15846 466 aa18.58■□□□□ 0.56
SNX17-209ENST00000494893 KANK3Q6NY19 840 aa18.58■□□□□ 0.56
SNX17-209ENST00000494893 GPD1LQ8N335 351 aa18.58■□□□□ 0.56
SNX17-209ENST00000494893 SPATA20Q8TB22 786 aa18.58■□□□□ 0.56
SNX17-209ENST00000494893 FEZF2Q8TBJ5 459 aa18.58■□□□□ 0.56
SNX17-209ENST00000494893 RIN2Q8WYP3 895 aaPredicted RBP18.58■□□□□ 0.56
SNX17-209ENST00000494893 TMEM63CQ9P1W3 806 aa18.58■□□□□ 0.56
SNX17-209ENST00000494893 DERAQ9Y315 318 aa18.58■□□□□ 0.56
SNX17-209ENST00000494893 VCANP13611 3396 aa18.57■□□□□ 0.56
SNX17-209ENST00000494893 TEX28O15482 410 aa18.57■□□□□ 0.56
SNX17-209ENST00000494893 KINO60870 393 aaKnown RBP18.57■□□□□ 0.56
SNX17-209ENST00000494893 LDHAP00338 332 aaKnown RBP18.57■□□□□ 0.56
SNX17-209ENST00000494893 EPCAMP16422 314 aa18.57■□□□□ 0.56
SNX17-209ENST00000494893 RPL17P18621 184 aaKnown RBP18.57■□□□□ 0.56
SNX17-209ENST00000494893 TKTP29401 623 aaKnown RBP18.57■□□□□ 0.56
SNX17-209ENST00000494893 NDUFV1P49821 464 aa18.57■□□□□ 0.56
SNX17-209ENST00000494893 TMEM132DQ14C87 1099 aa18.57■□□□□ 0.56
SNX17-209ENST00000494893 SYCE2Q6PIF2 218 aa18.57■□□□□ 0.56
SNX17-209ENST00000494893 C12orf56Q8IXR9 622 aa18.57■□□□□ 0.56
SNX17-209ENST00000494893 GPR65Q8IYL9 337 aa18.57■□□□□ 0.56
SNX17-209ENST00000494893 LNX1Q8TBB1 728 aaPredicted RBP18.57■□□□□ 0.56
SNX17-209ENST00000494893 PIK3R5Q8WYR1 880 aa18.57■□□□□ 0.56
SNX17-209ENST00000494893 TSPAN18Q96SJ8 248 aa18.57■□□□□ 0.56
SNX17-209ENST00000494893 TTPALQ9BTX7 342 aa18.57■□□□□ 0.56
SNX17-209ENST00000494893 GZF1Q9H116 711 aaPredicted RBP18.57■□□□□ 0.56
SNX17-209ENST00000494893 PDE11AQ9HCR9 933 aa18.57■□□□□ 0.56
SNX17-209ENST00000494893 RBAKQ9NYW8 714 aaPredicted RBP18.57■□□□□ 0.56
SNX17-209ENST00000494893 C2CD2Q9Y426 696 aa18.57■□□□□ 0.56
SNX17-209ENST00000494893 VWA8A3KMH1 1905 aa18.57■□□□□ 0.56
SNX17-209ENST00000494893 PTPRJQ12913 1337 aa18.56■□□□□ 0.56
SNX17-209ENST00000494893 ANO9A1A5B4 782 aa18.56■□□□□ 0.56
SNX17-209ENST00000494893 GRXCR2A6NFK2 248 aa18.56■□□□□ 0.56
SNX17-209ENST00000494893 KIAA0391O15091 583 aaKnown RBP18.56■□□□□ 0.56
SNX17-209ENST00000494893 ADAM12O43184 909 aa18.56■□□□□ 0.56
SNX17-209ENST00000494893 IL18RAPO95256 599 aa18.56■□□□□ 0.56
SNX17-209ENST00000494893 AARSP49588 968 aaKnown RBP eCLIP18.56■□□□□ 0.56
SNX17-209ENST00000494893 CYP2J2P51589 502 aa18.56■□□□□ 0.56
SNX17-209ENST00000494893 CLCN4P51793 760 aa18.56■□□□□ 0.56
SNX17-209ENST00000494893 SNRPFP62306 86 aaKnown RBP18.56■□□□□ 0.56
SNX17-209ENST00000494893 ELAVL2Q12926 359 aaKnown RBP18.56■□□□□ 0.56
SNX17-209ENST00000494893 BMS1Q14692 1282 aaKnown RBP18.56■□□□□ 0.56
SNX17-209ENST00000494893 TJAP1Q5JTD0 557 aa18.56■□□□□ 0.56
SNX17-209ENST00000494893 CCDC183Q5T5S1 534 aa18.56■□□□□ 0.56
SNX17-209ENST00000494893 RSPO2Q6UXX9 243 aaPredicted RBP18.56■□□□□ 0.56
SNX17-209ENST00000494893 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms