RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 AIMP1Q12904 312 aaKnown RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 CDC16Q13042 620 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 ZBTB17Q13105 803 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 ITGA7Q13683 1181 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 APOFQ13790 326 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 SEPT6Q14141 434 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 LPIN1Q14693 890 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 KIF22Q14807 665 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 TLR1Q15399 786 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 NAB2Q15742 525 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 NTRK3Q16288 839 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 MAN2A1Q16706 1144 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 NDUFA5Q16718 116 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 USP41Q3LFD5 358 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 ZC2HC1CQ53FD0 456 aaPredicted RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 ZNF394Q53GI3 561 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 HSP90AA5PQ58FG0 334 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 MIIPQ5JXC2 388 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 SLC27A3Q5K4L6 730 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 RNFT1Q5M7Z0 435 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 C10orf76Q5T2E6 689 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 IL23RQ5VWK5 629 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 PCNX4Q63HM2 1172 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 SPTY2D1Q68D10 685 aaPredicted RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 TTI2Q6NXR4 508 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 SLC2A7Q6PXP3 512 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 IZUMO2Q6UXV1 221 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 PPP1R21Q6ZMI0 780 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 DTHD1Q6ZMT9 781 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 CAPN12Q6ZSI9 719 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 ARHGEF18Q6ZSZ5 1173 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 PTF1AQ7RTS3 328 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 LYSMD3Q7Z3D4 306 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 KRT26Q7Z3Y9 468 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 PHLDB2Q86SQ0 1253 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 DAAM2Q86T65 1068 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 VSIG1Q86XK7 387 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 IRF2BP1Q8IU81 584 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 LRRC49Q8IUZ0 686 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 KLHL7Q8IXQ5 586 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 KBTBD2Q8IY47 623 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 BBS5Q8N3I7 341 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 ARL10Q8N8L6 244 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 OR6Y1Q8NGX8 325 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 MDM1Q8TC05 714 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 NRG4Q8WWG1 115 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 SYN2Q92777 582 aaPredicted RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 STMN2Q93045 179 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 ABTB1Q969K4 478 aaPredicted RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 SGF29Q96ES7 293 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 EDC3Q96F86 508 aaKnown RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 KAZALD1Q96I82 304 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 MS4A14Q96JA4 679 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 PRICKLE1Q96MT3 831 aaPredicted RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 AIFM3Q96NN9 605 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 BIRC8Q96P09 236 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 NLRP3Q96P20 1036 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 SERPINB12Q96P63 405 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 TGS1Q96RS0 853 aaKnown RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 ZSCAN10Q96SZ4 725 aaPredicted RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 PSMB7Q99436 277 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 GAS2L1Q99501 681 aaPredicted RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 ECSITQ9BQ95 431 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 TUBGCP2Q9BSJ2 902 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 DDX23Q9BUQ8 820 aaKnown RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 TBC1D10AQ9BXI6 508 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 RTFDC1Q9BY42 306 aaPredicted RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 MTFR1LQ9H019 292 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 TSPAN10Q9H1Z9 355 aaPredicted RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 MRPL46Q9H2W6 279 aaKnown RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 DENND2DQ9H6A0 471 aaPredicted RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 SYNCQ9H7C4 482 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 SPON1Q9HCB6 807 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 PFDN4Q9NQP4 134 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 KRT82Q9NSB4 513 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 GJB4Q9NTQ9 266 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 PAG1Q9NWQ8 432 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 ARHGEF38Q9NXL2 777 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 NDE1Q9NXR1 346 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 C9orf78Q9NZ63 289 aaPredicted RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 CEP72Q9P209 647 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 CHPF2Q9P2E5 772 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 NXF1Q9UBU9 619 aaKnown RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 MTRF1LQ9UGC7 380 aaKnown RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 LGALS13Q9UHV8 139 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 HERC5Q9UII4 1024 aaKnown RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 SALL4Q9UJQ4 1053 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 CCPG1Q9ULG6 757 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 TTC7AQ9ULT0 858 aaPredicted RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 PADI4Q9UM07 663 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 TRIM33Q9UPN9 1127 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 CHKBQ9Y259 395 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 R3HDM2Q9Y2K5 976 aaKnown RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 DIS3Q9Y2L1 958 aaKnown RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 UTP11Q9Y3A2 253 aaKnown RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 HBS1LQ9Y450 684 aaKnown RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 TBX22Q9Y458 520 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 PCDHB6Q9Y5E3 794 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 DUSP10Q9Y6W6 482 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms