RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 SLC5A9Q2M3M2 681 aa12.91□□□□□ -0.34
CSNK1E-212ENST00000494610 VARS2Q5ST30 1063 aaKnown RBP12.91□□□□□ -0.34
CSNK1E-212ENST00000494610 AXDND1Q5T1B0 1012 aaPredicted RBP12.91□□□□□ -0.34
CSNK1E-212ENST00000494610 ELMSAN1Q6PJG2 1045 aa12.91□□□□□ -0.34
CSNK1E-212ENST00000494610 ZC3H14Q6PJT7 736 aaKnown RBP12.91□□□□□ -0.34
CSNK1E-212ENST00000494610 TPRG1Q6ZUI0 275 aa12.91□□□□□ -0.34
CSNK1E-212ENST00000494610 IFNLR1Q8IU57 520 aaPredicted RBP12.91□□□□□ -0.34
CSNK1E-212ENST00000494610 NPAS3Q8IXF0 933 aa12.91□□□□□ -0.34
CSNK1E-212ENST00000494610 CCDC51Q96ER9 411 aa12.91□□□□□ -0.34
CSNK1E-212ENST00000494610 TTPALQ9BTX7 342 aa12.91□□□□□ -0.34
CSNK1E-212ENST00000494610 PARD6AQ9NPB6 346 aa12.91□□□□□ -0.34
CSNK1E-212ENST00000494610 LTB4R2Q9NPC1 389 aa12.91□□□□□ -0.34
CSNK1E-212ENST00000494610 HEBP1Q9NRV9 189 aa12.91□□□□□ -0.34
CSNK1E-212ENST00000494610 DDX19AQ9NUU7 478 aaKnown RBP12.91□□□□□ -0.34
CSNK1E-212ENST00000494610 NCDNQ9UBB6 729 aa12.91□□□□□ -0.34
CSNK1E-212ENST00000494610 FBXO2Q9UK22 296 aaPredicted RBP12.91□□□□□ -0.34
CSNK1E-212ENST00000494610 USP24Q9UPU5 2620 aa12.91□□□□□ -0.34
CSNK1E-212ENST00000494610 SF3B1O75533 1304 aaKnown RBP eCLIP12.9□□□□□ -0.34
CSNK1E-212ENST00000494610 LRRIQ4A6NIV6 560 aa12.9□□□□□ -0.34
CSNK1E-212ENST00000494610 DKC1O60832 514 aaKnown RBP eCLIP12.9□□□□□ -0.34
CSNK1E-212ENST00000494610 TGM1P22735 817 aa12.9□□□□□ -0.34
CSNK1E-212ENST00000494610 HOXC13P31276 330 aa12.9□□□□□ -0.34
CSNK1E-212ENST00000494610 RARRES1P49788 294 aa12.9□□□□□ -0.34
CSNK1E-212ENST00000494610 TUSC3Q13454 348 aa12.9□□□□□ -0.34
CSNK1E-212ENST00000494610 TFDP1Q14186 410 aa12.9□□□□□ -0.34
CSNK1E-212ENST00000494610 MXD4Q14582 209 aaPredicted RBP12.9□□□□□ -0.34
CSNK1E-212ENST00000494610 GLRA4Q5JXX5 417 aa12.9□□□□□ -0.34
CSNK1E-212ENST00000494610 LIN9Q5TKA1 542 aa12.9□□□□□ -0.34
CSNK1E-212ENST00000494610 EEF1DP3Q658K8 133 aa12.9□□□□□ -0.34
CSNK1E-212ENST00000494610 TANGO2Q6ICL3 276 aa12.9□□□□□ -0.34
CSNK1E-212ENST00000494610 CD300LGQ6UXG3 332 aa12.9□□□□□ -0.34
CSNK1E-212ENST00000494610 PIK3R5Q8WYR1 880 aa12.9□□□□□ -0.34
CSNK1E-212ENST00000494610 BSNDQ8WZ55 320 aa12.9□□□□□ -0.34
CSNK1E-212ENST00000494610 CHAMP1Q96JM3 812 aa12.9□□□□□ -0.34
CSNK1E-212ENST00000494610 HSD17B14Q9BPX1 270 aa12.9□□□□□ -0.34
CSNK1E-212ENST00000494610 BCO2Q9BYV7 579 aa12.9□□□□□ -0.34
CSNK1E-212ENST00000494610 PDZD7Q9H5P4 517 aa12.9□□□□□ -0.34
CSNK1E-212ENST00000494610 GOLGA2P5Q9HBQ8 144 aa12.9□□□□□ -0.34
CSNK1E-212ENST00000494610 ASPMQ8IZT6 3477 aa12.89□□□□□ -0.35
CSNK1E-212ENST00000494610 VWA3AA6NCI4 1184 aa12.89□□□□□ -0.35
CSNK1E-212ENST00000494610 RECQL4O94761 1208 aa12.89□□□□□ -0.35
CSNK1E-212ENST00000494610 CEBPBP17676 345 aa12.89□□□□□ -0.35
CSNK1E-212ENST00000494610 FXR2P51116 673 aaKnown RBP eCLIP12.89□□□□□ -0.35
CSNK1E-212ENST00000494610 FAM160A1Q05DH4 1040 aa12.89□□□□□ -0.35
CSNK1E-212ENST00000494610 NCBP1Q09161 790 aaKnown RBP12.89□□□□□ -0.35
CSNK1E-212ENST00000494610 MTAPQ13126 283 aa12.89□□□□□ -0.35
CSNK1E-212ENST00000494610 GRM2Q14416 872 aa12.89□□□□□ -0.35
CSNK1E-212ENST00000494610 RESP18Q5W5W9 173 aa12.89□□□□□ -0.35
CSNK1E-212ENST00000494610 HAUS3Q68CZ6 603 aa12.89□□□□□ -0.35
CSNK1E-212ENST00000494610 EXOC8Q8IYI6 725 aa12.89□□□□□ -0.35
CSNK1E-212ENST00000494610 TMEM130Q8N3G9 435 aa12.89□□□□□ -0.35
CSNK1E-212ENST00000494610 FSIP1Q8NA03 581 aa12.89□□□□□ -0.35
CSNK1E-212ENST00000494610 C3orf58Q8NDZ4 430 aa12.89□□□□□ -0.35
CSNK1E-212ENST00000494610 ERMNQ8TAM6 284 aa12.89□□□□□ -0.35
CSNK1E-212ENST00000494610 TCEAL4Q96EI5 215 aa12.89□□□□□ -0.35
CSNK1E-212ENST00000494610 SHDQ96IW2 340 aa12.89□□□□□ -0.35
CSNK1E-212ENST00000494610 KIFC3Q9BVG8 833 aa12.89□□□□□ -0.35
CSNK1E-212ENST00000494610 USP25Q9UHP3 1055 aa12.89□□□□□ -0.35
CSNK1E-212ENST00000494610 HOOK1Q9UJC3 728 aaKnown RBP12.89□□□□□ -0.35
CSNK1E-212ENST00000494610 SMG5Q9UPR3 1016 aaKnown RBP12.89□□□□□ -0.35
CSNK1E-212ENST00000494610 GDAQ9Y2T3 454 aa12.89□□□□□ -0.35
CSNK1E-212ENST00000494610 PPME1Q9Y570 386 aa12.89□□□□□ -0.35
CSNK1E-212ENST00000494610 CDY1Q9Y6F8 540 aa12.89□□□□□ -0.35
CSNK1E-212ENST00000494610 F5P12259 2224 aa12.89□□□□□ -0.35
CSNK1E-212ENST00000494610 TRAK2O60296 914 aa12.88□□□□□ -0.35
CSNK1E-212ENST00000494610 TKTP29401 623 aaKnown RBP12.88□□□□□ -0.35
CSNK1E-212ENST00000494610 TXKP42681 527 aa12.88□□□□□ -0.35
CSNK1E-212ENST00000494610 BRCC3P46736 316 aa12.88□□□□□ -0.35
CSNK1E-212ENST00000494610 PDIA5Q14554 519 aa12.88□□□□□ -0.35
CSNK1E-212ENST00000494610 PABPC1LQ4VXU2 614 aaKnown RBP12.88□□□□□ -0.35
CSNK1E-212ENST00000494610 C4orf32Q8N8J7 132 aa12.88□□□□□ -0.35
CSNK1E-212ENST00000494610 ZBTB44Q8NCP5 570 aa12.88□□□□□ -0.35
CSNK1E-212ENST00000494610 ATRIPQ8WXE1 791 aa12.88□□□□□ -0.35
CSNK1E-212ENST00000494610 MTMR9Q96QG7 549 aa12.88□□□□□ -0.35
CSNK1E-212ENST00000494610 CCDC39Q9UFE4 941 aa12.88□□□□□ -0.35
CSNK1E-212ENST00000494610 FBXO4Q9UKT5 387 aa12.88□□□□□ -0.35
CSNK1E-212ENST00000494610 NDRG2Q9UN36 371 aaKnown RBP12.88□□□□□ -0.35
CSNK1E-212ENST00000494610 FAM237AA0A1B0GTK4 181 aa12.87□□□□□ -0.35
CSNK1E-212ENST00000494610 DGAT1O75907 488 aa12.87□□□□□ -0.35
CSNK1E-212ENST00000494610 THP07101 528 aa12.87□□□□□ -0.35
CSNK1E-212ENST00000494610 HNRNPA1P09651 372 aaKnown RBP eCLIP12.87□□□□□ -0.35
CSNK1E-212ENST00000494610 SPATA31C1P0DKV0 1188 aa12.87□□□□□ -0.35
CSNK1E-212ENST00000494610 FCARP24071 287 aa12.87□□□□□ -0.35
CSNK1E-212ENST00000494610 UBA7P41226 1012 aa12.87□□□□□ -0.35
CSNK1E-212ENST00000494610 CCR2P41597 374 aa12.87□□□□□ -0.35
CSNK1E-212ENST00000494610 CLCNKBP51801 687 aa12.87□□□□□ -0.35
CSNK1E-212ENST00000494610 PRKCQQ04759 706 aa12.87□□□□□ -0.35
CSNK1E-212ENST00000494610 POU5F1BQ06416 359 aa12.87□□□□□ -0.35
CSNK1E-212ENST00000494610 ZNF528Q3MIS6 628 aa12.87□□□□□ -0.35
CSNK1E-212ENST00000494610 ZBTB41Q5SVQ8 909 aa12.87□□□□□ -0.35
CSNK1E-212ENST00000494610 MTSS1LQ765P7 747 aa12.87□□□□□ -0.35
CSNK1E-212ENST00000494610 GPR65Q8IYL9 337 aa12.87□□□□□ -0.35
CSNK1E-212ENST00000494610 HACE1Q8IYU2 909 aa12.87□□□□□ -0.35
CSNK1E-212ENST00000494610 KCTD17Q8N5Z5 321 aa12.87□□□□□ -0.35
CSNK1E-212ENST00000494610 RASSF8Q8NHQ8 419 aa12.87□□□□□ -0.35
CSNK1E-212ENST00000494610 TMEM60Q9H2L4 133 aa12.87□□□□□ -0.35
CSNK1E-212ENST00000494610 FZD8Q9H461 694 aa12.87□□□□□ -0.35
CSNK1E-212ENST00000494610 TTC12Q9H892 705 aaPredicted RBP12.87□□□□□ -0.35
CSNK1E-212ENST00000494610 MAGEF1Q9HAY2 307 aa12.87□□□□□ -0.35
CSNK1E-212ENST00000494610 ANKEF1Q9NU02 776 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms