RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 SNRNP35Q16560 246 aaKnown RBP20.16■□□□□ 0.82
COL27A1-207ENST00000494090 REXO1L1PQ8IX06 675 aa20.16■□□□□ 0.82
COL27A1-207ENST00000494090 USP38Q8NB14 1042 aa20.16■□□□□ 0.82
COL27A1-207ENST00000494090 SLC30A5Q8TAD4 765 aa20.16■□□□□ 0.82
COL27A1-207ENST00000494090 PLEKHA5Q9HAU0 1116 aa20.16■□□□□ 0.82
COL27A1-207ENST00000494090 RAD23BP54727 409 aa20.16■□□□□ 0.82
COL27A1-207ENST00000494090 ACTR2P61160 394 aa20.16■□□□□ 0.82
COL27A1-207ENST00000494090 RBM15Q96T37 977 aaKnown RBP eCLIP20.16■□□□□ 0.821e-6■□□□□ 9.5
COL27A1-207ENST00000494090 PARK7Q99497 189 aaKnown RBP20.16■□□□□ 0.82
COL27A1-207ENST00000494090 LSM7Q9UK45 103 aaKnown RBP20.16■□□□□ 0.82
COL27A1-207ENST00000494090 PIK3R2O00459 728 aa20.16■□□□□ 0.82
COL27A1-207ENST00000494090 AARSP49588 968 aaKnown RBP eCLIP20.16■□□□□ 0.82
COL27A1-207ENST00000494090 LBRQ14739 615 aaKnown RBP20.16■□□□□ 0.82
COL27A1-207ENST00000494090 P3H1Q32P28 736 aa20.16■□□□□ 0.82
COL27A1-207ENST00000494090 HABP4Q5JVS0 413 aaKnown RBP20.16■□□□□ 0.82
COL27A1-207ENST00000494090 XRRA1Q6P2D8 792 aa20.16■□□□□ 0.82
COL27A1-207ENST00000494090 RAET1EQ8TD07 263 aa20.16■□□□□ 0.82
COL27A1-207ENST00000494090 PIN4Q9Y237 131 aaKnown RBP20.16■□□□□ 0.82
COL27A1-207ENST00000494090 NTSR2O95665 410 aa20.16■□□□□ 0.82
COL27A1-207ENST00000494090 GH1P01241 217 aa20.16■□□□□ 0.82
COL27A1-207ENST00000494090 RPA1P27694 616 aa20.16■□□□□ 0.82
COL27A1-207ENST00000494090 ATP6V1E1P36543 226 aa20.16■□□□□ 0.82
COL27A1-207ENST00000494090 MTMR2Q13614 643 aa20.16■□□□□ 0.82
COL27A1-207ENST00000494090 SZRD1Q7Z422 152 aa20.16■□□□□ 0.82
COL27A1-207ENST00000494090 SH3KBP1Q96B97 665 aa20.16■□□□□ 0.82
COL27A1-207ENST00000494090 ISCUQ9H1K1 167 aa20.16■□□□□ 0.82
COL27A1-207ENST00000494090 SARS2Q9NP81 518 aaKnown RBP20.16■□□□□ 0.82
COL27A1-207ENST00000494090 P4HA2O15460 535 aa20.15■□□□□ 0.82
COL27A1-207ENST00000494090 KLK7P49862 253 aa20.15■□□□□ 0.82
COL27A1-207ENST00000494090 GRIN1Q05586 938 aa20.15■□□□□ 0.82
COL27A1-207ENST00000494090 YAF2Q8IY57 180 aa20.15■□□□□ 0.82
COL27A1-207ENST00000494090 RAPGEF5Q92565 580 aa20.15■□□□□ 0.82
COL27A1-207ENST00000494090 EML4Q9HC35 981 aaKnown RBP20.15■□□□□ 0.82
COL27A1-207ENST00000494090 MAFGO15525 162 aa20.15■□□□□ 0.82
COL27A1-207ENST00000494090 SSTR3P32745 418 aaPredicted RBP20.15■□□□□ 0.82
COL27A1-207ENST00000494090 KLHDC7AQ5VTJ3 777 aa20.15■□□□□ 0.82
COL27A1-207ENST00000494090 ANO5Q75V66 913 aa20.15■□□□□ 0.82
COL27A1-207ENST00000494090 PID1Q7Z2X4 250 aa20.15■□□□□ 0.82
COL27A1-207ENST00000494090 JAMLQ86YT9 394 aa20.15■□□□□ 0.82
COL27A1-207ENST00000494090 ANKMY2Q8IV38 441 aa20.15■□□□□ 0.82
COL27A1-207ENST00000494090 APPL2Q8NEU8 664 aa20.15■□□□□ 0.82
COL27A1-207ENST00000494090 CPA5Q8WXQ8 436 aa20.15■□□□□ 0.82
COL27A1-207ENST00000494090 XPO6Q96QU8 1125 aaKnown RBP20.15■□□□□ 0.82
COL27A1-207ENST00000494090 MED15Q96RN5 788 aa20.15■□□□□ 0.82
COL27A1-207ENST00000494090 SIK2Q9H0K1 926 aa20.15■□□□□ 0.82
COL27A1-207ENST00000494090 SLC25A27O95847 323 aa20.15■□□□□ 0.82
COL27A1-207ENST00000494090 TPI1P60174 286 aa20.15■□□□□ 0.82
COL27A1-207ENST00000494090 TRADDQ15628 312 aa20.15■□□□□ 0.82
COL27A1-207ENST00000494090 ANKS1AQ92625 1134 aa20.15■□□□□ 0.82
COL27A1-207ENST00000494090 SGSM3Q96HU1 749 aa20.15■□□□□ 0.82
COL27A1-207ENST00000494090 TSSK1BQ9BXA7 367 aa20.15■□□□□ 0.82
COL27A1-207ENST00000494090 ROPN1BQ9BZX4 212 aaPredicted RBP20.15■□□□□ 0.82
COL27A1-207ENST00000494090 ROPN1Q9HAT0 212 aaPredicted RBP20.15■□□□□ 0.82
COL27A1-207ENST00000494090 PDHA1P08559 390 aa20.15■□□□□ 0.82
COL27A1-207ENST00000494090 SNAPC2Q13487 334 aa20.15■□□□□ 0.82
COL27A1-207ENST00000494090 SNX17Q15036 470 aa20.15■□□□□ 0.82
COL27A1-207ENST00000494090 TAS2R42Q7RTR8 314 aa20.15■□□□□ 0.82
COL27A1-207ENST00000494090 TBC1D19Q8N5T2 526 aa20.15■□□□□ 0.82
COL27A1-207ENST00000494090 NOA1Q8NC60 698 aaKnown RBP20.15■□□□□ 0.82
COL27A1-207ENST00000494090 ZNF280CQ8ND82 737 aa20.15■□□□□ 0.82
COL27A1-207ENST00000494090 SLC26A7Q8TE54 656 aa20.15■□□□□ 0.82
COL27A1-207ENST00000494090 L2HGDHQ9H9P8 463 aa20.15■□□□□ 0.82
COL27A1-207ENST00000494090 JMJD4Q9H9V9 463 aa20.15■□□□□ 0.82
COL27A1-207ENST00000494090 CD4P01730 458 aa20.14■□□□□ 0.82
COL27A1-207ENST00000494090 RBM43Q6ZSC3 357 aaKnown RBP20.14■□□□□ 0.82
COL27A1-207ENST00000494090 CHCHD3Q9NX63 227 aaKnown RBP20.14■□□□□ 0.82
COL27A1-207ENST00000494090 PIGHQ14442 188 aaPredicted RBP20.14■□□□□ 0.81
COL27A1-207ENST00000494090 LRRC23Q53EV4 343 aaPredicted RBP20.14■□□□□ 0.81
COL27A1-207ENST00000494090 MICALL2Q8IY33 904 aa20.14■□□□□ 0.81
COL27A1-207ENST00000494090 PPHLN1Q8NEY8 458 aaKnown RBP20.14■□□□□ 0.81
COL27A1-207ENST00000494090 KDM4CQ9H3R0 1056 aa20.14■□□□□ 0.81
COL27A1-207ENST00000494090 NDFIP2Q9NV92 336 aa20.14■□□□□ 0.81
COL27A1-207ENST00000494090 SLC38A7Q9NVC3 462 aa20.14■□□□□ 0.81
COL27A1-207ENST00000494090 USP15Q9Y4E8 981 aaPredicted RBP20.14■□□□□ 0.81
COL27A1-207ENST00000494090 ALDH1A1P00352 501 aa20.14■□□□□ 0.81
COL27A1-207ENST00000494090 SGSM1Q2NKQ1 1148 aa20.14■□□□□ 0.81
COL27A1-207ENST00000494090 ANO4Q32M45 955 aa20.14■□□□□ 0.81
COL27A1-207ENST00000494090 RMDN1Q96DB5 314 aa20.14■□□□□ 0.81
COL27A1-207ENST00000494090 PCDHGB4Q9UN71 923 aa20.14■□□□□ 0.81
COL27A1-207ENST00000494090 ABCA9Q8IUA7 1624 aa20.14■□□□□ 0.81
COL27A1-207ENST00000494090 IL18RAPO95256 599 aa20.14■□□□□ 0.81
COL27A1-207ENST00000494090 IER5Q5VY09 327 aa20.14■□□□□ 0.81
COL27A1-207ENST00000494090 CDC42EP5Q6NZY7 148 aa20.14■□□□□ 0.81
COL27A1-207ENST00000494090 TRAPPC11Q7Z392 1133 aa20.14■□□□□ 0.81
COL27A1-207ENST00000494090 SCFD1Q8WVM8 642 aa20.14■□□□□ 0.81
COL27A1-207ENST00000494090 SPON1Q9HCB6 807 aa20.14■□□□□ 0.81
COL27A1-207ENST00000494090 PRR12Q9ULL5 1215 aa20.14■□□□□ 0.81
COL27A1-207ENST00000494090 LONRF1Q17RB8 773 aa20.13■□□□□ 0.81
COL27A1-207ENST00000494090 WDR72Q3MJ13 1102 aa20.13■□□□□ 0.81
COL27A1-207ENST00000494090 TTC30AQ86WT1 665 aa20.13■□□□□ 0.81
COL27A1-207ENST00000494090 KRT35Q92764 455 aa20.13■□□□□ 0.81
COL27A1-207ENST00000494090 ABTB1Q969K4 478 aaPredicted RBP20.13■□□□□ 0.81
COL27A1-207ENST00000494090 PBXIP1Q96AQ6 731 aa20.13■□□□□ 0.81
COL27A1-207ENST00000494090 ZIM3Q96PE6 472 aa20.13■□□□□ 0.81
COL27A1-207ENST00000494090 SMARCAL1Q9NZC9 954 aa20.13■□□□□ 0.81
COL27A1-207ENST00000494090 SNX5Q9Y5X3 404 aa20.13■□□□□ 0.81
COL27A1-207ENST00000494090 F5H423 210 aaPredicted RBP20.13■□□□□ 0.81
COL27A1-207ENST00000494090 DCUN1D1Q96GG9 259 aa20.13■□□□□ 0.81
COL27A1-207ENST00000494090 ZNF668Q96K58 619 aaPredicted RBP20.13■□□□□ 0.81
COL27A1-207ENST00000494090 ING2Q9H160 280 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms