RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 PDCL2Q8N4E4 241 aa2.96□□□□□ -1.94
CDC42EP3-205ENST00000494083 ARMC5Q96C12 935 aa2.96□□□□□ -1.94
CDC42EP3-205ENST00000494083 TMEM176AQ96HP8 235 aa2.96□□□□□ -1.94
CDC42EP3-205ENST00000494083 TUBE1Q9UJT0 475 aa2.96□□□□□ -1.94
CDC42EP3-205ENST00000494083 ZFR2Q9UPR6 939 aaKnown RBP2.96□□□□□ -1.94
CDC42EP3-205ENST00000494083 NR2E1Q9Y466 385 aa2.96□□□□□ -1.94
CDC42EP3-205ENST00000494083 CAVIN2O95810 425 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 CHGBP05060 677 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 JMJD7P0C870 316 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 ZNF18P17022 549 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 KIF11P52732 1056 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 DGCR2P98153 550 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 ADAM15Q13444 863 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 TNFAIP8L3Q5GJ75 292 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 ZSCAN25Q6NSZ9 544 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 RPUSD2Q8IZ73 545 aaKnown RBP2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 C2orf69Q8N8R5 385 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 STAG1Q8WVM7 1258 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 WNK4Q96J92 1243 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 TMX3Q96JJ7 454 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 AGO3Q9H9G7 860 aaKnown RBP2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 SAMD15Q9P1V8 674 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 TSC22D4Q9Y3Q8 395 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 PARNO95453 639 aaKnown RBP2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 ALADP13716 330 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 CR2P20023 1033 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 MECP2P51608 486 aaKnown RBP2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 UBE2HP62256 183 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 TOB2Q14106 344 aaPredicted RBP2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 EIF4HQ15056 248 aaKnown RBP2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 STILQ15468 1287 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 SURF1Q15526 300 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 ZCCHC8Q6NZY4 707 aaKnown RBP2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 KCNV1Q6PIU1 500 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 UNQ6494/PRO21346Q6UXR6 183 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 EXOC8Q8IYI6 725 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 SLC16A11Q8NCK7 471 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 KAZALD1Q96I82 304 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 FUT8Q9BYC5 575 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 KIF3AQ9Y496 699 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 PAXBP1Q9Y5B6 917 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 CD2APQ9Y5K6 639 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 TNS1Q9HBL0 1735 aaKnown RBP2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 SLC12A8A0AV02 714 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 C1QTNF3-AMACRE9PGA6 284 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 TRAF5O00463 557 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 SLPIP03973 132 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 EPB41P11171 864 aaKnown RBP2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 ECE1P42892 770 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 SELENOPP49908 381 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 ANTXR2P58335 489 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 HERVK_113P62684 666 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 EXOSC9Q06265 439 aaKnown RBP2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 PIK3R6Q5UE93 754 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 VPS53Q5VIR6 699 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 ESRP1Q6NXG1 681 aaKnown RBP2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 UBE3BQ7Z3V4 1068 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 YTHDF3Q7Z739 585 aaKnown RBP2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 TSPYL6Q8N831 410 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 MED15Q96RN5 788 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 CLSTN2Q9H4D0 955 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 TMA7Q9Y2S6 64 aaKnown RBP2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 RIPOR2Q9Y4F9 1068 aa2.95□□□□□ -1.94
CDC42EP3-205ENST00000494083 MUSKO15146 869 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 GSTA4O15217 222 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 KCNQ2O43526 872 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 EFCAB14O75071 495 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 LCA5LO95447 670 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 PRLP01236 227 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 SLC9A1P19634 815 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 ZNF75DP51815 510 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 PDE1AP54750 535 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 HGFACQ04756 655 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 FOXL1Q12952 345 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 GRAMD4Q6IC98 578 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 WDR93Q6P2C0 686 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 FBXO38Q6PIJ6 1188 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 C6orf89Q6UWU4 347 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 DLG3Q92796 817 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 PGBD1Q96JS3 809 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 PHACTR3Q96KR7 559 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 SEMA4AQ9H3S1 761 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 VIPAS39Q9H9C1 493 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 SNX14Q9Y5W7 946 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 ANAPC1Q9H1A4 1944 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 TMEM2Q9UHN6 1383 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 EVC2Q86UK5 1308 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 LOC102724159A0A0B4J2E5 919 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 PTPDC1A2A3K4 754 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 ZNF891A8MT65 544 aaPredicted RBP2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 OPA1O60313 960 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 LARGE1O95461 756 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 CTDNEP1O95476 244 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 ASMTLO95671 621 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 ACO1P21399 889 aaKnown RBP2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 RFX5P48382 616 aaPredicted RBP2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 ITIH3Q06033 890 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 PWP2Q15269 919 aaKnown RBP2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 GLIPR1L2Q4G1C9 344 aa2.94□□□□□ -1.94
CDC42EP3-205ENST00000494083 CREB3L3Q68CJ9 461 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms