RNA–Protein interactions for RNA: ENST00000494051.1

SSB-212, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 392 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-212ENST00000494051 MAP3K2Q9Y2U5 619 aa7.09□□□□□ -1.27
SSB-212ENST00000494051 FPGT-TNNI3KV9GXZ4 949 aa7.09□□□□□ -1.27
SSB-212ENST00000494051 LRRC14BA6NHZ5 514 aa7.08□□□□□ -1.28
SSB-212ENST00000494051 AKAP10O43572 662 aa7.08□□□□□ -1.28
SSB-212ENST00000494051 AKAP8O43823 692 aaKnown RBP7.08□□□□□ -1.28
SSB-212ENST00000494051 ABLIM3O94929 683 aa7.08□□□□□ -1.28
SSB-212ENST00000494051 CD1AP06126 327 aa7.08□□□□□ -1.28
SSB-212ENST00000494051 POU2F2P09086 479 aa7.08□□□□□ -1.28
SSB-212ENST00000494051 TLE1Q04724 770 aa7.08□□□□□ -1.28
SSB-212ENST00000494051 PIN1Q13526 163 aaPredicted RBP7.08□□□□□ -1.28
SSB-212ENST00000494051 PABPC1LQ4VXU2 614 aaKnown RBP7.08□□□□□ -1.28
SSB-212ENST00000494051 KCNV1Q6PIU1 500 aa7.08□□□□□ -1.28
SSB-212ENST00000494051 MRGPREQ86SM8 312 aa7.08□□□□□ -1.28
SSB-212ENST00000494051 TBC1D15Q8TC07 691 aa7.08□□□□□ -1.28
SSB-212ENST00000494051 PROKR1Q8TCW9 393 aa7.08□□□□□ -1.28
SSB-212ENST00000494051 LENG9Q96B70 501 aa7.08□□□□□ -1.28
SSB-212ENST00000494051 ZSWIM1Q9BR11 485 aa7.08□□□□□ -1.28
SSB-212ENST00000494051 MAN1C1Q9NR34 630 aa7.08□□□□□ -1.28
SSB-212ENST00000494051 SRRDQ9UH36 339 aa7.08□□□□□ -1.28
SSB-212ENST00000494051 LPXNO60711 386 aa7.07□□□□□ -1.28
SSB-212ENST00000494051 PPFIA4O75335 1185 aa7.07□□□□□ -1.28
SSB-212ENST00000494051 HAUS5O94927 633 aa7.07□□□□□ -1.28
SSB-212ENST00000494051 ABHD16AO95870 558 aa7.07□□□□□ -1.28
SSB-212ENST00000494051 HLA-DOAP06340 250 aa7.07□□□□□ -1.28
SSB-212ENST00000494051 CKBP12277 381 aa7.07□□□□□ -1.28
SSB-212ENST00000494051 VCAM1P19320 739 aa7.07□□□□□ -1.28
SSB-212ENST00000494051 SMARCA1P28370 1054 aa7.07□□□□□ -1.28
SSB-212ENST00000494051 EPHB1P54762 984 aa7.07□□□□□ -1.28
SSB-212ENST00000494051 KLF10Q13118 480 aa7.07□□□□□ -1.28
SSB-212ENST00000494051 PLEKHG6Q3KR16 790 aa7.07□□□□□ -1.28
SSB-212ENST00000494051 LRRC55Q6ZSA7 311 aa7.07□□□□□ -1.28
SSB-212ENST00000494051 ANKRD13AQ8IZ07 590 aa7.07□□□□□ -1.28
SSB-212ENST00000494051 CPEB3Q8NE35 698 aaKnown RBP7.07□□□□□ -1.28
SSB-212ENST00000494051 JPH3Q8WXH2 748 aaPredicted RBP7.07□□□□□ -1.28
SSB-212ENST00000494051 MYEOVQ96EZ4 313 aa7.07□□□□□ -1.28
SSB-212ENST00000494051 MLST8Q9BVC4 326 aa7.07□□□□□ -1.28
SSB-212ENST00000494051 GTPBP4Q9BZE4 634 aaKnown RBP7.07□□□□□ -1.28
SSB-212ENST00000494051 RNPEPQ9H4A4 650 aa7.07□□□□□ -1.28
SSB-212ENST00000494051 AATKQ6ZMQ8 1374 aa7.07□□□□□ -1.28
SSB-212ENST00000494051 A0A1B0GTW7 788 aa7.06□□□□□ -1.28
SSB-212ENST00000494051 E2F8A0AVK6 867 aa7.06□□□□□ -1.28
SSB-212ENST00000494051 CYR61O00622 381 aa7.06□□□□□ -1.28
SSB-212ENST00000494051 MALP21145 153 aa7.06□□□□□ -1.28
SSB-212ENST00000494051 GCSHP23434 173 aa7.06□□□□□ -1.28
SSB-212ENST00000494051 AKAP5P24588 427 aa7.06□□□□□ -1.28
SSB-212ENST00000494051 SLC6A4P31645 630 aa7.06□□□□□ -1.28
SSB-212ENST00000494051 FXR1P51114 621 aaKnown RBP eCLIP7.06□□□□□ -1.28
SSB-212ENST00000494051 NOMO3P69849 1222 aa7.06□□□□□ -1.28
SSB-212ENST00000494051 MXRA7P84157 204 aa7.06□□□□□ -1.28
SSB-212ENST00000494051 RESTQ13127 1097 aa7.06□□□□□ -1.28
SSB-212ENST00000494051 PGS1Q32NB8 556 aa7.06□□□□□ -1.28
SSB-212ENST00000494051 BEAN1Q3B7T3 259 aa7.06□□□□□ -1.28
SSB-212ENST00000494051 NOMO2Q5JPE7 1267 aa7.06□□□□□ -1.28
SSB-212ENST00000494051 LY6G5CQ5SRR4 150 aa7.06□□□□□ -1.28
SSB-212ENST00000494051 RHOUQ7L0Q8 258 aa7.06□□□□□ -1.28
SSB-212ENST00000494051 MAPKAPK5Q8IW41 473 aa7.06□□□□□ -1.28
SSB-212ENST00000494051 PRR18Q8N4B5 295 aa7.06□□□□□ -1.28
SSB-212ENST00000494051 C3orf20Q8ND61 904 aa7.06□□□□□ -1.28
SSB-212ENST00000494051 IL17RDQ8NFM7 739 aa7.06□□□□□ -1.28
SSB-212ENST00000494051 LARP4BQ92615 738 aaKnown RBP7.06□□□□□ -1.28
SSB-212ENST00000494051 MARS2Q96GW9 593 aaKnown RBP7.06□□□□□ -1.28
SSB-212ENST00000494051 NUP88Q99567 741 aaPredicted RBP7.06□□□□□ -1.28
SSB-212ENST00000494051 PACSIN1Q9BY11 444 aa7.06□□□□□ -1.28
SSB-212ENST00000494051 RHOBTB2Q9BYZ6 727 aa7.06□□□□□ -1.28
SSB-212ENST00000494051 ANKFY1Q9P2R3 1169 aa7.06□□□□□ -1.28
SSB-212ENST00000494051 USP25Q9UHP3 1055 aa7.06□□□□□ -1.28
SSB-212ENST00000494051 ING1Q9UK53 422 aaPredicted RBP7.06□□□□□ -1.28
SSB-212ENST00000494051 PCDHA3Q9Y5H8 950 aa7.06□□□□□ -1.28
SSB-212ENST00000494051 CENPVL1A0A0U1RR11 272 aa7.05□□□□□ -1.28
SSB-212ENST00000494051 UNC119BA6NIH7 251 aa7.05□□□□□ -1.28
SSB-212ENST00000494051 S100BP04271 92 aaPredicted RBP7.05□□□□□ -1.28
SSB-212ENST00000494051 CFIP05156 583 aa7.05□□□□□ -1.28
SSB-212ENST00000494051 FGFR4P22455 802 aa7.05□□□□□ -1.28
SSB-212ENST00000494051 DDX6P26196 483 aaKnown RBP eCLIP7.05□□□□□ -1.28
SSB-212ENST00000494051 HSD11B2P80365 405 aa7.05□□□□□ -1.28
SSB-212ENST00000494051 OCA2Q04671 838 aa7.05□□□□□ -1.28
SSB-212ENST00000494051 SNAPC2Q13487 334 aa7.05□□□□□ -1.28
SSB-212ENST00000494051 FHL2Q14192 279 aa7.05□□□□□ -1.28
SSB-212ENST00000494051 PTPAQ15257 358 aa7.05□□□□□ -1.28
SSB-212ENST00000494051 UTP14CQ5TAP6 766 aaKnown RBP7.05□□□□□ -1.28
SSB-212ENST00000494051 THEMIS2Q5TEJ8 643 aa7.05□□□□□ -1.28
SSB-212ENST00000494051 RTFDC1Q9BY42 306 aaPredicted RBP7.05□□□□□ -1.28
SSB-212ENST00000494051 ZIM2Q9NZV7 527 aa7.05□□□□□ -1.28
SSB-212ENST00000494051 POLHQ9Y253 713 aa7.05□□□□□ -1.28
SSB-212ENST00000494051 THRAP3Q9Y2W1 955 aaKnown RBP7.05□□□□□ -1.28
SSB-212ENST00000494051 CCDC78A2IDD5 438 aa7.04□□□□□ -1.28
SSB-212ENST00000494051 TMEM200CA6NKL6 621 aa7.04□□□□□ -1.28
SSB-212ENST00000494051 AGFG2O95081 481 aa7.04□□□□□ -1.28
SSB-212ENST00000494051 GPANK1O95872 356 aa7.04□□□□□ -1.28
SSB-212ENST00000494051 FTLP02792 175 aaPredicted RBP7.04□□□□□ -1.28
SSB-212ENST00000494051 ELANEP08246 267 aa7.04□□□□□ -1.28
SSB-212ENST00000494051 SPDYE7PQ495Y7 208 aa7.04□□□□□ -1.28
SSB-212ENST00000494051 IFIT1BQ5T764 474 aaKnown RBP7.04□□□□□ -1.28
SSB-212ENST00000494051 FOXR2Q6PJQ5 311 aa7.04□□□□□ -1.28
SSB-212ENST00000494051 SLC4A10Q6U841 1118 aa7.04□□□□□ -1.28
SSB-212ENST00000494051 RAVER1Q8IY67 606 aaKnown RBP7.04□□□□□ -1.28
SSB-212ENST00000494051 GRAMD1CQ8IYS0 662 aa7.04□□□□□ -1.28
SSB-212ENST00000494051 TMEM132CQ8N3T6 1108 aa7.04□□□□□ -1.28
SSB-212ENST00000494051 NUP133Q8WUM0 1156 aa7.04□□□□□ -1.28
SSB-212ENST00000494051 RGMAQ96B86 450 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms