RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 OR6B3Q8NGW1 331 aa7.45□□□□□ -1.22
SMC2-205ENST00000493955 OR14K1Q8NGZ2 314 aa7.45□□□□□ -1.22
SMC2-205ENST00000493955 PWWP2AQ96N64 755 aa7.45□□□□□ -1.22
SMC2-205ENST00000493955 ZDHHC8Q9ULC8 765 aa7.45□□□□□ -1.22
SMC2-205ENST00000493955 MED16Q9Y2X0 877 aa7.45□□□□□ -1.22
SMC2-205ENST00000493955 PCDHGB2Q9Y5G2 931 aa7.45□□□□□ -1.22
SMC2-205ENST00000493955 A0A087WV62 115 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 hCG_1642624A0A1W2PR95 340 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 GRM6O15303 877 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 SH3BP5O60239 455 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 MATN4O95460 622 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 GNAI3P08754 354 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 RAP2AP10114 183 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 TECP42680 631 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 GNAI1P63096 354 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 HGFACQ04756 655 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 EXOSC9Q06265 439 aaKnown RBP7.44□□□□□ -1.22
SMC2-205ENST00000493955 PABPC1LQ4VXU2 614 aaKnown RBP7.44□□□□□ -1.22
SMC2-205ENST00000493955 VWA3BQ502W6 1294 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 FAM47AQ5JRC9 791 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 OR5M3Q8NGP4 307 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 ARL8AQ96BM9 186 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 NMD3Q96D46 503 aaKnown RBP7.44□□□□□ -1.22
SMC2-205ENST00000493955 BRIP1Q9BX63 1249 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 KRTAP4-9Q9BYQ8 210 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 ADAM7Q9H2U9 754 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 SACM1LQ9NTJ5 587 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 COL20A1Q9P218 1284 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 A0A1W2PPC4 97 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 SH3D21A4FU49 640 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 ADAMTS3O15072 1205 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 HDCP19113 662 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 KCNJ5P48544 419 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 ADAM8P78325 824 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 CAP1Q01518 475 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 APBA1Q02410 837 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 CCDC93Q567U6 631 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 MFSD14BQ5SR56 506 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 OTUD7BQ6GQQ9 843 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 CCDC174Q6PII3 467 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 ZNF783Q6ZMS7 281 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 RALYLQ86SE5 291 aaKnown RBP7.44□□□□□ -1.22
SMC2-205ENST00000493955 CMTM4Q8IZR5 234 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 OR10H5Q8NGA6 315 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 CEP95Q96GE4 821 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 TMEM41AQ96HV5 264 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 RPL10LQ96L21 214 aaKnown RBP7.44□□□□□ -1.22
SMC2-205ENST00000493955 DPH1Q9BZG8 443 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 SLAMF7Q9NQ25 335 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 NCDNQ9UBB6 729 aa7.44□□□□□ -1.22
SMC2-205ENST00000493955 C9orf118A6NHY6 69 aa7.43□□□□□ -1.22
SMC2-205ENST00000493955 ETV2O00321 342 aaPredicted RBP7.43□□□□□ -1.22
SMC2-205ENST00000493955 ARHGAP6O43182 974 aa7.43□□□□□ -1.22
SMC2-205ENST00000493955 SASH1O94885 1247 aa7.43□□□□□ -1.22
SMC2-205ENST00000493955 MTHFD1P11586 935 aaKnown RBP7.43□□□□□ -1.22
SMC2-205ENST00000493955 CHKAP35790 457 aa7.43□□□□□ -1.22
SMC2-205ENST00000493955 SARSP49591 514 aaKnown RBP7.43□□□□□ -1.22
SMC2-205ENST00000493955 GZMKP49863 264 aa7.43□□□□□ -1.22
SMC2-205ENST00000493955 PTH1RQ03431 593 aa7.43□□□□□ -1.22
SMC2-205ENST00000493955 ICA1Q05084 483 aa7.43□□□□□ -1.22
SMC2-205ENST00000493955 POU5F1BQ06416 359 aa7.43□□□□□ -1.22
SMC2-205ENST00000493955 ACAP1Q15027 740 aa7.43□□□□□ -1.22
SMC2-205ENST00000493955 TBR1Q16650 682 aa7.43□□□□□ -1.22
SMC2-205ENST00000493955 C3orf38Q5JPI3 329 aa7.43□□□□□ -1.22
SMC2-205ENST00000493955 FAM26FQ5R3K3 315 aa7.43□□□□□ -1.22
SMC2-205ENST00000493955 KLHDC7AQ5VTJ3 777 aa7.43□□□□□ -1.22
SMC2-205ENST00000493955 MCTP2Q6DN12 878 aa7.43□□□□□ -1.22
SMC2-205ENST00000493955 SEM1Q6ZVN7 128 aa7.43□□□□□ -1.22
SMC2-205ENST00000493955 SPATA5Q8NB90 893 aa7.43□□□□□ -1.22
SMC2-205ENST00000493955 TXNDC5Q8NBS9 432 aaKnown RBP7.43□□□□□ -1.22
SMC2-205ENST00000493955 IL17RDQ8NFM7 739 aa7.43□□□□□ -1.22
SMC2-205ENST00000493955 PNISRQ8TF01 805 aaKnown RBP7.43□□□□□ -1.22
SMC2-205ENST00000493955 ATXN2LQ8WWM7 1075 aaKnown RBP7.43□□□□□ -1.22
SMC2-205ENST00000493955 CCT6BQ92526 530 aa7.43□□□□□ -1.22
SMC2-205ENST00000493955 ENKD1Q9H0I2 346 aa7.43□□□□□ -1.22
SMC2-205ENST00000493955 KCNH6Q9H252 994 aa7.43□□□□□ -1.22
SMC2-205ENST00000493955 SRRDQ9UH36 339 aa7.43□□□□□ -1.22
SMC2-205ENST00000493955 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.43□□□□□ -1.22
SMC2-205ENST00000493955 ZMYM3Q14202 1370 aa7.43□□□□□ -1.22
SMC2-205ENST00000493955 TRIM43BA6NCK2 446 aa7.42□□□□□ -1.22
SMC2-205ENST00000493955 SBK3P0C264 359 aa7.42□□□□□ -1.22
SMC2-205ENST00000493955 HARSP12081 509 aaKnown RBP7.42□□□□□ -1.22
SMC2-205ENST00000493955 ATP5JP18859 108 aa7.42□□□□□ -1.22
SMC2-205ENST00000493955 PI3P19957 117 aa7.42□□□□□ -1.22
SMC2-205ENST00000493955 GLDCP23378 1020 aa7.42□□□□□ -1.22
SMC2-205ENST00000493955 GRK6P43250 576 aa7.42□□□□□ -1.22
SMC2-205ENST00000493955 RPS16P62249 146 aaKnown RBP7.42□□□□□ -1.22
SMC2-205ENST00000493955 SLC13A2Q13183 592 aa7.42□□□□□ -1.22
SMC2-205ENST00000493955 NFYCQ13952 458 aa7.42□□□□□ -1.22
SMC2-205ENST00000493955 HABP2Q14520 560 aaPredicted RBP7.42□□□□□ -1.22
SMC2-205ENST00000493955 SSPNQ14714 243 aa7.42□□□□□ -1.22
SMC2-205ENST00000493955 STARD3Q14849 445 aa7.42□□□□□ -1.22
SMC2-205ENST00000493955 ARL13BQ3SXY8 428 aa7.42□□□□□ -1.22
SMC2-205ENST00000493955 ZNF568Q3ZCX4 644 aa7.42□□□□□ -1.22
SMC2-205ENST00000493955 PRR16Q569H4 304 aa7.42□□□□□ -1.22
SMC2-205ENST00000493955 ZNF354CQ86Y25 554 aa7.42□□□□□ -1.22
SMC2-205ENST00000493955 SYTL1Q8IYJ3 562 aa7.42□□□□□ -1.22
SMC2-205ENST00000493955 ATP11CQ8NB49 1132 aa7.42□□□□□ -1.22
SMC2-205ENST00000493955 GIMAP8Q8ND71 665 aaPredicted RBP7.42□□□□□ -1.22
SMC2-205ENST00000493955 ZSCAN18Q8TBC5 510 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms