RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 CMASQ8NFW8 434 aaPredicted RBP13.77□□□□□ -0.21
HSPG2-212ENST00000493940 RASSF8Q8NHQ8 419 aa13.77□□□□□ -0.21
HSPG2-212ENST00000493940 NECTIN4Q96NY8 510 aa13.77□□□□□ -0.21
HSPG2-212ENST00000493940 MYADMQ96S97 322 aa13.77□□□□□ -0.21
HSPG2-212ENST00000493940 TBC1D7Q9P0N9 293 aa13.77□□□□□ -0.21
HSPG2-212ENST00000493940 FBXW11Q9UKB1 542 aa13.77□□□□□ -0.21
HSPG2-212ENST00000493940 KRT18P05783 430 aaKnown RBP13.76□□□□□ -0.21
HSPG2-212ENST00000493940 ADRB2P07550 413 aa13.76□□□□□ -0.21
HSPG2-212ENST00000493940 ADSSP30520 456 aa13.76□□□□□ -0.21
HSPG2-212ENST00000493940 WNT7BP56706 349 aa13.76□□□□□ -0.21
HSPG2-212ENST00000493940 MRPL58Q14197 206 aaKnown RBP13.76□□□□□ -0.21
HSPG2-212ENST00000493940 E2F4Q16254 413 aa13.76□□□□□ -0.21
HSPG2-212ENST00000493940 AXDND1Q5T1B0 1012 aaPredicted RBP13.76□□□□□ -0.21
HSPG2-212ENST00000493940 CRELD2Q6UXH1 353 aaPredicted RBP13.76□□□□□ -0.21
HSPG2-212ENST00000493940 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.76□□□□□ -0.21
HSPG2-212ENST00000493940 C15orf39Q6ZRI6 1047 aa13.76□□□□□ -0.21
HSPG2-212ENST00000493940 MAP4K3Q8IVH8 894 aa13.76□□□□□ -0.21
HSPG2-212ENST00000493940 ZDHHC14Q8IZN3 488 aa13.76□□□□□ -0.21
HSPG2-212ENST00000493940 KRI1Q8N9T8 703 aaKnown RBP13.76□□□□□ -0.21
HSPG2-212ENST00000493940 GLIS3Q8NEA6 775 aa13.76□□□□□ -0.21
HSPG2-212ENST00000493940 RSAD2Q8WXG1 361 aa13.76□□□□□ -0.21
HSPG2-212ENST00000493940 HPS3Q969F9 1004 aa13.76□□□□□ -0.21
HSPG2-212ENST00000493940 BICD1Q96G01 975 aa13.76□□□□□ -0.21
HSPG2-212ENST00000493940 FAM84AQ96KN4 292 aa13.76□□□□□ -0.21
HSPG2-212ENST00000493940 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.76□□□□□ -0.21
HSPG2-212ENST00000493940 TOPORSQ9NS56 1045 aaPredicted RBP13.76□□□□□ -0.21
HSPG2-212ENST00000493940 MTRRQ9UBK8 725 aa13.76□□□□□ -0.21
HSPG2-212ENST00000493940 ZDHHC9Q9Y397 364 aa13.76□□□□□ -0.21
HSPG2-212ENST00000493940 DENND4CQ5VZ89 1909 aa13.76□□□□□ -0.21
HSPG2-212ENST00000493940 COL4A3Q01955 1670 aa13.75□□□□□ -0.21
HSPG2-212ENST00000493940 TMEM221A6NGB7 291 aa13.75□□□□□ -0.21
HSPG2-212ENST00000493940 M0R296 226 aa13.75□□□□□ -0.21
HSPG2-212ENST00000493940 NRG2O14511 850 aaPredicted RBP13.75□□□□□ -0.21
HSPG2-212ENST00000493940 SPTLC2O15270 562 aa13.75□□□□□ -0.21
HSPG2-212ENST00000493940 OGTO15294 1046 aa13.75□□□□□ -0.21
HSPG2-212ENST00000493940 ZMYND10O75800 440 aa13.75□□□□□ -0.21
HSPG2-212ENST00000493940 CLTAP09496 248 aa13.75□□□□□ -0.21
HSPG2-212ENST00000493940 ZSCAN22P10073 491 aaPredicted RBP13.75□□□□□ -0.21
HSPG2-212ENST00000493940 MATR3P43243 847 aaKnown RBP eCLIP13.75□□□□□ -0.21
HSPG2-212ENST00000493940 ACOT2P49753 483 aa13.75□□□□□ -0.21
HSPG2-212ENST00000493940 LIG4P49917 911 aa13.75□□□□□ -0.21
HSPG2-212ENST00000493940 RAB33AQ14088 237 aa13.75□□□□□ -0.21
HSPG2-212ENST00000493940 STK38Q15208 465 aa13.75□□□□□ -0.21
HSPG2-212ENST00000493940 IER5LQ5T953 404 aa13.75□□□□□ -0.21
HSPG2-212ENST00000493940 SMG7Q92540 1137 aaKnown RBP13.75□□□□□ -0.21
HSPG2-212ENST00000493940 UROC1Q96N76 676 aa13.75□□□□□ -0.21
HSPG2-212ENST00000493940 PRKD2Q9BZL6 878 aa13.75□□□□□ -0.21
HSPG2-212ENST00000493940 ST6GALNAC4Q9H4F1 302 aa13.75□□□□□ -0.21
HSPG2-212ENST00000493940 PLEKHA4Q9H4M7 779 aa13.75□□□□□ -0.21
HSPG2-212ENST00000493940 WDR6Q9NNW5 1121 aaKnown RBP13.75□□□□□ -0.21
HSPG2-212ENST00000493940 STK17AQ9UEE5 414 aa13.75□□□□□ -0.21
HSPG2-212ENST00000493940 KCNG1Q9UIX4 513 aa13.75□□□□□ -0.21
HSPG2-212ENST00000493940 CPSF3Q9UKF6 684 aaKnown RBP13.75□□□□□ -0.21
HSPG2-212ENST00000493940 USTQ9Y2C2 406 aa13.75□□□□□ -0.21
HSPG2-212ENST00000493940 NR2E1Q9Y466 385 aa13.75□□□□□ -0.21
HSPG2-212ENST00000493940 CDY1Q9Y6F8 540 aa13.75□□□□□ -0.21
HSPG2-212ENST00000493940 STYXL1Q9Y6J8 313 aa13.75□□□□□ -0.21
HSPG2-212ENST00000493940 DMDP11532 3685 aa13.75□□□□□ -0.21
HSPG2-212ENST00000493940 FRMD3A2A2Y4 597 aa13.74□□□□□ -0.21
HSPG2-212ENST00000493940 SPDYE4A6NLX3 237 aa13.74□□□□□ -0.21
HSPG2-212ENST00000493940 HNRNPDLO14979 420 aaKnown RBP13.74□□□□□ -0.21
HSPG2-212ENST00000493940 SEC24AO95486 1093 aa13.74□□□□□ -0.21
HSPG2-212ENST00000493940 F13A1P00488 732 aa13.74□□□□□ -0.21
HSPG2-212ENST00000493940 CASP1P29466 404 aa13.74□□□□□ -0.21
HSPG2-212ENST00000493940 VARS2Q5ST30 1063 aaKnown RBP13.74□□□□□ -0.21
HSPG2-212ENST00000493940 JADE1Q6IE81 842 aa13.74□□□□□ -0.21
HSPG2-212ENST00000493940 SV2BQ7L1I2 683 aa13.74□□□□□ -0.21
HSPG2-212ENST00000493940 APBB1IPQ7Z5R6 666 aaPredicted RBP13.74□□□□□ -0.21
HSPG2-212ENST00000493940 HSCBQ8IWL3 235 aa13.74□□□□□ -0.21
HSPG2-212ENST00000493940 HDAC7Q8WUI4 952 aa13.74□□□□□ -0.21
HSPG2-212ENST00000493940 RHOBTB2Q9BYZ6 727 aa13.74□□□□□ -0.21
HSPG2-212ENST00000493940 HCFC1R1Q9NWW0 138 aa13.74□□□□□ -0.21
HSPG2-212ENST00000493940 DAXXQ9UER7 740 aaPredicted RBP13.74□□□□□ -0.21
HSPG2-212ENST00000493940 CCDC39Q9UFE4 941 aa13.74□□□□□ -0.21
HSPG2-212ENST00000493940 TIMM13Q9Y5L4 95 aaPredicted RBP13.74□□□□□ -0.21
HSPG2-212ENST00000493940 MYO15AQ9UKN7 3530 aa13.74□□□□□ -0.21
HSPG2-212ENST00000493940 CLUHO75153 1309 aa13.73□□□□□ -0.21
HSPG2-212ENST00000493940 WDR27A2RRH5 827 aa13.73□□□□□ -0.21
HSPG2-212ENST00000493940 H0YCG3 227 aa13.73□□□□□ -0.21
HSPG2-212ENST00000493940 SPTLC1O15269 473 aa13.73□□□□□ -0.21
HSPG2-212ENST00000493940 CCL16O15467 120 aa13.73□□□□□ -0.21
HSPG2-212ENST00000493940 NARSO43776 548 aaKnown RBP13.73□□□□□ -0.21
HSPG2-212ENST00000493940 PPP6R2O75170 966 aa13.73□□□□□ -0.21
HSPG2-212ENST00000493940 TBCAO75347 108 aaKnown RBP13.73□□□□□ -0.21
HSPG2-212ENST00000493940 VNN2O95498 520 aa13.73□□□□□ -0.21
HSPG2-212ENST00000493940 C1RP00736 705 aa13.73□□□□□ -0.21
HSPG2-212ENST00000493940 C8AP07357 584 aa13.73□□□□□ -0.21
HSPG2-212ENST00000493940 NFICP08651 508 aa13.73□□□□□ -0.21
HSPG2-212ENST00000493940 LRPAP1P30533 357 aa13.73□□□□□ -0.21
HSPG2-212ENST00000493940 RPL9P32969 192 aaKnown RBP13.73□□□□□ -0.21
HSPG2-212ENST00000493940 HOXD13P35453 343 aa13.73□□□□□ -0.21
HSPG2-212ENST00000493940 STAT6P42226 847 aa13.73□□□□□ -0.21
HSPG2-212ENST00000493940 ROR1Q01973 937 aa13.73□□□□□ -0.21
HSPG2-212ENST00000493940 SIGLEC14Q08ET2 396 aa13.73□□□□□ -0.21
HSPG2-212ENST00000493940 ELAVL2Q12926 359 aaKnown RBP13.73□□□□□ -0.21
HSPG2-212ENST00000493940 CCDC149Q6ZUS6 474 aa13.73□□□□□ -0.21
HSPG2-212ENST00000493940 GRASPQ7Z6J2 395 aaPredicted RBP13.73□□□□□ -0.21
HSPG2-212ENST00000493940 TDRD5Q8NAT2 981 aaKnown RBP13.73□□□□□ -0.21
HSPG2-212ENST00000493940 PRSS33Q8NF86 280 aa13.73□□□□□ -0.21
HSPG2-212ENST00000493940 PBXIP1Q96AQ6 731 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 331.8 ms