RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 C3orf58Q8NDZ4 430 aa19.36■□□□□ 0.69
PDLIM7-208ENST00000493815 PARD3BQ8TEW8 1205 aa19.36■□□□□ 0.69
PDLIM7-208ENST00000493815 IGSF21Q96ID5 467 aa19.36■□□□□ 0.69
PDLIM7-208ENST00000493815 DACH1Q9UI36 760 aa19.36■□□□□ 0.69
PDLIM7-208ENST00000493815 DERAQ9Y315 318 aa19.36■□□□□ 0.69
PDLIM7-208ENST00000493815 RALGAPA2Q2PPJ7 1873 aa19.35■□□□□ 0.69
PDLIM7-208ENST00000493815 LRRIQ3A6PVS8 624 aaPredicted RBP19.35■□□□□ 0.69
PDLIM7-208ENST00000493815 PODXLO00592 558 aa19.35■□□□□ 0.69
PDLIM7-208ENST00000493815 B3GAT3O94766 335 aa19.35■□□□□ 0.69
PDLIM7-208ENST00000493815 TRIM49P0CI25 452 aa19.35■□□□□ 0.69
PDLIM7-208ENST00000493815 TRIM49CP0CI26 452 aa19.35■□□□□ 0.69
PDLIM7-208ENST00000493815 DNAJB1P25685 340 aa19.35■□□□□ 0.69
PDLIM7-208ENST00000493815 GPM6BQ13491 265 aa19.35■□□□□ 0.69
PDLIM7-208ENST00000493815 HSP90AA2PQ14568 343 aaPredicted RBP19.35■□□□□ 0.69
PDLIM7-208ENST00000493815 BEST2Q8NFU1 509 aa19.35■□□□□ 0.69
PDLIM7-208ENST00000493815 ZNF516Q92618 1163 aa19.35■□□□□ 0.69
PDLIM7-208ENST00000493815 SAMD11Q96NU1 681 aa19.35■□□□□ 0.69
PDLIM7-208ENST00000493815 C11orf84Q9BUA3 381 aaPredicted RBP19.35■□□□□ 0.69
PDLIM7-208ENST00000493815 PLVAPQ9BX97 442 aa19.35■□□□□ 0.69
PDLIM7-208ENST00000493815 DPP3Q9NY33 737 aa19.35■□□□□ 0.69
PDLIM7-208ENST00000493815 NLRC5Q86WI3 1866 aa19.35■□□□□ 0.69
PDLIM7-208ENST00000493815 TMEM265A0A087WTH1 108 aa19.34■□□□□ 0.69
PDLIM7-208ENST00000493815 H3BNC9 293 aa19.34■□□□□ 0.69
PDLIM7-208ENST00000493815 EPB41P11171 864 aaKnown RBP19.34■□□□□ 0.69
PDLIM7-208ENST00000493815 ERCC5P28715 1186 aaPredicted RBP19.34■□□□□ 0.69
PDLIM7-208ENST00000493815 DEFB123Q8N688 67 aa19.34■□□□□ 0.69
PDLIM7-208ENST00000493815 BORCS6Q96GS4 357 aa19.34■□□□□ 0.69
PDLIM7-208ENST00000493815 TMEM169Q96HH4 297 aa19.34■□□□□ 0.69
PDLIM7-208ENST00000493815 CGRRF1Q99675 332 aa19.34■□□□□ 0.69
PDLIM7-208ENST00000493815 COLEC11Q9BWP8 271 aa19.34■□□□□ 0.69
PDLIM7-208ENST00000493815 VN1R3Q9BXE9 311 aa19.34■□□□□ 0.69
PDLIM7-208ENST00000493815 INTS13Q9NVM9 706 aa19.34■□□□□ 0.69
PDLIM7-208ENST00000493815 MYO9BQ13459 2157 aa19.33■□□□□ 0.69
PDLIM7-208ENST00000493815 I3L4J1 428 aa19.33■□□□□ 0.69
PDLIM7-208ENST00000493815 XPOTO43592 962 aaKnown RBP19.33■□□□□ 0.69
PDLIM7-208ENST00000493815 LETM1O95202 739 aaPredicted RBP19.33■□□□□ 0.69
PDLIM7-208ENST00000493815 RB1P06400 928 aa19.33■□□□□ 0.69
PDLIM7-208ENST00000493815 TMEM191BP0C7N4 346 aa19.33■□□□□ 0.69
PDLIM7-208ENST00000493815 PPM1AP35813 382 aa19.33■□□□□ 0.69
PDLIM7-208ENST00000493815 VAMP7P51809 220 aa19.33■□□□□ 0.69
PDLIM7-208ENST00000493815 SURF1Q15526 300 aa19.33■□□□□ 0.69
PDLIM7-208ENST00000493815 ANO6Q4KMQ2 910 aa19.33■□□□□ 0.69
PDLIM7-208ENST00000493815 HSP90AA4PQ58FG1 418 aa19.33■□□□□ 0.69
PDLIM7-208ENST00000493815 C1orf220Q5T0J3 134 aa19.33■□□□□ 0.69
PDLIM7-208ENST00000493815 CD300LGQ6UXG3 332 aa19.33■□□□□ 0.69
PDLIM7-208ENST00000493815 WDR49Q8IV35 697 aa19.33■□□□□ 0.69
PDLIM7-208ENST00000493815 C1orf127Q8N9H9 656 aa19.33■□□□□ 0.69
PDLIM7-208ENST00000493815 SPPL3Q8TCT6 385 aa19.33■□□□□ 0.69
PDLIM7-208ENST00000493815 CEP63Q96MT8 703 aa19.33■□□□□ 0.69
PDLIM7-208ENST00000493815 FUCA2Q9BTY2 467 aa19.33■□□□□ 0.69
PDLIM7-208ENST00000493815 MMRN2Q9H8L6 949 aa19.33■□□□□ 0.69
PDLIM7-208ENST00000493815 EYSQ5T1H1 3165 aa19.33■□□□□ 0.68
PDLIM7-208ENST00000493815 PDCD11Q14690 1871 aaKnown RBP19.33■□□□□ 0.68
PDLIM7-208ENST00000493815 LPXNO60711 386 aa19.33■□□□□ 0.68
PDLIM7-208ENST00000493815 TADA2AO75478 443 aa19.33■□□□□ 0.68
PDLIM7-208ENST00000493815 ITGB3P05106 788 aa19.33■□□□□ 0.68
PDLIM7-208ENST00000493815 KRT13P13646 458 aa19.33■□□□□ 0.68
PDLIM7-208ENST00000493815 CYP3A5P20815 502 aa19.33■□□□□ 0.68
PDLIM7-208ENST00000493815 BFSP1Q12934 665 aa19.33■□□□□ 0.68
PDLIM7-208ENST00000493815 TPD52L1Q16890 204 aaPredicted RBP19.33■□□□□ 0.68
PDLIM7-208ENST00000493815 DUOXA2Q1HG44 320 aa19.33■□□□□ 0.68
PDLIM7-208ENST00000493815 C9orf57Q5W0N0 161 aa19.33■□□□□ 0.68
PDLIM7-208ENST00000493815 FOXR2Q6PJQ5 311 aa19.33■□□□□ 0.68
PDLIM7-208ENST00000493815 INTS8Q75QN2 995 aaKnown RBP19.33■□□□□ 0.68
PDLIM7-208ENST00000493815 TAS1R1Q7RTX1 841 aa19.33■□□□□ 0.68
PDLIM7-208ENST00000493815 FILIP1Q7Z7B0 1213 aa19.33■□□□□ 0.68
PDLIM7-208ENST00000493815 CREBRFQ8IUR6 639 aa19.33■□□□□ 0.68
PDLIM7-208ENST00000493815 CACTINQ8WUQ7 758 aaKnown RBP19.33■□□□□ 0.68
PDLIM7-208ENST00000493815 POF1BQ8WVV4 589 aa19.33■□□□□ 0.68
PDLIM7-208ENST00000493815 DDX27Q96GQ7 796 aaKnown RBP19.33■□□□□ 0.68
PDLIM7-208ENST00000493815 B3GALT6Q96L58 329 aa19.33■□□□□ 0.68
PDLIM7-208ENST00000493815 UROC1Q96N76 676 aa19.33■□□□□ 0.68
PDLIM7-208ENST00000493815 TSPAN18Q96SJ8 248 aa19.33■□□□□ 0.68
PDLIM7-208ENST00000493815 MKNK1Q9BUB5 465 aa19.33■□□□□ 0.68
PDLIM7-208ENST00000493815 GPR62Q9BZJ7 368 aa19.33■□□□□ 0.68
PDLIM7-208ENST00000493815 ADAM28Q9UKQ2 775 aa19.33■□□□□ 0.68
PDLIM7-208ENST00000493815 MAPK13O15264 365 aa19.32■□□□□ 0.68
PDLIM7-208ENST00000493815 SLC16A3O15427 465 aaKnown RBP19.32■□□□□ 0.68
PDLIM7-208ENST00000493815 KRT19P08727 400 aa19.32■□□□□ 0.68
PDLIM7-208ENST00000493815 CCDC192P0DO97 292 aa19.32■□□□□ 0.68
PDLIM7-208ENST00000493815 LRPAP1P30533 357 aa19.32■□□□□ 0.68
PDLIM7-208ENST00000493815 RPL9P32969 192 aaKnown RBP19.32■□□□□ 0.68
PDLIM7-208ENST00000493815 BRCC3P46736 316 aa19.32■□□□□ 0.68
PDLIM7-208ENST00000493815 PLCB3Q01970 1234 aa19.32■□□□□ 0.68
PDLIM7-208ENST00000493815 KRT17Q04695 432 aa19.32■□□□□ 0.68
PDLIM7-208ENST00000493815 CCDC40Q4G0X9 1142 aa19.32■□□□□ 0.68
PDLIM7-208ENST00000493815 DCAF17Q5H9S7 520 aaPredicted RBP19.32■□□□□ 0.68
PDLIM7-208ENST00000493815 DCLRE1AQ6PJP8 1040 aa19.32■□□□□ 0.68
PDLIM7-208ENST00000493815 NT5DC4Q86YG4 428 aa19.32■□□□□ 0.68
PDLIM7-208ENST00000493815 TMC2Q8TDI7 906 aa19.32■□□□□ 0.68
PDLIM7-208ENST00000493815 ANKRD36BP1Q96IX9 119 aa19.32■□□□□ 0.68
PDLIM7-208ENST00000493815 SIX4Q9UIU6 781 aa19.32■□□□□ 0.68
PDLIM7-208ENST00000493815 PCDHGC5Q9Y5F6 944 aa19.32■□□□□ 0.68
PDLIM7-208ENST00000493815 TNNC2P02585 160 aa19.31■□□□□ 0.68
PDLIM7-208ENST00000493815 POLR2BP30876 1174 aaKnown RBP19.31■□□□□ 0.68
PDLIM7-208ENST00000493815 PPP3CAQ08209 521 aa19.31■□□□□ 0.68
PDLIM7-208ENST00000493815 CAMK1Q14012 370 aa19.31■□□□□ 0.68
PDLIM7-208ENST00000493815 ADGRE1Q14246 886 aa19.31■□□□□ 0.68
PDLIM7-208ENST00000493815 GPR153Q6NV75 609 aa19.31■□□□□ 0.68
PDLIM7-208ENST00000493815 TRAPPC11Q7Z392 1133 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms