RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 WDR33Q9C0J8 1336 aaKnown RBP4.95□□□□□ -1.62
CD46-217ENST00000493796 A0A1B0GTW7 788 aa4.94□□□□□ -1.62
CD46-217ENST00000493796 TCRBV7S2A1N4TA0A589 114 aa4.94□□□□□ -1.62
CD46-217ENST00000493796 FOXN1O15353 648 aa4.94□□□□□ -1.62
CD46-217ENST00000493796 PRSS23O95084 383 aa4.94□□□□□ -1.62
CD46-217ENST00000493796 ZRANB2O95218 330 aaKnown RBP eCLIP4.94□□□□□ -1.623e-7■■□□□ 13.8
CD46-217ENST00000493796 ELANEP08246 267 aa4.94□□□□□ -1.62
CD46-217ENST00000493796 DDX6P26196 483 aaKnown RBP eCLIP4.94□□□□□ -1.62
CD46-217ENST00000493796 CREMQ03060 361 aa4.94□□□□□ -1.62
CD46-217ENST00000493796 OCA2Q04671 838 aa4.94□□□□□ -1.62
CD46-217ENST00000493796 ATP2B3Q16720 1220 aa4.94□□□□□ -1.62
CD46-217ENST00000493796 LAIR1Q6GTX8 287 aa4.94□□□□□ -1.62
CD46-217ENST00000493796 PCSK4Q6UW60 755 aa4.94□□□□□ -1.62
CD46-217ENST00000493796 VRK3Q8IV63 474 aa4.94□□□□□ -1.62
CD46-217ENST00000493796 MAPKAPK5Q8IW41 473 aa4.94□□□□□ -1.62
CD46-217ENST00000493796 IFI44Q8TCB0 444 aa4.94□□□□□ -1.62
CD46-217ENST00000493796 MRGPRX4Q96LA9 322 aa4.94□□□□□ -1.62
CD46-217ENST00000493796 TTPALQ9BTX7 342 aa4.94□□□□□ -1.62
CD46-217ENST00000493796 RNPEPQ9H4A4 650 aa4.94□□□□□ -1.62
CD46-217ENST00000493796 ANKFY1Q9P2R3 1169 aa4.94□□□□□ -1.62
CD46-217ENST00000493796 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.94□□□□□ -1.62
CD46-217ENST00000493796 A0A087X1B8 175 aa4.93□□□□□ -1.62
CD46-217ENST00000493796 CCDC78A2IDD5 438 aa4.93□□□□□ -1.62
CD46-217ENST00000493796 GRID2IPA4D2P6 1211 aa4.93□□□□□ -1.62
CD46-217ENST00000493796 UNC119BA6NIH7 251 aa4.93□□□□□ -1.62
CD46-217ENST00000493796 KIAA0391O15091 583 aaKnown RBP4.93□□□□□ -1.62
CD46-217ENST00000493796 CKBP12277 381 aa4.93□□□□□ -1.62
CD46-217ENST00000493796 ZEB1P37275 1124 aaPredicted RBP4.93□□□□□ -1.62
CD46-217ENST00000493796 RECQLP46063 649 aaPredicted RBP4.93□□□□□ -1.62
CD46-217ENST00000493796 SMARCA2P51531 1590 aa4.93□□□□□ -1.62
CD46-217ENST00000493796 GUCY1B3Q02153 619 aa4.93□□□□□ -1.62
CD46-217ENST00000493796 RESTQ13127 1097 aa4.93□□□□□ -1.62
CD46-217ENST00000493796 RAB39AQ14964 217 aa4.93□□□□□ -1.62
CD46-217ENST00000493796 UAP1L1Q3KQV9 507 aa4.93□□□□□ -1.62
CD46-217ENST00000493796 B3GNTL1Q67FW5 361 aaPredicted RBP4.93□□□□□ -1.62
CD46-217ENST00000493796 PPP4R3AQ6IN85 833 aa4.93□□□□□ -1.62
CD46-217ENST00000493796 ARMC6Q6NXE6 501 aa4.93□□□□□ -1.62
CD46-217ENST00000493796 TMEM132CQ8N3T6 1108 aa4.93□□□□□ -1.62
CD46-217ENST00000493796 FITM2Q8N6M3 262 aa4.93□□□□□ -1.62
CD46-217ENST00000493796 NLGN4YQ8NFZ3 816 aaPredicted RBP4.93□□□□□ -1.62
CD46-217ENST00000493796 KAT5Q92993 513 aa4.93□□□□□ -1.62
CD46-217ENST00000493796 CEP89Q96ST8 783 aa4.93□□□□□ -1.62
CD46-217ENST00000493796 ZSWIM1Q9BR11 485 aa4.93□□□□□ -1.62
CD46-217ENST00000493796 WDR11Q9BZH6 1224 aa4.93□□□□□ -1.62
CD46-217ENST00000493796 SERHL2Q9H4I8 314 aa4.93□□□□□ -1.62
CD46-217ENST00000493796 GSTO2Q9H4Y5 243 aa4.93□□□□□ -1.62
CD46-217ENST00000493796 PCDHB1Q9Y5F3 818 aa4.93□□□□□ -1.62
CD46-217ENST00000493796 CFAP20Q9Y6A4 193 aaKnown RBP4.93□□□□□ -1.62
CD46-217ENST00000493796 COL4A3Q01955 1670 aa4.92□□□□□ -1.62
CD46-217ENST00000493796 hCG_2014768A0A024R1R8 64 aa4.92□□□□□ -1.62
CD46-217ENST00000493796 CDHR4A6H8M9 788 aa4.92□□□□□ -1.62
CD46-217ENST00000493796 GRM6O15303 877 aa4.92□□□□□ -1.62
CD46-217ENST00000493796 B3GALT2O43825 422 aa4.92□□□□□ -1.62
CD46-217ENST00000493796 RAMP2O60895 175 aa4.92□□□□□ -1.62
CD46-217ENST00000493796 HAUS5O94927 633 aa4.92□□□□□ -1.62
CD46-217ENST00000493796 SNUPNO95149 360 aaKnown RBP4.92□□□□□ -1.62
CD46-217ENST00000493796 SPDEFO95238 335 aa4.92□□□□□ -1.62
CD46-217ENST00000493796 FGFR4P22455 802 aa4.92□□□□□ -1.62
CD46-217ENST00000493796 SLC6A4P31645 630 aa4.92□□□□□ -1.62
CD46-217ENST00000493796 MXRA7P84157 204 aa4.92□□□□□ -1.62
CD46-217ENST00000493796 PURAQ00577 322 aaKnown RBP4.92□□□□□ -1.62
CD46-217ENST00000493796 EXOSC10Q01780 885 aaKnown RBP4.92□□□□□ -1.62
CD46-217ENST00000493796 TLE1Q04724 770 aa4.92□□□□□ -1.62
CD46-217ENST00000493796 TP53BP2Q13625 1128 aa4.92□□□□□ -1.62
CD46-217ENST00000493796 PABPC1LQ4VXU2 614 aaKnown RBP4.92□□□□□ -1.62
CD46-217ENST00000493796 TMEM240Q5SV17 173 aa4.92□□□□□ -1.62
CD46-217ENST00000493796 CMTR2Q8IYT2 770 aaKnown RBP4.92□□□□□ -1.62
CD46-217ENST00000493796 MIER2Q8N344 545 aa4.92□□□□□ -1.62
CD46-217ENST00000493796 NSUN6Q8TEA1 469 aaKnown RBP4.92□□□□□ -1.62
CD46-217ENST00000493796 NUP133Q8WUM0 1156 aa4.92□□□□□ -1.62
CD46-217ENST00000493796 CLPTM1LQ96KA5 538 aa4.92□□□□□ -1.62
CD46-217ENST00000493796 DMRTA2Q96SC8 542 aa4.92□□□□□ -1.62
CD46-217ENST00000493796 SLITRK6Q9H5Y7 841 aa4.92□□□□□ -1.62
CD46-217ENST00000493796 TYW1Q9NV66 732 aaKnown RBP4.92□□□□□ -1.62
CD46-217ENST00000493796 CALCOCO1Q9P1Z2 691 aa4.92□□□□□ -1.62
CD46-217ENST00000493796 DMRT1Q9Y5R6 373 aa4.92□□□□□ -1.62
CD46-217ENST00000493796 CCDC88BA6NC98 1476 aa4.92□□□□□ -1.62
CD46-217ENST00000493796 AATKQ6ZMQ8 1374 aa4.91□□□□□ -1.62
CD46-217ENST00000493796 PIPSLA2A3N6 862 aa4.91□□□□□ -1.62
CD46-217ENST00000493796 CDKL5O76039 1030 aa4.91□□□□□ -1.62
CD46-217ENST00000493796 RPLP2P05387 115 aaKnown RBP4.91□□□□□ -1.62
CD46-217ENST00000493796 SBK3P0C264 359 aa4.91□□□□□ -1.62
CD46-217ENST00000493796 MTHFD1P11586 935 aaKnown RBP4.91□□□□□ -1.62
CD46-217ENST00000493796 ZNF280AP59817 542 aaPredicted RBP4.91□□□□□ -1.62
CD46-217ENST00000493796 ANAPC15P60006 121 aa4.91□□□□□ -1.62
CD46-217ENST00000493796 NOMO3P69849 1222 aa4.91□□□□□ -1.62
CD46-217ENST00000493796 HSD11B2P80365 405 aa4.91□□□□□ -1.62
CD46-217ENST00000493796 DSC2Q02487 901 aa4.91□□□□□ -1.62
CD46-217ENST00000493796 TAP1Q03518 808 aa4.91□□□□□ -1.62
CD46-217ENST00000493796 SLFN5Q08AF3 891 aa4.91□□□□□ -1.62
CD46-217ENST00000493796 FSTL1Q12841 308 aa4.91□□□□□ -1.62
CD46-217ENST00000493796 SPDYE7PQ495Y7 208 aa4.91□□□□□ -1.62
CD46-217ENST00000493796 NOMO2Q5JPE7 1267 aa4.91□□□□□ -1.62
CD46-217ENST00000493796 Q6YL49 198 aa4.91□□□□□ -1.62
CD46-217ENST00000493796 GADL1Q6ZQY3 521 aa4.91□□□□□ -1.62
CD46-217ENST00000493796 ZBTB46Q86UZ6 589 aa4.91□□□□□ -1.62
CD46-217ENST00000493796 TBC1D15Q8TC07 691 aa4.91□□□□□ -1.62
CD46-217ENST00000493796 CHMP4CQ96CF2 233 aa4.91□□□□□ -1.62
CD46-217ENST00000493796 MARS2Q96GW9 593 aaKnown RBP4.91□□□□□ -1.62
CD46-217ENST00000493796 AGAP2Q99490 1192 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms