RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 PODXLO00592 558 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 TRAPPC3O43617 180 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 TADA2AO75478 443 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 DDHD2O94830 711 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 TRIM49P0CI25 452 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 TRIM49CP0CI26 452 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 EEF1GP26641 437 aaKnown RBP8.21□□□□□ -1.1
VEGFA-214ENST00000493786 GTF2H1P32780 548 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 PBX2P40425 430 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 PNPLA4P41247 253 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 SLC11A1P49279 550 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 MXI1P50539 228 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 BCAR1P56945 870 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 ZNF445P59923 1031 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 RBP5P82980 135 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 KRT17Q04695 432 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 DSC1Q08554 894 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 MYO1EQ12965 1108 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 KCNJ12Q14500 433 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 BMS1Q14692 1282 aaKnown RBP8.21□□□□□ -1.1
VEGFA-214ENST00000493786 HSP90AA4PQ58FG1 418 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 LMBRD2Q68DH5 695 aaPredicted RBP8.21□□□□□ -1.1
VEGFA-214ENST00000493786 KCNT2Q6UVM3 1135 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 EFCAB13Q8IY85 973 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 COLGALT2Q8IYK4 626 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 CCDC150Q8NCX0 1101 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 GSTCDQ8NEC7 633 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 FBXO22Q8NEZ5 403 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 CLP1Q92989 425 aaKnown RBP8.21□□□□□ -1.1
VEGFA-214ENST00000493786 TMEM169Q96HH4 297 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 C11orf84Q9BUA3 381 aaPredicted RBP8.21□□□□□ -1.1
VEGFA-214ENST00000493786 PLVAPQ9BX97 442 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 IMPG2Q9BZV3 1241 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 CWH43Q9H720 699 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 GOLGA2P5Q9HBQ8 144 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 INTS13Q9NVM9 706 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 SPG21Q9NZD8 308 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 DNAJB4Q9UDY4 337 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 TUBGCP4Q9UGJ1 667 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 PUF60Q9UHX1 559 aaKnown RBP8.21□□□□□ -1.1
VEGFA-214ENST00000493786 MTUS1Q9ULD2 1270 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 YBX2Q9Y2T7 364 aaKnown RBP8.21□□□□□ -1.1
VEGFA-214ENST00000493786 COL4A6Q14031 1691 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 LAMA2P24043 3122 aaKnown RBP8.2□□□□□ -1.1
VEGFA-214ENST00000493786 TMEM265A0A087WTH1 108 aa8.2□□□□□ -1.1
VEGFA-214ENST00000493786 ARHGEF37A1IGU5 675 aa8.2□□□□□ -1.1
VEGFA-214ENST00000493786 NRP1O14786 923 aa8.2□□□□□ -1.1
VEGFA-214ENST00000493786 MEFVO15553 781 aaPredicted RBP8.2□□□□□ -1.1
VEGFA-214ENST00000493786 B3GAT3O94766 335 aa8.2□□□□□ -1.1
VEGFA-214ENST00000493786 AFPP02771 609 aaKnown RBP8.2□□□□□ -1.1
VEGFA-214ENST00000493786 ITGB3P05106 788 aa8.2□□□□□ -1.1
VEGFA-214ENST00000493786 RB1P06400 928 aa8.2□□□□□ -1.1
VEGFA-214ENST00000493786 GALTP07902 379 aa8.2□□□□□ -1.1
VEGFA-214ENST00000493786 PRKCSHP14314 528 aaPredicted RBP8.2□□□□□ -1.1
VEGFA-214ENST00000493786 PAX3P23760 479 aa8.2□□□□□ -1.1
VEGFA-214ENST00000493786 LRPAP1P30533 357 aa8.2□□□□□ -1.1
VEGFA-214ENST00000493786 POLR2BP30876 1174 aaKnown RBP8.2□□□□□ -1.1
VEGFA-214ENST00000493786 BMPR1AP36894 532 aa8.2□□□□□ -1.1
VEGFA-214ENST00000493786 PBX3P40426 434 aa8.2□□□□□ -1.1
VEGFA-214ENST00000493786 PIK3CAP42336 1068 aa8.2□□□□□ -1.1
VEGFA-214ENST00000493786 GCLMP48507 274 aa8.2□□□□□ -1.1
VEGFA-214ENST00000493786 CLCNKBP51801 687 aa8.2□□□□□ -1.1
VEGFA-214ENST00000493786 MARSP56192 900 aaKnown RBP8.2□□□□□ -1.1
VEGFA-214ENST00000493786 WNT7BP56706 349 aa8.2□□□□□ -1.1
VEGFA-214ENST00000493786 DLG4P78352 724 aa8.2□□□□□ -1.1
VEGFA-214ENST00000493786 MYL7Q01449 175 aa8.2□□□□□ -1.1
VEGFA-214ENST00000493786 TAP1Q03518 808 aa8.2□□□□□ -1.1
VEGFA-214ENST00000493786 SOX4Q06945 474 aaPredicted RBP8.2□□□□□ -1.1
VEGFA-214ENST00000493786 ELAVL2Q12926 359 aaKnown RBP8.2□□□□□ -1.1
VEGFA-214ENST00000493786 ZBTB6Q15916 424 aa8.2□□□□□ -1.1
VEGFA-214ENST00000493786 SV2CQ496J9 727 aa8.2□□□□□ -1.1
VEGFA-214ENST00000493786 TCP11X2Q5H9J9 407 aa8.2□□□□□ -1.1
VEGFA-214ENST00000493786 ZNF697Q5TEC3 545 aa8.2□□□□□ -1.1
VEGFA-214ENST00000493786 KRT39Q6A163 491 aa8.2□□□□□ -1.1
VEGFA-214ENST00000493786 DCLRE1AQ6PJP8 1040 aa8.2□□□□□ -1.1
VEGFA-214ENST00000493786 TRAPPC11Q7Z392 1133 aa8.2□□□□□ -1.1
VEGFA-214ENST00000493786 C1orf127Q8N9H9 656 aa8.2□□□□□ -1.1
VEGFA-214ENST00000493786 OR5B17Q8NGF7 314 aa8.2□□□□□ -1.1
VEGFA-214ENST00000493786 POP1Q99575 1024 aaKnown RBP8.2□□□□□ -1.1
VEGFA-214ENST00000493786 TUBGCP2Q9BSJ2 902 aa8.2□□□□□ -1.1
VEGFA-214ENST00000493786 CXCL16Q9H2A7 254 aa8.2□□□□□ -1.1
VEGFA-214ENST00000493786 CBX8Q9HC52 389 aa8.2□□□□□ -1.1
VEGFA-214ENST00000493786 TMEM8AQ9HCN3 771 aa8.2□□□□□ -1.1
VEGFA-214ENST00000493786 SAMSN1Q9NSI8 373 aaKnown RBP8.2□□□□□ -1.1
VEGFA-214ENST00000493786 FANCLQ9NW38 375 aa8.2□□□□□ -1.1
VEGFA-214ENST00000493786 HCSTQ9UBK5 93 aa8.2□□□□□ -1.1
VEGFA-214ENST00000493786 ADAM28Q9UKQ2 775 aa8.2□□□□□ -1.1
VEGFA-214ENST00000493786 AGAP1Q9UPQ3 857 aa8.2□□□□□ -1.1
VEGFA-214ENST00000493786 SF3B1O75533 1304 aaKnown RBP eCLIP8.2□□□□□ -1.16e-7■■■■■ 31.1
VEGFA-214ENST00000493786 NT5C1B-RDH14C9J2C7 533 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 C5orf67F2Z3F1 127 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 TMEM189-UBE2V1I3L0A0 370 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 LPXNO60711 386 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 FGF18O76093 207 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 KIF4AO95239 1232 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 P4HA1P13674 534 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 CA8P35219 290 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 TAF6P49848 677 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 GUCY2FP51841 1108 aa8.19□□□□□ -1.1
VEGFA-214ENST00000493786 ERVK-21P61565 698 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms