RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 KIAA0391O15091 583 aaKnown RBP5.87□□□□□ -1.47
SMC4-223ENST00000493695 YY2O15391 372 aa5.87□□□□□ -1.47
SMC4-223ENST00000493695 TEX33O43247 280 aa5.87□□□□□ -1.47
SMC4-223ENST00000493695 C1QL1O75973 258 aa5.87□□□□□ -1.47
SMC4-223ENST00000493695 MTHFD2P13995 350 aa5.87□□□□□ -1.47
SMC4-223ENST00000493695 GSPT1P15170 499 aaKnown RBP5.87□□□□□ -1.47
SMC4-223ENST00000493695 FPR1P21462 350 aa5.87□□□□□ -1.47
SMC4-223ENST00000493695 GPD1P21695 349 aa5.87□□□□□ -1.47
SMC4-223ENST00000493695 MRPS9P82933 396 aaKnown RBP5.87□□□□□ -1.47
SMC4-223ENST00000493695 CREMQ03060 361 aa5.87□□□□□ -1.47
SMC4-223ENST00000493695 STRN3Q13033 797 aa5.87□□□□□ -1.47
SMC4-223ENST00000493695 TOR2AQ5JU69 321 aa5.87□□□□□ -1.47
SMC4-223ENST00000493695 TSTD2Q5T7W7 516 aa5.87□□□□□ -1.47
SMC4-223ENST00000493695 KAZNQ674X7 775 aa5.87□□□□□ -1.47
SMC4-223ENST00000493695 GRASPQ7Z6J2 395 aaPredicted RBP5.87□□□□□ -1.47
SMC4-223ENST00000493695 FITM2Q8N6M3 262 aa5.87□□□□□ -1.47
SMC4-223ENST00000493695 TBC1D15Q8TC07 691 aa5.87□□□□□ -1.47
SMC4-223ENST00000493695 SCARB1Q8WTV0 552 aa5.87□□□□□ -1.47
SMC4-223ENST00000493695 TSPEARQ8WU66 669 aa5.87□□□□□ -1.47
SMC4-223ENST00000493695 UBXN4Q92575 508 aa5.87□□□□□ -1.47
SMC4-223ENST00000493695 FBXL20Q96IG2 436 aa5.87□□□□□ -1.47
SMC4-223ENST00000493695 DRC1Q96MC2 740 aa5.87□□□□□ -1.47
SMC4-223ENST00000493695 PNKPQ96T60 521 aa5.87□□□□□ -1.47
SMC4-223ENST00000493695 GSTO2Q9H4Y5 243 aa5.87□□□□□ -1.47
SMC4-223ENST00000493695 MRPL42Q9Y6G3 142 aaKnown RBP5.87□□□□□ -1.47
SMC4-223ENST00000493695 TCRBV7S2A1N4TA0A589 114 aa5.86□□□□□ -1.47
SMC4-223ENST00000493695 CDHR4A6H8M9 788 aa5.86□□□□□ -1.47
SMC4-223ENST00000493695 KRTAP29-1A8MX34 341 aaPredicted RBP5.86□□□□□ -1.47
SMC4-223ENST00000493695 ITGB6P18564 788 aa5.86□□□□□ -1.47
SMC4-223ENST00000493695 NOMO3P69849 1222 aa5.86□□□□□ -1.47
SMC4-223ENST00000493695 NOMO2Q5JPE7 1267 aa5.86□□□□□ -1.47
SMC4-223ENST00000493695 ZNF788Q6ZQV5 615 aa5.86□□□□□ -1.47
SMC4-223ENST00000493695 MICALCLQ6ZW33 695 aa5.86□□□□□ -1.47
SMC4-223ENST00000493695 DDX46Q7L014 1031 aaKnown RBP5.86□□□□□ -1.47
SMC4-223ENST00000493695 CMIPQ8IY22 773 aa5.86□□□□□ -1.47
SMC4-223ENST00000493695 DDB2Q92466 427 aa5.86□□□□□ -1.47
SMC4-223ENST00000493695 UROC1Q96N76 676 aa5.86□□□□□ -1.47
SMC4-223ENST00000493695 WDR91A4D1P6 747 aa5.85□□□□□ -1.47
SMC4-223ENST00000493695 ENDOD1O94919 500 aa5.85□□□□□ -1.47
SMC4-223ENST00000493695 SRSF7Q16629 238 aaKnown RBP eCLIP5.85□□□□□ -1.47
SMC4-223ENST00000493695 MUM1Q2TAK8 710 aa5.85□□□□□ -1.47
SMC4-223ENST00000493695 SH2D3CQ8N5H7 860 aa5.85□□□□□ -1.47
SMC4-223ENST00000493695 TOR1AIP2Q8NFQ8 470 aa5.85□□□□□ -1.47
SMC4-223ENST00000493695 TFAP2BQ92481 460 aa5.85□□□□□ -1.47
SMC4-223ENST00000493695 FUBP1Q96AE4 644 aaKnown RBP5.85□□□□□ -1.47
SMC4-223ENST00000493695 TMEM125Q96AQ2 219 aa5.85□□□□□ -1.47
SMC4-223ENST00000493695 KMT5AQ9NQR1 393 aa5.85□□□□□ -1.47
SMC4-223ENST00000493695 SLC23A1Q9UHI7 598 aa5.85□□□□□ -1.47
SMC4-223ENST00000493695 DNM3Q9UQ16 869 aa5.85□□□□□ -1.47
SMC4-223ENST00000493695 MANSC4A6NHS7 340 aaPredicted RBP5.84□□□□□ -1.47
SMC4-223ENST00000493695 PROP1O75360 226 aa5.84□□□□□ -1.47
SMC4-223ENST00000493695 GPR32O75388 356 aa5.84□□□□□ -1.47
SMC4-223ENST00000493695 BPIP17213 487 aa5.84□□□□□ -1.47
SMC4-223ENST00000493695 FOLR3P41439 243 aa5.84□□□□□ -1.47
SMC4-223ENST00000493695 OTUD7BQ6GQQ9 843 aa5.84□□□□□ -1.47
SMC4-223ENST00000493695 LNX2Q8N448 690 aa5.84□□□□□ -1.47
SMC4-223ENST00000493695 UBR7Q8N806 425 aa5.84□□□□□ -1.47
SMC4-223ENST00000493695 ZNF778Q96MU6 729 aa5.84□□□□□ -1.47
SMC4-223ENST00000493695 HSFX1Q9UBD0 423 aa5.84□□□□□ -1.47
SMC4-223ENST00000493695 ARPP21Q9UBL0 812 aaPredicted RBP5.84□□□□□ -1.47
SMC4-223ENST00000493695 MAPRE3Q9UPY8 281 aa5.84□□□□□ -1.47
SMC4-223ENST00000493695 ZEB2O60315 1214 aa5.83□□□□□ -1.48
SMC4-223ENST00000493695 ZFPL1O95159 310 aa5.83□□□□□ -1.48
SMC4-223ENST00000493695 PCSK1P29120 753 aa5.83□□□□□ -1.48
SMC4-223ENST00000493695 GUCY1A2P33402 732 aa5.83□□□□□ -1.48
SMC4-223ENST00000493695 SRSF2Q01130 221 aaKnown RBP5.83□□□□□ -1.48
SMC4-223ENST00000493695 DHCR24Q15392 516 aa5.83□□□□□ -1.48
SMC4-223ENST00000493695 ATP2B3Q16720 1220 aa5.83□□□□□ -1.48
SMC4-223ENST00000493695 PREPLQ4J6C6 727 aaPredicted RBP5.83□□□□□ -1.48
SMC4-223ENST00000493695 AMIGO2Q86SJ2 522 aa5.83□□□□□ -1.48
SMC4-223ENST00000493695 PEG10Q86TG7 708 aaKnown RBP5.83□□□□□ -1.48
SMC4-223ENST00000493695 NUP133Q8WUM0 1156 aa5.83□□□□□ -1.48
SMC4-223ENST00000493695 MED15Q96RN5 788 aa5.83□□□□□ -1.48
SMC4-223ENST00000493695 DNAJC28Q9NX36 388 aa5.83□□□□□ -1.48
SMC4-223ENST00000493695 APOBEC2Q9Y235 224 aaKnown RBP5.83□□□□□ -1.48
SMC4-223ENST00000493695 PCDHGA2Q9Y5H1 932 aa5.83□□□□□ -1.48
SMC4-223ENST00000493695 A0A087X0B3 334 aa5.82□□□□□ -1.48
SMC4-223ENST00000493695 CCDC151A5D8V7 595 aa5.82□□□□□ -1.48
SMC4-223ENST00000493695 FPGSQ05932 587 aa5.82□□□□□ -1.48
SMC4-223ENST00000493695 MALLQ13021 153 aa5.82□□□□□ -1.48
SMC4-223ENST00000493695 TAF7LQ5H9L4 462 aa5.82□□□□□ -1.48
SMC4-223ENST00000493695 TSHZ1Q6ZSZ6 1077 aa5.82□□□□□ -1.48
SMC4-223ENST00000493695 SEM1Q6ZVN7 128 aa5.82□□□□□ -1.48
SMC4-223ENST00000493695 ZNF366Q8N895 744 aa5.82□□□□□ -1.48
SMC4-223ENST00000493695 CASKIN2Q8WXE0 1202 aa5.82□□□□□ -1.48
SMC4-223ENST00000493695 ST3GAL5Q9UNP4 418 aa5.82□□□□□ -1.48
SMC4-223ENST00000493695 CDYLQ9Y232 598 aa5.82□□□□□ -1.48
SMC4-223ENST00000493695 CHRM2P08172 466 aa5.81□□□□□ -1.48
SMC4-223ENST00000493695 OSMP13725 252 aa5.81□□□□□ -1.48
SMC4-223ENST00000493695 MAPK10P53779 464 aa5.81□□□□□ -1.48
SMC4-223ENST00000493695 PPP3CAQ08209 521 aa5.81□□□□□ -1.48
SMC4-223ENST00000493695 EZH2Q15910 746 aaKnown RBP5.81□□□□□ -1.48
SMC4-223ENST00000493695 FAM153CQ494X1 144 aa5.81□□□□□ -1.48
SMC4-223ENST00000493695 PTF1AQ7RTS3 328 aa5.81□□□□□ -1.48
SMC4-223ENST00000493695 FCER1AP12319 257 aa5.8□□□□□ -1.48
SMC4-223ENST00000493695 DDCP20711 480 aa5.8□□□□□ -1.48
SMC4-223ENST00000493695 MCAMP43121 646 aa5.8□□□□□ -1.48
SMC4-223ENST00000493695 PROK1P58294 105 aa5.8□□□□□ -1.48
SMC4-223ENST00000493695 SLC30A5Q8TAD4 765 aa5.8□□□□□ -1.48
SMC4-223ENST00000493695 LMBR1Q8WVP7 490 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms