RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 UBR7Q8N806 425 aa11.55□□□□□ -0.56
PHACTR4-204ENST00000493669 KATNBL1Q9H079 304 aa11.55□□□□□ -0.56
PHACTR4-204ENST00000493669 GBA2Q9HCG7 927 aaPredicted RBP11.55□□□□□ -0.56
PHACTR4-204ENST00000493669 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.55□□□□□ -0.56
PHACTR4-204ENST00000493669 ZNF236Q9UL36 1845 aa11.55□□□□□ -0.56
PHACTR4-204ENST00000493669 POLR3GO15318 223 aaPredicted RBP11.55□□□□□ -0.56
PHACTR4-204ENST00000493669 B4GALT4O60513 344 aa11.55□□□□□ -0.56
PHACTR4-204ENST00000493669 HARSP12081 509 aaKnown RBP11.55□□□□□ -0.56
PHACTR4-204ENST00000493669 COMTP21964 271 aa11.55□□□□□ -0.56
PHACTR4-204ENST00000493669 NSFP46459 744 aaKnown RBP11.55□□□□□ -0.56
PHACTR4-204ENST00000493669 MBTD1Q05BQ5 628 aa11.55□□□□□ -0.56
PHACTR4-204ENST00000493669 IRF5Q13568 498 aa11.55□□□□□ -0.56
PHACTR4-204ENST00000493669 GRB14Q14449 540 aa11.55□□□□□ -0.56
PHACTR4-204ENST00000493669 KYAT1Q16773 422 aa11.55□□□□□ -0.56
PHACTR4-204ENST00000493669 PTPROQ16827 1216 aa11.55□□□□□ -0.56
PHACTR4-204ENST00000493669 SGSM1Q2NKQ1 1148 aa11.55□□□□□ -0.56
PHACTR4-204ENST00000493669 ZBTB33Q86T24 672 aa11.55□□□□□ -0.56
PHACTR4-204ENST00000493669 PCDHB4Q9Y5E5 795 aa11.55□□□□□ -0.56
PHACTR4-204ENST00000493669 GOLGA6BA6NDN3 693 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 TTLL13PA6NNM8 815 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 PPFIA4O75335 1185 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 HOXD8P13378 290 aaPredicted RBP11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 SLC1A1P43005 524 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 PEX5P50542 639 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 ZNF132P52740 706 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 TNFAIP2Q03169 654 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 MESDQ14696 234 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 FAM110CQ1W6H9 321 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 ZNF568Q3ZCX4 644 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 SEL1L2Q5TEA6 688 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 SPOPLQ6IQ16 392 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 RBBP8NLQ8NC74 664 aaPredicted RBP11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 CASKIN2Q8WXE0 1202 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 SEC14L1Q92503 715 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 ALG3Q92685 438 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 NLRP4Q96MN2 994 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 PLVAPQ9BX97 442 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 AP1M1Q9BXS5 423 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 ZNF408Q9H9D4 720 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 PSD3Q9NYI0 1048 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 NUB1Q9Y5A7 615 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 INO80B-WBP1J3KQ70 363 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 TMOD1P28289 359 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 GNA15P30679 374 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 MAPK4P31152 587 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 TNFSF9P41273 254 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 CARSP49589 748 aaKnown RBP11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 LIN9Q5TKA1 542 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 MAP1SQ66K74 1059 aaPredicted RBP11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 EFCAB13Q8IY85 973 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 EXOC4Q96A65 974 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 RUNDC3BQ96NL0 473 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 INO80BQ9C086 356 aaPredicted RBP11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 NIF3L1Q9GZT8 377 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 RNPEPQ9H4A4 650 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 PRDM10Q9NQV6 1147 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 PCDHA3Q9Y5H8 950 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 FAM187AA6NFU0 413 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 SPOPO43791 374 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 TNNC2P02585 160 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 HOXC6P09630 235 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 INSRRP14616 1297 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 CLCN3P51790 818 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 YWHAEP62258 255 aaKnown RBP11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 MRPS25P82663 173 aaKnown RBP11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 DHX34Q14147 1143 aaKnown RBP11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 TMEM270Q6UE05 265 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 MON1BQ7L1V2 547 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 GPR142Q7Z601 462 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 PHF13Q86YI8 300 aaPredicted RBP11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 GOLGA6L1Q8N7Z2 621 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 C2orf69Q8N8R5 385 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 TRAPPC12Q8WVT3 735 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 RAB17Q9H0T7 212 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 LCMT1Q9UIC8 334 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 NFU1Q9UMS0 254 aa11.54□□□□□ -0.56
PHACTR4-204ENST00000493669 ATMINO43313 823 aaPredicted RBP11.53□□□□□ -0.56
PHACTR4-204ENST00000493669 MCF2P10911 925 aa11.53□□□□□ -0.56
PHACTR4-204ENST00000493669 SPRYD7Q5W111 196 aa11.53□□□□□ -0.56
PHACTR4-204ENST00000493669 ANKRD36BP1Q96IX9 119 aa11.53□□□□□ -0.56
PHACTR4-204ENST00000493669 FAM84AQ96KN4 292 aa11.53□□□□□ -0.56
PHACTR4-204ENST00000493669 DDX47Q9H0S4 455 aaKnown RBP11.53□□□□□ -0.56
PHACTR4-204ENST00000493669 FAM114A2Q9NRY5 505 aa11.53□□□□□ -0.56
PHACTR4-204ENST00000493669 SLC5A4Q9NY91 659 aa11.53□□□□□ -0.56
PHACTR4-204ENST00000493669 OPA1O60313 960 aa11.53□□□□□ -0.56
PHACTR4-204ENST00000493669 LSM8O95777 96 aaKnown RBP11.53□□□□□ -0.56
PHACTR4-204ENST00000493669 SNAI1O95863 264 aaPredicted RBP11.53□□□□□ -0.56
PHACTR4-204ENST00000493669 SYF2O95926 243 aaKnown RBP11.53□□□□□ -0.56
PHACTR4-204ENST00000493669 TMEM191BP0C7N4 346 aa11.53□□□□□ -0.56
PHACTR4-204ENST00000493669 ITGA4P13612 1032 aa11.53□□□□□ -0.56
PHACTR4-204ENST00000493669 NOMO3P69849 1222 aa11.53□□□□□ -0.56
PHACTR4-204ENST00000493669 C1QBPQ07021 282 aaKnown RBP11.53□□□□□ -0.56
PHACTR4-204ENST00000493669 TRPC3Q13507 836 aa11.53□□□□□ -0.56
PHACTR4-204ENST00000493669 DUSP28Q4G0W2 176 aa11.53□□□□□ -0.56
PHACTR4-204ENST00000493669 SEZ6Q53EL9 994 aa11.53□□□□□ -0.56
PHACTR4-204ENST00000493669 PLEKHH3Q7Z736 793 aa11.53□□□□□ -0.56
PHACTR4-204ENST00000493669 IFT81Q8WYA0 676 aa11.53□□□□□ -0.56
PHACTR4-204ENST00000493669 PKNOX2Q96KN3 472 aa11.53□□□□□ -0.56
PHACTR4-204ENST00000493669 MTMR12Q9C0I1 747 aa11.53□□□□□ -0.56
PHACTR4-204ENST00000493669 CDT1Q9H211 546 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms