RNA–Protein interactions for RNA: ENST00000493653.1

PDS5B-208, Transcript of PDS5 cohesin associated factor B, humanhuman

TSL 1 (best)

Gene PDS5B, Length 972 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5B-208ENST00000493653 NUMBLQ9Y6R0 609 aa12.92□□□□□ -0.34
PDS5B-208ENST00000493653 CITO14578 2027 aa12.91□□□□□ -0.34
PDS5B-208ENST00000493653 SMIM28A0A1B0GU29 152 aa12.91□□□□□ -0.34
PDS5B-208ENST00000493653 SFI1A8K8P3 1242 aa12.91□□□□□ -0.34
PDS5B-208ENST00000493653 PODXLO00592 558 aa12.91□□□□□ -0.34
PDS5B-208ENST00000493653 ABLIM1O14639 778 aa12.91□□□□□ -0.34
PDS5B-208ENST00000493653 XYLBO75191 536 aa12.91□□□□□ -0.34
PDS5B-208ENST00000493653 HNRNPA1P09651 372 aaKnown RBP eCLIP12.91□□□□□ -0.34
PDS5B-208ENST00000493653 MCF2P10911 925 aa12.91□□□□□ -0.34
PDS5B-208ENST00000493653 SRFP11831 508 aa12.91□□□□□ -0.34
PDS5B-208ENST00000493653 LAMP2P13473 410 aa12.91□□□□□ -0.34
PDS5B-208ENST00000493653 NPR3P17342 541 aa12.91□□□□□ -0.34
PDS5B-208ENST00000493653 PROZP22891 400 aa12.91□□□□□ -0.34
PDS5B-208ENST00000493653 GUCY2CP25092 1073 aa12.91□□□□□ -0.34
PDS5B-208ENST00000493653 HOXA9P31269 272 aa12.91□□□□□ -0.34
PDS5B-208ENST00000493653 OR1D2P34982 312 aa12.91□□□□□ -0.34
PDS5B-208ENST00000493653 CLCN5P51795 746 aa12.91□□□□□ -0.34
PDS5B-208ENST00000493653 STRN3Q13033 797 aa12.91□□□□□ -0.34
PDS5B-208ENST00000493653 AXDND1Q5T1B0 1012 aaPredicted RBP12.91□□□□□ -0.34
PDS5B-208ENST00000493653 PNMA5Q96PV4 448 aa12.91□□□□□ -0.34
PDS5B-208ENST00000493653 TCHPQ9BT92 498 aa12.91□□□□□ -0.34
PDS5B-208ENST00000493653 TIPINQ9BVW5 301 aa12.91□□□□□ -0.34
PDS5B-208ENST00000493653 UPF2Q9HAU5 1272 aaKnown RBP12.91□□□□□ -0.34
PDS5B-208ENST00000493653 PTPRHQ9HD43 1115 aa12.91□□□□□ -0.34
PDS5B-208ENST00000493653 SLC38A7Q9NVC3 462 aa12.91□□□□□ -0.34
PDS5B-208ENST00000493653 PDCD11Q14690 1871 aaKnown RBP12.91□□□□□ -0.34
PDS5B-208ENST00000493653 MYH11P35749 1972 aa12.9□□□□□ -0.34
PDS5B-208ENST00000493653 MYH15Q9Y2K3 1946 aa12.9□□□□□ -0.34
PDS5B-208ENST00000493653 KRBA1A5PL33 1030 aa12.9□□□□□ -0.34
PDS5B-208ENST00000493653 TRAPPC3O43617 180 aa12.9□□□□□ -0.34
PDS5B-208ENST00000493653 PI15O43692 258 aa12.9□□□□□ -0.34
PDS5B-208ENST00000493653 PLS3P13797 630 aa12.9□□□□□ -0.34
PDS5B-208ENST00000493653 RAB33AQ14088 237 aa12.9□□□□□ -0.34
PDS5B-208ENST00000493653 TMEM119Q4V9L6 283 aa12.9□□□□□ -0.34
PDS5B-208ENST00000493653 HYIQ5T013 277 aa12.9□□□□□ -0.34
PDS5B-208ENST00000493653 DCLRE1AQ6PJP8 1040 aa12.9□□□□□ -0.34
PDS5B-208ENST00000493653 CD300LGQ6UXG3 332 aa12.9□□□□□ -0.34
PDS5B-208ENST00000493653 RSPO2Q6UXX9 243 aaPredicted RBP12.9□□□□□ -0.34
PDS5B-208ENST00000493653 ANKS3Q6ZW76 656 aa12.9□□□□□ -0.34
PDS5B-208ENST00000493653 CCDC105Q8IYK2 499 aa12.9□□□□□ -0.34
PDS5B-208ENST00000493653 TMEM161BQ8NDZ6 487 aa12.9□□□□□ -0.34
PDS5B-208ENST00000493653 GPR152Q8TDT2 470 aa12.9□□□□□ -0.34
PDS5B-208ENST00000493653 C18orf25Q96B23 403 aaPredicted RBP12.9□□□□□ -0.34
PDS5B-208ENST00000493653 BICD1Q96G01 975 aa12.9□□□□□ -0.34
PDS5B-208ENST00000493653 ZMAT2Q96NC0 199 aaKnown RBP12.9□□□□□ -0.34
PDS5B-208ENST00000493653 ACAP3Q96P50 834 aa12.9□□□□□ -0.34
PDS5B-208ENST00000493653 TBC1D17Q9HA65 648 aa12.9□□□□□ -0.34
PDS5B-208ENST00000493653 C17orf75Q9HAS0 396 aa12.9□□□□□ -0.34
PDS5B-208ENST00000493653 ARHGEF3Q9NR81 526 aa12.9□□□□□ -0.34
PDS5B-208ENST00000493653 CNTN3Q9P232 1028 aa12.9□□□□□ -0.34
PDS5B-208ENST00000493653 RBM19Q9Y4C8 960 aaKnown RBP12.9□□□□□ -0.34
PDS5B-208ENST00000493653 DOCK6Q96HP0 2047 aa12.89□□□□□ -0.35
PDS5B-208ENST00000493653 NPHP3-ACAD11A0A0J9YXS1 232 aa12.89□□□□□ -0.35
PDS5B-208ENST00000493653 ANHXE9PGG2 379 aa12.89□□□□□ -0.35
PDS5B-208ENST00000493653 MEFVO15553 781 aaPredicted RBP12.89□□□□□ -0.35
PDS5B-208ENST00000493653 TOM1L1O75674 476 aa12.89□□□□□ -0.35
PDS5B-208ENST00000493653 PLA2G4BP0C869 781 aa12.89□□□□□ -0.35
PDS5B-208ENST00000493653 MAPTP10636 758 aaKnown RBP12.89□□□□□ -0.35
PDS5B-208ENST00000493653 MATR3P43243 847 aaKnown RBP eCLIP12.89□□□□□ -0.35
PDS5B-208ENST00000493653 SMTNP53814 917 aa12.89□□□□□ -0.35
PDS5B-208ENST00000493653 SLC12A3P55017 1021 aa12.89□□□□□ -0.35
PDS5B-208ENST00000493653 ROR1Q01973 937 aa12.89□□□□□ -0.35
PDS5B-208ENST00000493653 PABPC1LQ4VXU2 614 aaKnown RBP12.89□□□□□ -0.35
PDS5B-208ENST00000493653 SEZ6Q53EL9 994 aa12.89□□□□□ -0.35
PDS5B-208ENST00000493653 XKR4Q5GH76 650 aa12.89□□□□□ -0.35
PDS5B-208ENST00000493653 VARS2Q5ST30 1063 aaKnown RBP12.89□□□□□ -0.35
PDS5B-208ENST00000493653 ALKAL1Q6UXT8 129 aa12.89□□□□□ -0.35
PDS5B-208ENST00000493653 SLC44A3Q8N4M1 653 aa12.89□□□□□ -0.35
PDS5B-208ENST00000493653 SPIRE2Q8WWL2 714 aa12.89□□□□□ -0.35
PDS5B-208ENST00000493653 ING5Q8WYH8 240 aa12.89□□□□□ -0.35
PDS5B-208ENST00000493653 FGF13Q92913 245 aa12.89□□□□□ -0.35
PDS5B-208ENST00000493653 FGF14Q92915 247 aa12.89□□□□□ -0.35
PDS5B-208ENST00000493653 NXPE3Q969Y0 559 aa12.89□□□□□ -0.35
PDS5B-208ENST00000493653 ZBTB45Q96K62 511 aaPredicted RBP12.89□□□□□ -0.35
PDS5B-208ENST00000493653 RTP3Q9BQQ7 232 aa12.89□□□□□ -0.35
PDS5B-208ENST00000493653 HCFC1R1Q9NWW0 138 aa12.89□□□□□ -0.35
PDS5B-208ENST00000493653 WNT16Q9UBV4 365 aa12.89□□□□□ -0.35
PDS5B-208ENST00000493653 TUBGCP4Q9UGJ1 667 aa12.89□□□□□ -0.35
PDS5B-208ENST00000493653 CDH7Q9ULB5 785 aa12.89□□□□□ -0.35
PDS5B-208ENST00000493653 SMC3Q9UQE7 1217 aa12.89□□□□□ -0.35
PDS5B-208ENST00000493653 NUB1Q9Y5A7 615 aa12.89□□□□□ -0.35
PDS5B-208ENST00000493653 BACE2Q9Y5Z0 518 aa12.89□□□□□ -0.35
PDS5B-208ENST00000493653 COL4A3Q01955 1670 aa12.89□□□□□ -0.35
PDS5B-208ENST00000493653 POU2F2P09086 479 aa12.88□□□□□ -0.35
PDS5B-208ENST00000493653 CXCL8P10145 99 aa12.88□□□□□ -0.35
PDS5B-208ENST00000493653 KCNE1P15382 129 aa12.88□□□□□ -0.35
PDS5B-208ENST00000493653 MCM4P33991 863 aa12.88□□□□□ -0.35
PDS5B-208ENST00000493653 ARPP19P56211 112 aa12.88□□□□□ -0.35
PDS5B-208ENST00000493653 ARL6IP4Q66PJ3 421 aaKnown RBP12.88□□□□□ -0.35
PDS5B-208ENST00000493653 PARM1Q6UWI2 310 aa12.88□□□□□ -0.35
PDS5B-208ENST00000493653 FRMD5Q7Z6J6 570 aa12.88□□□□□ -0.35
PDS5B-208ENST00000493653 SYT2Q8N9I0 419 aaPredicted RBP12.88□□□□□ -0.35
PDS5B-208ENST00000493653 RASSF8Q8NHQ8 419 aa12.88□□□□□ -0.35
PDS5B-208ENST00000493653 ITFG1Q8TB96 612 aa12.88□□□□□ -0.35
PDS5B-208ENST00000493653 KCND2Q9NZV8 630 aa12.88□□□□□ -0.35
PDS5B-208ENST00000493653 ZFP37Q9Y6Q3 630 aaPredicted RBP12.88□□□□□ -0.35
PDS5B-208ENST00000493653 WDR87Q6ZQQ6 2873 aa12.88□□□□□ -0.35
PDS5B-208ENST00000493653 GVINP1Q7Z2Y8 2422 aa12.88□□□□□ -0.35
PDS5B-208ENST00000493653 RIF1Q5UIP0 2472 aaKnown RBP12.87□□□□□ -0.35
PDS5B-208ENST00000493653 WDR27A2RRH5 827 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms