RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 ANKRD20A12PQ8NF67 263 aa14.57□□□□□ -0.08
MSH6-208ENST00000493177 CNOT6LQ96LI5 555 aaKnown RBP14.57□□□□□ -0.08
MSH6-208ENST00000493177 NECAB3Q96P71 396 aaPredicted RBP14.57□□□□□ -0.08
MSH6-208ENST00000493177 TCF25Q9BQ70 676 aa14.57□□□□□ -0.08
MSH6-208ENST00000493177 CCDC94Q9BW85 323 aaPredicted RBP14.57□□□□□ -0.08
MSH6-208ENST00000493177 KIAA1586Q9HCI6 787 aa14.57□□□□□ -0.08
MSH6-208ENST00000493177 UBN1Q9NPG3 1134 aa14.57□□□□□ -0.08
MSH6-208ENST00000493177 ZNF233A6NK53 670 aa14.56□□□□□ -0.08
MSH6-208ENST00000493177 MEIS3P2A8K0S8 358 aa14.56□□□□□ -0.08
MSH6-208ENST00000493177 KCNJ18B7U540 433 aa14.56□□□□□ -0.08
MSH6-208ENST00000493177 ZNF623O75123 536 aa14.56□□□□□ -0.08
MSH6-208ENST00000493177 AKAP3O75969 853 aa14.56□□□□□ -0.08
MSH6-208ENST00000493177 KRT13P13646 458 aa14.56□□□□□ -0.08
MSH6-208ENST00000493177 GTF2F1P35269 517 aaKnown RBP eCLIP14.56□□□□□ -0.082e-7■■■■■ 27.6
MSH6-208ENST00000493177 MTIF2P46199 727 aaKnown RBP14.56□□□□□ -0.08
MSH6-208ENST00000493177 PLCB3Q01970 1234 aa14.56□□□□□ -0.08
MSH6-208ENST00000493177 CAMK1Q14012 370 aa14.56□□□□□ -0.08
MSH6-208ENST00000493177 KCNJ12Q14500 433 aa14.56□□□□□ -0.08
MSH6-208ENST00000493177 SNRNP35Q16560 246 aaKnown RBP14.56□□□□□ -0.08
MSH6-208ENST00000493177 KYAT1Q16773 422 aa14.56□□□□□ -0.08
MSH6-208ENST00000493177 ZBTB41Q5SVQ8 909 aa14.56□□□□□ -0.08
MSH6-208ENST00000493177 UBXN11Q5T124 520 aa14.56□□□□□ -0.08
MSH6-208ENST00000493177 CBWD2Q8IUF1 395 aa14.56□□□□□ -0.08
MSH6-208ENST00000493177 CEP120Q8N960 986 aa14.56□□□□□ -0.08
MSH6-208ENST00000493177 FAM212AQ96EL1 285 aa14.56□□□□□ -0.08
MSH6-208ENST00000493177 TBC1D13Q9NVG8 400 aa14.56□□□□□ -0.08
MSH6-208ENST00000493177 SNTG2Q9NY99 539 aa14.56□□□□□ -0.08
MSH6-208ENST00000493177 KANSL3Q9P2N6 904 aa14.56□□□□□ -0.08
MSH6-208ENST00000493177 LZTS1Q9Y250 596 aa14.56□□□□□ -0.08
MSH6-208ENST00000493177 IPPQ9Y573 584 aa14.56□□□□□ -0.08
MSH6-208ENST00000493177 PCDHGC5Q9Y5F6 944 aa14.56□□□□□ -0.08
MSH6-208ENST00000493177 EYSQ5T1H1 3165 aa14.56□□□□□ -0.08
MSH6-208ENST00000493177 FSD2A1L4K1 749 aa14.55□□□□□ -0.08
MSH6-208ENST00000493177 GOLGA6L3A6NEY3 463 aa14.55□□□□□ -0.08
MSH6-208ENST00000493177 PER2O15055 1255 aa14.55□□□□□ -0.08
MSH6-208ENST00000493177 LINC01565O15544 149 aa14.55□□□□□ -0.08
MSH6-208ENST00000493177 OFD1O75665 1012 aa14.55□□□□□ -0.08
MSH6-208ENST00000493177 POMCP01189 267 aa14.55□□□□□ -0.08
MSH6-208ENST00000493177 IL9P15248 144 aa14.55□□□□□ -0.08
MSH6-208ENST00000493177 SSTR3P32745 418 aaPredicted RBP14.55□□□□□ -0.08
MSH6-208ENST00000493177 TNFSF9P41273 254 aa14.55□□□□□ -0.08
MSH6-208ENST00000493177 GRM5P41594 1212 aa14.55□□□□□ -0.08
MSH6-208ENST00000493177 YARSP54577 528 aaKnown RBP14.55□□□□□ -0.08
MSH6-208ENST00000493177 ERVFC1P60507 584 aa14.55□□□□□ -0.08
MSH6-208ENST00000493177 PLCB2Q00722 1185 aa14.55□□□□□ -0.08
MSH6-208ENST00000493177 SPAG1Q07617 926 aa14.55□□□□□ -0.08
MSH6-208ENST00000493177 SMC1AQ14683 1233 aaKnown RBP14.55□□□□□ -0.08
MSH6-208ENST00000493177 SLC39A11Q8N1S5 342 aa14.55□□□□□ -0.08
MSH6-208ENST00000493177 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.55□□□□□ -0.08
MSH6-208ENST00000493177 TMEM174Q8WUU8 243 aa14.55□□□□□ -0.08
MSH6-208ENST00000493177 ACAP3Q96P50 834 aa14.55□□□□□ -0.08
MSH6-208ENST00000493177 RPS6KC1Q96S38 1066 aa14.55□□□□□ -0.08
MSH6-208ENST00000493177 MKNK1Q9BUB5 465 aa14.55□□□□□ -0.08
MSH6-208ENST00000493177 NXF3Q9H4D5 531 aaKnown RBP14.55□□□□□ -0.08
MSH6-208ENST00000493177 RPF1Q9H9Y2 349 aaKnown RBP14.55□□□□□ -0.08
MSH6-208ENST00000493177 METTL14Q9HCE5 456 aaKnown RBP14.55□□□□□ -0.08
MSH6-208ENST00000493177 NGRNQ9NPE2 291 aaKnown RBP14.55□□□□□ -0.08
MSH6-208ENST00000493177 RBAKQ9NYW8 714 aaPredicted RBP14.55□□□□□ -0.08
MSH6-208ENST00000493177 PARP2Q9UGN5 583 aa14.55□□□□□ -0.08
MSH6-208ENST00000493177 ARMCX3Q9UH62 379 aaPredicted RBP14.55□□□□□ -0.08
MSH6-208ENST00000493177 HES2Q9Y543 173 aa14.55□□□□□ -0.08
MSH6-208ENST00000493177 MYO7AQ13402 2215 aa14.55□□□□□ -0.08
MSH6-208ENST00000493177 PES1O00541 588 aaKnown RBP14.54□□□□□ -0.08
MSH6-208ENST00000493177 ADRB2P07550 413 aa14.54□□□□□ -0.08
MSH6-208ENST00000493177 TPM2P07951 284 aa14.54□□□□□ -0.08
MSH6-208ENST00000493177 CLTAP09496 248 aa14.54□□□□□ -0.08
MSH6-208ENST00000493177 MLH1P40692 756 aa14.54□□□□□ -0.08
MSH6-208ENST00000493177 TCP11X2Q5H9J9 407 aa14.54□□□□□ -0.08
MSH6-208ENST00000493177 DCAF17Q5H9S7 520 aaPredicted RBP14.54□□□□□ -0.08
MSH6-208ENST00000493177 CDKAL1Q5VV42 579 aa14.54□□□□□ -0.08
MSH6-208ENST00000493177 TCERG1LQ5VWI1 586 aa14.54□□□□□ -0.08
MSH6-208ENST00000493177 AGMOQ6ZNB7 445 aa14.54□□□□□ -0.08
MSH6-208ENST00000493177 FRMD5Q7Z6J6 570 aa14.54□□□□□ -0.08
MSH6-208ENST00000493177 MRPL10Q7Z7H8 261 aaKnown RBP14.54□□□□□ -0.08
MSH6-208ENST00000493177 IRF2BP1Q8IU81 584 aa14.54□□□□□ -0.08
MSH6-208ENST00000493177 CCDC127Q96BQ5 260 aa14.54□□□□□ -0.08
MSH6-208ENST00000493177 FBXL18Q96ME1 805 aa14.54□□□□□ -0.08
MSH6-208ENST00000493177 CDCA3Q99618 268 aaPredicted RBP14.54□□□□□ -0.08
MSH6-208ENST00000493177 NRDE2Q9H7Z3 1164 aa14.54□□□□□ -0.08
MSH6-208ENST00000493177 CD207Q9UJ71 328 aa14.54□□□□□ -0.08
MSH6-208ENST00000493177 CPSF3Q9UKF6 684 aaKnown RBP14.54□□□□□ -0.08
MSH6-208ENST00000493177 MAPK13O15264 365 aa14.53□□□□□ -0.08
MSH6-208ENST00000493177 SERPINC1P01008 464 aa14.53□□□□□ -0.08
MSH6-208ENST00000493177 CXCL8P10145 99 aa14.53□□□□□ -0.08
MSH6-208ENST00000493177 ATP1A3P13637 1013 aa14.53□□□□□ -0.08
MSH6-208ENST00000493177 PRKCSHP14314 528 aaPredicted RBP14.53□□□□□ -0.08
MSH6-208ENST00000493177 ZNF18P17022 549 aa14.53□□□□□ -0.08
MSH6-208ENST00000493177 AKAP5P24588 427 aa14.53□□□□□ -0.08
MSH6-208ENST00000493177 EEF1GP26641 437 aaKnown RBP14.53□□□□□ -0.08
MSH6-208ENST00000493177 OR1G1P47890 313 aa14.53□□□□□ -0.08
MSH6-208ENST00000493177 CYP24A1Q07973 514 aa14.53□□□□□ -0.08
MSH6-208ENST00000493177 ADAM15Q13444 863 aa14.53□□□□□ -0.08
MSH6-208ENST00000493177 LLGL2Q6P1M3 1020 aa14.53□□□□□ -0.08
MSH6-208ENST00000493177 CRELD2Q6UXH1 353 aaPredicted RBP14.53□□□□□ -0.08
MSH6-208ENST00000493177 INTS8Q75QN2 995 aaKnown RBP14.53□□□□□ -0.08
MSH6-208ENST00000493177 USP37Q86T82 979 aa14.53□□□□□ -0.08
MSH6-208ENST00000493177 BRSK2Q8IWQ3 736 aa14.53□□□□□ -0.08
MSH6-208ENST00000493177 EFHBQ8N7U6 833 aa14.53□□□□□ -0.08
MSH6-208ENST00000493177 SMG8Q8ND04 991 aaKnown RBP14.53□□□□□ -0.08
MSH6-208ENST00000493177 FNBP1Q96RU3 617 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms