RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 SMTNP53814 917 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 PEX3P56589 373 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 PTGDRQ13258 359 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 NBR1Q14596 966 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 KYAT1Q16773 422 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 SLC44A4Q53GD3 710 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 RILPL1Q5EBL4 403 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 HYIQ5T013 277 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 RINT1Q6NUQ1 792 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 ZPBP2Q6X784 338 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 DTHD1Q6ZMT9 781 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 MAMSTRQ6ZN01 415 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 C1orf186Q6ZWK4 172 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 NPAS3Q8IXF0 933 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 DAW1Q8N136 415 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 LEMD2Q8NC56 503 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 APPL2Q8NEU8 664 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 SNX29Q8TEQ0 813 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 ANP32BQ92688 251 aaKnown RBP10□□□□□ -0.81
HDAC3-212ENST00000492407 BCO2Q9BYV7 579 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 CDT1Q9H211 546 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 CXCL16Q9H2A7 254 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 PLEKHA5Q9HAU0 1116 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 KMT5AQ9NQR1 393 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 DNMT3BQ9UBC3 853 aaKnown RBP10□□□□□ -0.81
HDAC3-212ENST00000492407 CACNG4Q9UBN1 327 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 MRPS23Q9Y3D9 190 aaKnown RBP10□□□□□ -0.81
HDAC3-212ENST00000492407 CFAP54Q96N23 3096 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 TDRD15B5MCY1 1934 aaKnown RBP9.99□□□□□ -0.81
HDAC3-212ENST00000492407 C2orf16Q68DN1 1984 aa9.99□□□□□ -0.81
HDAC3-212ENST00000492407 DMDP11532 3685 aa9.99□□□□□ -0.81
HDAC3-212ENST00000492407 PODXLO00592 558 aa9.99□□□□□ -0.81
HDAC3-212ENST00000492407 ABLIM1O14639 778 aa9.99□□□□□ -0.81
HDAC3-212ENST00000492407 HIP1RO75146 1068 aa9.99□□□□□ -0.81
HDAC3-212ENST00000492407 LRG1P02750 347 aa9.99□□□□□ -0.81
HDAC3-212ENST00000492407 SP9P0CG40 484 aa9.99□□□□□ -0.81
HDAC3-212ENST00000492407 TKTP29401 623 aaKnown RBP9.99□□□□□ -0.81
HDAC3-212ENST00000492407 RPS9P46781 194 aaKnown RBP9.99□□□□□ -0.81
HDAC3-212ENST00000492407 TOB1P50616 345 aaPredicted RBP9.99□□□□□ -0.81
HDAC3-212ENST00000492407 MLLT6P55198 1093 aaPredicted RBP9.99□□□□□ -0.81
HDAC3-212ENST00000492407 NTHL1P78549 312 aa9.99□□□□□ -0.81
HDAC3-212ENST00000492407 STRN3Q13033 797 aa9.99□□□□□ -0.81
HDAC3-212ENST00000492407 MLF2Q15773 248 aaPredicted RBP9.99□□□□□ -0.81
HDAC3-212ENST00000492407 ZNF568Q3ZCX4 644 aa9.99□□□□□ -0.81
HDAC3-212ENST00000492407 VARS2Q5ST30 1063 aaKnown RBP9.99□□□□□ -0.81
HDAC3-212ENST00000492407 MPZL3Q6UWV2 235 aa9.99□□□□□ -0.81
HDAC3-212ENST00000492407 ITFG1Q8TB96 612 aa9.99□□□□□ -0.81
HDAC3-212ENST00000492407 DNASE1L2Q92874 299 aa9.99□□□□□ -0.81
HDAC3-212ENST00000492407 CLDN23Q96B33 292 aa9.99□□□□□ -0.81
HDAC3-212ENST00000492407 ELSPBP1Q96BH3 223 aa9.99□□□□□ -0.81
HDAC3-212ENST00000492407 TCHPQ9BT92 498 aa9.99□□□□□ -0.81
HDAC3-212ENST00000492407 IER2Q9BTL4 223 aa9.99□□□□□ -0.81
HDAC3-212ENST00000492407 RPP25Q9BUL9 199 aaKnown RBP9.99□□□□□ -0.81
HDAC3-212ENST00000492407 KIFC3Q9BVG8 833 aa9.99□□□□□ -0.81
HDAC3-212ENST00000492407 TRPV5Q9NQA5 729 aa9.99□□□□□ -0.81
HDAC3-212ENST00000492407 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.99□□□□□ -0.81
HDAC3-212ENST00000492407 POLIQ9UNA4 740 aa9.99□□□□□ -0.81
HDAC3-212ENST00000492407 MRPS17Q9Y2R5 130 aaKnown RBP9.99□□□□□ -0.81
HDAC3-212ENST00000492407 MTCL1Q9Y4B5 1905 aaKnown RBP9.99□□□□□ -0.81
HDAC3-212ENST00000492407 E9PMD0 336 aa9.98□□□□□ -0.81
HDAC3-212ENST00000492407 MAN2B1O00754 1011 aa9.98□□□□□ -0.81
HDAC3-212ENST00000492407 SPTLC1O15269 473 aa9.98□□□□□ -0.81
HDAC3-212ENST00000492407 SEC24BO95487 1268 aa9.98□□□□□ -0.81
HDAC3-212ENST00000492407 DCNP07585 359 aaKnown RBP9.98□□□□□ -0.81
HDAC3-212ENST00000492407 RHOP08100 348 aa9.98□□□□□ -0.81
HDAC3-212ENST00000492407 PLS3P13797 630 aa9.98□□□□□ -0.81
HDAC3-212ENST00000492407 GLULP15104 373 aa9.98□□□□□ -0.81
HDAC3-212ENST00000492407 CYP3A5P20815 502 aa9.98□□□□□ -0.81
HDAC3-212ENST00000492407 ABCD1P33897 745 aa9.98□□□□□ -0.81
HDAC3-212ENST00000492407 ID4P47928 161 aa9.98□□□□□ -0.81
HDAC3-212ENST00000492407 ROR1Q01973 937 aa9.98□□□□□ -0.81
HDAC3-212ENST00000492407 SOX4Q06945 474 aaPredicted RBP9.98□□□□□ -0.81
HDAC3-212ENST00000492407 MAPK7Q13164 816 aa9.98□□□□□ -0.81
HDAC3-212ENST00000492407 GLRA4Q5JXX5 417 aa9.98□□□□□ -0.81
HDAC3-212ENST00000492407 ZBTB41Q5SVQ8 909 aa9.98□□□□□ -0.81
HDAC3-212ENST00000492407 ARL6IP4Q66PJ3 421 aaKnown RBP9.98□□□□□ -0.81
HDAC3-212ENST00000492407 ZNF852Q6ZMS4 543 aa9.98□□□□□ -0.81
HDAC3-212ENST00000492407 GPR161Q8N6U8 529 aaKnown RBP9.98□□□□□ -0.81
HDAC3-212ENST00000492407 SYT2Q8N9I0 419 aaPredicted RBP9.98□□□□□ -0.81
HDAC3-212ENST00000492407 C3orf58Q8NDZ4 430 aa9.98□□□□□ -0.81
HDAC3-212ENST00000492407 KCNG4Q8TDN1 519 aa9.98□□□□□ -0.81
HDAC3-212ENST00000492407 RUBCNQ92622 972 aa9.98□□□□□ -0.81
HDAC3-212ENST00000492407 E2F7Q96AV8 911 aa9.98□□□□□ -0.81
HDAC3-212ENST00000492407 SUSD3Q96L08 255 aa9.98□□□□□ -0.81
HDAC3-212ENST00000492407 TARS2Q9BW92 718 aaKnown RBP9.98□□□□□ -0.81
HDAC3-212ENST00000492407 FAM126AQ9BYI3 521 aaPredicted RBP9.98□□□□□ -0.81
HDAC3-212ENST00000492407 GPR88Q9GZN0 384 aa9.98□□□□□ -0.81
HDAC3-212ENST00000492407 LARSQ9P2J5 1176 aaKnown RBP9.98□□□□□ -0.81
HDAC3-212ENST00000492407 AFF4Q9UHB7 1163 aaKnown RBP9.98□□□□□ -0.81
HDAC3-212ENST00000492407 USP20Q9Y2K6 914 aa9.98□□□□□ -0.81
HDAC3-212ENST00000492407 NUB1Q9Y5A7 615 aa9.98□□□□□ -0.81
HDAC3-212ENST00000492407 PCDHB6Q9Y5E3 794 aa9.98□□□□□ -0.81
HDAC3-212ENST00000492407 PCDHGA2Q9Y5H1 932 aa9.98□□□□□ -0.81
HDAC3-212ENST00000492407 WDR27A2RRH5 827 aa9.97□□□□□ -0.81
HDAC3-212ENST00000492407 FAM170BA6NMN3 283 aa9.97□□□□□ -0.81
HDAC3-212ENST00000492407 M0QZQ0 153 aa9.97□□□□□ -0.81
HDAC3-212ENST00000492407 PRRG1O14668 218 aa9.97□□□□□ -0.81
HDAC3-212ENST00000492407 LAMTOR5O43504 91 aa9.97□□□□□ -0.81
HDAC3-212ENST00000492407 XPOTO43592 962 aaKnown RBP9.97□□□□□ -0.81
HDAC3-212ENST00000492407 OAZ2O95190 189 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms