RNA–Protein interactions for RNA: ENST00000491802.1

CPNE9-204, Transcript of copine family member 9, humanhuman

TSL 4

Gene CPNE9, Length 584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-204ENST00000491802 TGFB1I1O43294 461 aa25.25■■□□□ 1.63
CPNE9-204ENST00000491802 RHOBTB3O94955 611 aa25.25■■□□□ 1.63
CPNE9-204ENST00000491802 LDHAP00338 332 aaKnown RBP25.25■■□□□ 1.63
CPNE9-204ENST00000491802 NFICP08651 508 aa25.25■■□□□ 1.63
CPNE9-204ENST00000491802 JADE1Q6IE81 842 aa25.25■■□□□ 1.63
CPNE9-204ENST00000491802 DCLRE1AQ6PJP8 1040 aa25.25■■□□□ 1.63
CPNE9-204ENST00000491802 HS2ST1Q7LGA3 356 aa25.25■■□□□ 1.63
CPNE9-204ENST00000491802 B3GALT6Q96L58 329 aa25.25■■□□□ 1.63
CPNE9-204ENST00000491802 TIGD1Q96MW7 591 aa25.25■■□□□ 1.63
CPNE9-204ENST00000491802 TSPAN18Q96SJ8 248 aa25.25■■□□□ 1.63
CPNE9-204ENST00000491802 COL25A1Q9BXS0 654 aaPredicted RBP25.25■■□□□ 1.63
CPNE9-204ENST00000491802 CHST7Q9NS84 486 aa25.25■■□□□ 1.63
CPNE9-204ENST00000491802 CLEC1BQ9P126 229 aa25.25■■□□□ 1.63
CPNE9-204ENST00000491802 KIAA0391O15091 583 aaKnown RBP25.24■■□□□ 1.63
CPNE9-204ENST00000491802 XPOTO43592 962 aaKnown RBP25.24■■□□□ 1.63
CPNE9-204ENST00000491802 EXTL3O43909 919 aa25.24■■□□□ 1.63
CPNE9-204ENST00000491802 KINO60870 393 aaKnown RBP25.24■■□□□ 1.63
CPNE9-204ENST00000491802 SRGAP2BP0DMP2 458 aa25.24■■□□□ 1.63
CPNE9-204ENST00000491802 IGFBP6P24592 240 aaPredicted RBP25.24■■□□□ 1.63
CPNE9-204ENST00000491802 NDUFV1P49821 464 aa25.24■■□□□ 1.63
CPNE9-204ENST00000491802 POU5F1Q01860 360 aaKnown RBP25.24■■□□□ 1.63
CPNE9-204ENST00000491802 DLX2Q07687 328 aaPredicted RBP25.24■■□□□ 1.63
CPNE9-204ENST00000491802 KCNB1Q14721 858 aa25.24■■□□□ 1.63
CPNE9-204ENST00000491802 TMEM132DQ14C87 1099 aa25.24■■□□□ 1.63
CPNE9-204ENST00000491802 ZBTB6Q15916 424 aa25.24■■□□□ 1.63
CPNE9-204ENST00000491802 KNOP1Q1ED39 458 aaKnown RBP25.24■■□□□ 1.63
CPNE9-204ENST00000491802 USP41Q3LFD5 358 aa25.24■■□□□ 1.63
CPNE9-204ENST00000491802 KIAA1841Q6NSI8 718 aa25.24■■□□□ 1.63
CPNE9-204ENST00000491802 BRSK2Q8IWQ3 736 aa25.24■■□□□ 1.63
CPNE9-204ENST00000491802 GPD1LQ8N335 351 aa25.24■■□□□ 1.63
CPNE9-204ENST00000491802 TMEM130Q8N3G9 435 aa25.24■■□□□ 1.63
CPNE9-204ENST00000491802 ASB7Q9H672 318 aa25.24■■□□□ 1.63
CPNE9-204ENST00000491802 RBAKQ9NYW8 714 aaPredicted RBP25.24■■□□□ 1.63
CPNE9-204ENST00000491802 HSPBP1Q9NZL4 362 aa25.24■■□□□ 1.63
CPNE9-204ENST00000491802 GRXCR2A6NFK2 248 aa25.23■■□□□ 1.63
CPNE9-204ENST00000491802 H3BQ06 376 aaPredicted RBP25.23■■□□□ 1.63
CPNE9-204ENST00000491802 RPL9P32969 192 aaKnown RBP25.23■■□□□ 1.63
CPNE9-204ENST00000491802 GUCY2FP51841 1108 aa25.23■■□□□ 1.63
CPNE9-204ENST00000491802 RBM10P98175 930 aaKnown RBP25.23■■□□□ 1.63
CPNE9-204ENST00000491802 DSG1Q02413 1049 aa25.23■■□□□ 1.63
CPNE9-204ENST00000491802 ELAVL2Q12926 359 aaKnown RBP25.23■■□□□ 1.63
CPNE9-204ENST00000491802 FAM171A1Q5VUB5 890 aa25.23■■□□□ 1.63
CPNE9-204ENST00000491802 KIAA0319Q5VV43 1072 aa25.23■■□□□ 1.63
CPNE9-204ENST00000491802 CD300LGQ6UXG3 332 aa25.23■■□□□ 1.63
CPNE9-204ENST00000491802 VN1R2Q8NFZ6 395 aa25.23■■□□□ 1.63
CPNE9-204ENST00000491802 FAM50BQ9Y247 325 aa25.23■■□□□ 1.63
CPNE9-204ENST00000491802 DERAQ9Y315 318 aa25.23■■□□□ 1.63
CPNE9-204ENST00000491802 ANK1P16157 1881 aa25.23■■□□□ 1.63
CPNE9-204ENST00000491802 TULP1O00294 542 aaPredicted RBP25.22■■□□□ 1.63
CPNE9-204ENST00000491802 CLIC2O15247 247 aa25.22■■□□□ 1.63
CPNE9-204ENST00000491802 CLASP2O75122 1294 aaKnown RBP25.22■■□□□ 1.63
CPNE9-204ENST00000491802 IL18RAPO95256 599 aa25.22■■□□□ 1.63
CPNE9-204ENST00000491802 C1RP00736 705 aa25.22■■□□□ 1.63
CPNE9-204ENST00000491802 CYP3A5P20815 502 aa25.22■■□□□ 1.63
CPNE9-204ENST00000491802 UBE2HP62256 183 aa25.22■■□□□ 1.63
CPNE9-204ENST00000491802 SNRPFP62306 86 aaKnown RBP25.22■■□□□ 1.63
CPNE9-204ENST00000491802 LLGL2Q6P1M3 1020 aa25.22■■□□□ 1.63
CPNE9-204ENST00000491802 BEST2Q8NFU1 509 aa25.22■■□□□ 1.63
CPNE9-204ENST00000491802 ADAMTS19Q8TE59 1207 aa25.22■■□□□ 1.63
CPNE9-204ENST00000491802 EMILIN2Q9BXX0 1053 aa25.22■■□□□ 1.63
CPNE9-204ENST00000491802 RXFP1Q9HBX9 757 aa25.22■■□□□ 1.63
CPNE9-204ENST00000491802 CD207Q9UJ71 328 aa25.22■■□□□ 1.63
CPNE9-204ENST00000491802 HOOK1Q9UJC3 728 aaKnown RBP25.22■■□□□ 1.63
CPNE9-204ENST00000491802 C2CD2Q9Y426 696 aa25.22■■□□□ 1.63
CPNE9-204ENST00000491802 VWA8A3KMH1 1905 aa25.22■■□□□ 1.63
CPNE9-204ENST00000491802 I3L4J1 428 aa25.21■■□□□ 1.63
CPNE9-204ENST00000491802 CNPP09543 421 aaKnown RBP25.21■■□□□ 1.63
CPNE9-204ENST00000491802 LRPAP1P30533 357 aa25.21■■□□□ 1.63
CPNE9-204ENST00000491802 BRCC3P46736 316 aa25.21■■□□□ 1.63
CPNE9-204ENST00000491802 CYP2J2P51589 502 aa25.21■■□□□ 1.63
CPNE9-204ENST00000491802 WNT7BP56706 349 aa25.21■■□□□ 1.63
CPNE9-204ENST00000491802 SMAD4Q13485 552 aaKnown RBP25.21■■□□□ 1.63
CPNE9-204ENST00000491802 RTP2Q5QGT7 225 aa25.21■■□□□ 1.63
CPNE9-204ENST00000491802 SPATA1Q5VX52 437 aa25.21■■□□□ 1.63
CPNE9-204ENST00000491802 PTCRAQ6ISU1 281 aaPredicted RBP25.21■■□□□ 1.63
CPNE9-204ENST00000491802 PPFIBP1Q86W92 1011 aa25.21■■□□□ 1.63
CPNE9-204ENST00000491802 CEP57Q86XR8 500 aa25.21■■□□□ 1.63
CPNE9-204ENST00000491802 EFCAB13Q8IY85 973 aa25.21■■□□□ 1.63
CPNE9-204ENST00000491802 SMRP1Q8NCR6 262 aa25.21■■□□□ 1.63
CPNE9-204ENST00000491802 RIN2Q8WYP3 895 aaPredicted RBP25.21■■□□□ 1.63
CPNE9-204ENST00000491802 CASP10Q92851 521 aa25.21■■□□□ 1.63
CPNE9-204ENST00000491802 TTPALQ9BTX7 342 aa25.21■■□□□ 1.63
CPNE9-204ENST00000491802 BARX2Q9UMQ3 279 aaPredicted RBP25.21■■□□□ 1.63
CPNE9-204ENST00000491802 NUB1Q9Y5A7 615 aa25.21■■□□□ 1.63
CPNE9-204ENST00000491802 HCFC2Q9Y5Z7 792 aa25.21■■□□□ 1.63
CPNE9-204ENST00000491802 TRAPPC3O43617 180 aa25.2■■□□□ 1.62
CPNE9-204ENST00000491802 PRPF40AO75400 957 aaKnown RBP25.2■■□□□ 1.62
CPNE9-204ENST00000491802 HOXB8P17481 243 aaPredicted RBP25.2■■□□□ 1.62
CPNE9-204ENST00000491802 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.2■■□□□ 1.62
CPNE9-204ENST00000491802 CBWD2Q8IUF1 395 aa25.2■■□□□ 1.62
CPNE9-204ENST00000491802 GOLGA5Q8TBA6 731 aa25.2■■□□□ 1.62
CPNE9-204ENST00000491802 ERCC4Q92889 916 aaPredicted RBP25.2■■□□□ 1.62
CPNE9-204ENST00000491802 KLHL5Q96PQ7 755 aa25.2■■□□□ 1.62
CPNE9-204ENST00000491802 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.2■■□□□ 1.62
CPNE9-204ENST00000491802 RMND1Q9NWS8 449 aa25.2■■□□□ 1.62
CPNE9-204ENST00000491802 CGNQ9P2M7 1197 aaKnown RBP25.2■■□□□ 1.62
CPNE9-204ENST00000491802 KIF20AO95235 890 aa25.19■■□□□ 1.62
CPNE9-204ENST00000491802 SMC2O95347 1197 aa25.19■■□□□ 1.62
CPNE9-204ENST00000491802 MCM4P33991 863 aa25.19■■□□□ 1.62
CPNE9-204ENST00000491802 CREMQ03060 361 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms