RNA–Protein interactions for RNA: ENST00000491769.1

COL6A3-212, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5

Gene COL6A3, Length 6,731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-212ENST00000491769 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.81□□□□□ -0.2
COL6A3-212ENST00000491769 MYO1GB0I1T2 1018 aa13.81□□□□□ -0.2
COL6A3-212ENST00000491769 CAV1Q03135 178 aa13.81□□□□□ -0.2
COL6A3-212ENST00000491769 TP53BP2Q13625 1128 aa13.81□□□□□ -0.2
COL6A3-212ENST00000491769 C6orf10Q5SRN2 563 aa13.81□□□□□ -0.2
COL6A3-212ENST00000491769 STRIP1Q5VSL9 837 aa13.81□□□□□ -0.2
COL6A3-212ENST00000491769 VSTM4Q8IW00 320 aa13.81□□□□□ -0.2
COL6A3-212ENST00000491769 TBC1D16Q8TBP0 767 aa13.81□□□□□ -0.2
COL6A3-212ENST00000491769 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.81□□□□□ -0.2
COL6A3-212ENST00000491769 C1orf54Q8WWF1 131 aa13.81□□□□□ -0.2
COL6A3-212ENST00000491769 ARL8AQ96BM9 186 aa13.81□□□□□ -0.2
COL6A3-212ENST00000491769 C18orf8Q96DM3 657 aa13.81□□□□□ -0.2
COL6A3-212ENST00000491769 MYOZ2Q9NPC6 264 aa13.81□□□□□ -0.2
COL6A3-212ENST00000491769 GJB4Q9NTQ9 266 aa13.81□□□□□ -0.2
COL6A3-212ENST00000491769 PYCARDQ9ULZ3 195 aa13.81□□□□□ -0.2
COL6A3-212ENST00000491769 PSMD3O43242 534 aa13.81□□□□□ -0.2
COL6A3-212ENST00000491769 GRAP2O75791 330 aa13.81□□□□□ -0.2
COL6A3-212ENST00000491769 DPEP1P16444 411 aa13.81□□□□□ -0.2
COL6A3-212ENST00000491769 PCSK1P29120 753 aa13.81□□□□□ -0.2
COL6A3-212ENST00000491769 PBLDP30039 288 aaPredicted RBP13.81□□□□□ -0.2
COL6A3-212ENST00000491769 FAM47E-STBD1D6RA91 191 aa13.81□□□□□ -0.2
COL6A3-212ENST00000491769 CCDC188H7C350 402 aa13.81□□□□□ -0.2
COL6A3-212ENST00000491769 CYP26A1O43174 497 aa13.81□□□□□ -0.2
COL6A3-212ENST00000491769 MAPK9P45984 424 aa13.81□□□□□ -0.2
COL6A3-212ENST00000491769 ANKRD13AQ8IZ07 590 aa13.81□□□□□ -0.2
COL6A3-212ENST00000491769 PTPRN2Q92932 1015 aa13.81□□□□□ -0.2
COL6A3-212ENST00000491769 CATSPERBQ9H7T0 1116 aa13.81□□□□□ -0.2
COL6A3-212ENST00000491769 MMEP08473 750 aa13.81□□□□□ -0.2
COL6A3-212ENST00000491769 NMT1P30419 496 aaKnown RBP13.81□□□□□ -0.2
COL6A3-212ENST00000491769 CEP55Q53EZ4 464 aa13.81□□□□□ -0.2
COL6A3-212ENST00000491769 ANKMY2Q8IV38 441 aa13.81□□□□□ -0.2
COL6A3-212ENST00000491769 LPAR1Q92633 364 aa13.81□□□□□ -0.2
COL6A3-212ENST00000491769 OPTNQ96CV9 577 aa13.81□□□□□ -0.2
COL6A3-212ENST00000491769 CINPQ9BW66 212 aaPredicted RBP13.81□□□□□ -0.2
COL6A3-212ENST00000491769 BRD8Q9H0E9 1235 aa13.81□□□□□ -0.2
COL6A3-212ENST00000491769 AURKCQ9UQB9 309 aa13.81□□□□□ -0.2
COL6A3-212ENST00000491769 PFASO15067 1338 aa13.81□□□□□ -0.2
COL6A3-212ENST00000491769 PLCL1Q15111 1095 aa13.8□□□□□ -0.2
COL6A3-212ENST00000491769 BEND6Q5SZJ8 279 aaPredicted RBP13.8□□□□□ -0.2
COL6A3-212ENST00000491769 C1orf131Q8NDD1 294 aaKnown RBP13.8□□□□□ -0.2
COL6A3-212ENST00000491769 ECT2Q9H8V3 914 aa13.8□□□□□ -0.2
COL6A3-212ENST00000491769 CRLS1Q9UJA2 301 aa13.8□□□□□ -0.2
COL6A3-212ENST00000491769 SLC39A10Q9ULF5 831 aa13.8□□□□□ -0.2
COL6A3-212ENST00000491769 GSNP06396 782 aa13.8□□□□□ -0.2
COL6A3-212ENST00000491769 C16orf72Q14CZ0 275 aa13.8□□□□□ -0.2
COL6A3-212ENST00000491769 EMC2Q15006 297 aa13.8□□□□□ -0.2
COL6A3-212ENST00000491769 RESP18Q5W5W9 173 aa13.8□□□□□ -0.2
COL6A3-212ENST00000491769 JADE3Q92613 823 aa13.8□□□□□ -0.2
COL6A3-212ENST00000491769 PPP1R14AQ96A00 147 aa13.8□□□□□ -0.2
COL6A3-212ENST00000491769 ANGPT2O15123 496 aa13.8□□□□□ -0.2
COL6A3-212ENST00000491769 PDGFRAP16234 1089 aa13.8□□□□□ -0.2
COL6A3-212ENST00000491769 WEE1P30291 646 aa13.8□□□□□ -0.2
COL6A3-212ENST00000491769 PRCPP42785 496 aa13.8□□□□□ -0.2
COL6A3-212ENST00000491769 ARSEP51690 589 aa13.8□□□□□ -0.2
COL6A3-212ENST00000491769 PAWRQ96IZ0 340 aaKnown RBP13.8□□□□□ -0.2
COL6A3-212ENST00000491769 CALR3Q96L12 384 aaKnown RBP13.8□□□□□ -0.2
COL6A3-212ENST00000491769 PNKPQ96T60 521 aa13.8□□□□□ -0.2
COL6A3-212ENST00000491769 IGFLR1Q9H665 355 aa13.8□□□□□ -0.2
COL6A3-212ENST00000491769 KPNA1P52294 538 aaPredicted RBP13.8□□□□□ -0.2
COL6A3-212ENST00000491769 DPYDQ12882 1025 aa13.8□□□□□ -0.2
COL6A3-212ENST00000491769 ST13P4Q8IZP2 240 aaPredicted RBP13.8□□□□□ -0.2
COL6A3-212ENST00000491769 SHCBP1Q8NEM2 672 aa13.8□□□□□ -0.2
COL6A3-212ENST00000491769 KLK14Q9P0G3 267 aa13.8□□□□□ -0.2
COL6A3-212ENST00000491769 PP2D1A8MPX8 630 aa13.8□□□□□ -0.2
COL6A3-212ENST00000491769 H7C4K7 107 aa13.8□□□□□ -0.2
COL6A3-212ENST00000491769 ERVK-10P10266 1014 aa13.8□□□□□ -0.2
COL6A3-212ENST00000491769 BRAFP15056 766 aa13.8□□□□□ -0.2
COL6A3-212ENST00000491769 YY1P25490 414 aa13.8□□□□□ -0.2
COL6A3-212ENST00000491769 POLE2P56282 527 aa13.8□□□□□ -0.2
COL6A3-212ENST00000491769 MAP3K10Q02779 954 aa13.8□□□□□ -0.2
COL6A3-212ENST00000491769 ATF7IP2Q5U623 682 aa13.8□□□□□ -0.2
COL6A3-212ENST00000491769 PANX2Q96RD6 677 aa13.8□□□□□ -0.2
COL6A3-212ENST00000491769 DMAP1Q9NPF5 467 aaPredicted RBP13.8□□□□□ -0.2
COL6A3-212ENST00000491769 TCOF1Q13428 1488 aaKnown RBP13.8□□□□□ -0.2
COL6A3-212ENST00000491769 SOX11P35716 441 aa13.79□□□□□ -0.2
COL6A3-212ENST00000491769 RGS4P49798 205 aa13.79□□□□□ -0.2
COL6A3-212ENST00000491769 HIST2H2ACQ16777 129 aaPredicted RBP13.79□□□□□ -0.2
COL6A3-212ENST00000491769 HIST2H2AA3Q6FI13 130 aa13.79□□□□□ -0.2
COL6A3-212ENST00000491769 FAM161BQ96MY7 647 aa13.79□□□□□ -0.2
COL6A3-212ENST00000491769 SPASTQ9UBP0 616 aa13.79□□□□□ -0.2
COL6A3-212ENST00000491769 AATKQ6ZMQ8 1374 aa13.79□□□□□ -0.2
COL6A3-212ENST00000491769 H2AFYO75367 372 aaKnown RBP13.79□□□□□ -0.2
COL6A3-212ENST00000491769 CCDC159P0C7I6 412 aa13.79□□□□□ -0.2
COL6A3-212ENST00000491769 DNAJB2P25686 324 aa13.79□□□□□ -0.2
COL6A3-212ENST00000491769 USP11P51784 963 aa13.79□□□□□ -0.2
COL6A3-212ENST00000491769 TEX9Q8N6V9 391 aa13.79□□□□□ -0.2
COL6A3-212ENST00000491769 HEATR9A2RTY3 570 aa13.79□□□□□ -0.2
COL6A3-212ENST00000491769 DYRK3O43781 588 aa13.79□□□□□ -0.2
COL6A3-212ENST00000491769 CHRM3P20309 590 aa13.79□□□□□ -0.2
COL6A3-212ENST00000491769 GUCA1AP43080 201 aaPredicted RBP13.79□□□□□ -0.2
COL6A3-212ENST00000491769 PHACTR4Q8IZ21 702 aa13.79□□□□□ -0.2
COL6A3-212ENST00000491769 ZNF556Q9HAH1 456 aa13.79□□□□□ -0.2
COL6A3-212ENST00000491769 TUFT1Q9NNX1 390 aa13.79□□□□□ -0.2
COL6A3-212ENST00000491769 ERAP1Q9NZ08 941 aa13.79□□□□□ -0.2
COL6A3-212ENST00000491769 H0Y3Z8 333 aa13.79□□□□□ -0.2
COL6A3-212ENST00000491769 SPTLC1O15269 473 aa13.79□□□□□ -0.2
COL6A3-212ENST00000491769 MFAP3LO75121 409 aa13.79□□□□□ -0.2
COL6A3-212ENST00000491769 ZC3H11AO75152 810 aaKnown RBP eCLIP13.79□□□□□ -0.2
COL6A3-212ENST00000491769 DGAT1O75907 488 aa13.79□□□□□ -0.2
COL6A3-212ENST00000491769 FKBP9O95302 570 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms