RNA–Protein interactions for RNA: ENST00000491680.6

LCLAT1-211, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2

Gene LCLAT1, Length 1,610 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-211ENST00000491680 NFIL3Q16649 462 aa12.37□□□□□ -0.43
LCLAT1-211ENST00000491680 TDRD12Q587J7 1177 aaKnown RBP12.37□□□□□ -0.43
LCLAT1-211ENST00000491680 C16orf59Q7L2K0 433 aa12.37□□□□□ -0.43
LCLAT1-211ENST00000491680 OTOP2Q7RTS6 562 aa12.37□□□□□ -0.43
LCLAT1-211ENST00000491680 SERINC5Q86VE9 423 aa12.37□□□□□ -0.43
LCLAT1-211ENST00000491680 EFCAB13Q8IY85 973 aa12.37□□□□□ -0.43
LCLAT1-211ENST00000491680 TMEM161BQ8NDZ6 487 aa12.37□□□□□ -0.43
LCLAT1-211ENST00000491680 NTPCRQ9BSD7 190 aaKnown RBP12.37□□□□□ -0.43
LCLAT1-211ENST00000491680 CAPS2Q9BXY5 557 aa12.37□□□□□ -0.43
LCLAT1-211ENST00000491680 POLR3FQ9H1D9 316 aaPredicted RBP12.37□□□□□ -0.43
LCLAT1-211ENST00000491680 C17orf75Q9HAS0 396 aa12.37□□□□□ -0.43
LCLAT1-211ENST00000491680 PPME1Q9Y570 386 aa12.37□□□□□ -0.43
LCLAT1-211ENST00000491680 PCDHB13Q9Y5F0 798 aa12.37□□□□□ -0.43
LCLAT1-211ENST00000491680 ARID2Q68CP9 1835 aa12.36□□□□□ -0.43
LCLAT1-211ENST00000491680 ADGRA3Q8IWK6 1321 aa12.36□□□□□ -0.43
LCLAT1-211ENST00000491680 ATXN2Q99700 1313 aaKnown RBP12.36□□□□□ -0.43
LCLAT1-211ENST00000491680 K7ENM7 598 aa12.36□□□□□ -0.43
LCLAT1-211ENST00000491680 SLC16A4O15374 487 aa12.36□□□□□ -0.43
LCLAT1-211ENST00000491680 MAFO75444 373 aaPredicted RBP12.36□□□□□ -0.43
LCLAT1-211ENST00000491680 MYBL2P10244 700 aa12.36□□□□□ -0.43
LCLAT1-211ENST00000491680 HOXC8P31273 242 aa12.36□□□□□ -0.43
LCLAT1-211ENST00000491680 POLGP54098 1239 aaPredicted RBP12.36□□□□□ -0.43
LCLAT1-211ENST00000491680 POLR2FP61218 127 aaKnown RBP12.36□□□□□ -0.43
LCLAT1-211ENST00000491680 GFPT1Q06210 699 aaPredicted RBP12.36□□□□□ -0.43
LCLAT1-211ENST00000491680 KLHL30Q0D2K2 578 aa12.36□□□□□ -0.43
LCLAT1-211ENST00000491680 CUL1Q13616 776 aa12.36□□□□□ -0.43
LCLAT1-211ENST00000491680 ALCAMQ13740 583 aa12.36□□□□□ -0.43
LCLAT1-211ENST00000491680 CLUL1Q15846 466 aa12.36□□□□□ -0.43
LCLAT1-211ENST00000491680 ASIC2Q16515 512 aa12.36□□□□□ -0.43
LCLAT1-211ENST00000491680 ZNF618Q5T7W0 954 aa12.36□□□□□ -0.43
LCLAT1-211ENST00000491680 VPS36Q86VN1 386 aa12.36□□□□□ -0.43
LCLAT1-211ENST00000491680 ACTRT1Q8TDG2 376 aa12.36□□□□□ -0.43
LCLAT1-211ENST00000491680 ASAP3Q8TDY4 903 aa12.36□□□□□ -0.43
LCLAT1-211ENST00000491680 TAF4BQ92750 862 aa12.36□□□□□ -0.43
LCLAT1-211ENST00000491680 KCNN1Q92952 543 aa12.36□□□□□ -0.43
LCLAT1-211ENST00000491680 WNT8BQ93098 351 aa12.36□□□□□ -0.43
LCLAT1-211ENST00000491680 TMEM143Q96AN5 459 aa12.36□□□□□ -0.43
LCLAT1-211ENST00000491680 KIFC3Q9BVG8 833 aa12.36□□□□□ -0.43
LCLAT1-211ENST00000491680 LSM14BQ9BX40 385 aaKnown RBP12.36□□□□□ -0.43
LCLAT1-211ENST00000491680 GANQ9H2C0 597 aa12.36□□□□□ -0.43
LCLAT1-211ENST00000491680 TMEM59LQ9UK28 342 aa12.36□□□□□ -0.43
LCLAT1-211ENST00000491680 A0A087WUV0 522 aaPredicted RBP12.35□□□□□ -0.43
LCLAT1-211ENST00000491680 IGKV6-21A0A0C4DH24 114 aa12.35□□□□□ -0.43
LCLAT1-211ENST00000491680 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.35□□□□□ -0.43
LCLAT1-211ENST00000491680 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.35□□□□□ -0.43
LCLAT1-211ENST00000491680 RRN3P2A6NIE6 340 aa12.35□□□□□ -0.43
LCLAT1-211ENST00000491680 CPP00450 1065 aa12.35□□□□□ -0.43
LCLAT1-211ENST00000491680 NR3C1P04150 777 aa12.35□□□□□ -0.43
LCLAT1-211ENST00000491680 INSRRP14616 1297 aa12.35□□□□□ -0.43
LCLAT1-211ENST00000491680 GLRA2P23416 452 aa12.35□□□□□ -0.43
LCLAT1-211ENST00000491680 LRIG3Q6UXM1 1119 aa12.35□□□□□ -0.43
LCLAT1-211ENST00000491680 STXBP4Q6ZWJ1 553 aa12.35□□□□□ -0.43
LCLAT1-211ENST00000491680 B4GALNT4Q76KP1 1039 aa12.35□□□□□ -0.43
LCLAT1-211ENST00000491680 HAUS6Q7Z4H7 955 aa12.35□□□□□ -0.43
LCLAT1-211ENST00000491680 HERVK_113Q902F9 699 aa12.35□□□□□ -0.43
LCLAT1-211ENST00000491680 DMAC2Q9NW81 257 aa12.35□□□□□ -0.43
LCLAT1-211ENST00000491680 SALL4Q9UJQ4 1053 aa12.35□□□□□ -0.43
LCLAT1-211ENST00000491680 GGA2Q9UJY4 613 aa12.35□□□□□ -0.43
LCLAT1-211ENST00000491680 CCDC188H7C350 402 aa12.34□□□□□ -0.43
LCLAT1-211ENST00000491680 EBAG9O00559 213 aa12.34□□□□□ -0.43
LCLAT1-211ENST00000491680 HBP1O60381 514 aa12.34□□□□□ -0.43
LCLAT1-211ENST00000491680 PALMO75781 387 aa12.34□□□□□ -0.43
LCLAT1-211ENST00000491680 AFPP02771 609 aaKnown RBP12.34□□□□□ -0.43
LCLAT1-211ENST00000491680 CTSHP09668 335 aa12.34□□□□□ -0.43
LCLAT1-211ENST00000491680 NAP1L1P55209 391 aaKnown RBP12.34□□□□□ -0.43
LCLAT1-211ENST00000491680 SMAD3P84022 425 aaKnown RBP12.34□□□□□ -0.43
LCLAT1-211ENST00000491680 KCNH2Q12809 1159 aa12.34□□□□□ -0.43
LCLAT1-211ENST00000491680 DMP1Q13316 513 aaPredicted RBP12.34□□□□□ -0.43
LCLAT1-211ENST00000491680 DRP2Q13474 957 aa12.34□□□□□ -0.43
LCLAT1-211ENST00000491680 RPS6KA1Q15418 735 aa12.34□□□□□ -0.43
LCLAT1-211ENST00000491680 PPP2R5EQ16537 467 aa12.34□□□□□ -0.43
LCLAT1-211ENST00000491680 TRIM71Q2Q1W2 868 aaKnown RBP12.34□□□□□ -0.43
LCLAT1-211ENST00000491680 TAF2Q6P1X5 1199 aa12.34□□□□□ -0.43
LCLAT1-211ENST00000491680 RSPH3Q86UC2 560 aa12.34□□□□□ -0.43
LCLAT1-211ENST00000491680 SYCE1Q8N0S2 351 aa12.34□□□□□ -0.43
LCLAT1-211ENST00000491680 HDAC7Q8WUI4 952 aa12.34□□□□□ -0.43
LCLAT1-211ENST00000491680 SLC7A3Q8WY07 619 aa12.34□□□□□ -0.43
LCLAT1-211ENST00000491680 ACCSQ96QU6 501 aa12.34□□□□□ -0.43
LCLAT1-211ENST00000491680 AGPAT3Q9NRZ7 376 aa12.34□□□□□ -0.43
LCLAT1-211ENST00000491680 RBM12Q9NTZ6 932 aaKnown RBP12.34□□□□□ -0.43
LCLAT1-211ENST00000491680 ARHGAP28Q9P2N2 729 aa12.34□□□□□ -0.43
LCLAT1-211ENST00000491680 ARMCX3Q9UH62 379 aaPredicted RBP12.34□□□□□ -0.43
LCLAT1-211ENST00000491680 RSPH14Q9UHP6 348 aa12.34□□□□□ -0.43
LCLAT1-211ENST00000491680 CCDC169A6NNP5 214 aa12.33□□□□□ -0.43
LCLAT1-211ENST00000491680 BHMG1C9JSJ3 638 aaPredicted RBP12.33□□□□□ -0.43
LCLAT1-211ENST00000491680 CLIC2O15247 247 aa12.33□□□□□ -0.43
LCLAT1-211ENST00000491680 EIF3HO15372 352 aaKnown RBP eCLIP12.33□□□□□ -0.43
LCLAT1-211ENST00000491680 CAND2O75155 1236 aa12.33□□□□□ -0.43
LCLAT1-211ENST00000491680 ZMYND10O75800 440 aa12.33□□□□□ -0.43
LCLAT1-211ENST00000491680 NR2F2P24468 414 aa12.33□□□□□ -0.43
LCLAT1-211ENST00000491680 ADAM17P78536 824 aa12.33□□□□□ -0.43
LCLAT1-211ENST00000491680 CFAP58Q5T655 872 aa12.33□□□□□ -0.43
LCLAT1-211ENST00000491680 GPR153Q6NV75 609 aa12.33□□□□□ -0.43
LCLAT1-211ENST00000491680 TAS1R3Q7RTX0 852 aa12.33□□□□□ -0.43
LCLAT1-211ENST00000491680 IRF2BP2Q7Z5L9 587 aa12.33□□□□□ -0.43
LCLAT1-211ENST00000491680 MAP4K3Q8IVH8 894 aa12.33□□□□□ -0.43
LCLAT1-211ENST00000491680 USP38Q8NB14 1042 aa12.33□□□□□ -0.43
LCLAT1-211ENST00000491680 C3orf20Q8ND61 904 aa12.33□□□□□ -0.43
LCLAT1-211ENST00000491680 TMEM174Q8WUU8 243 aa12.33□□□□□ -0.43
LCLAT1-211ENST00000491680 TRAPPC12Q8WVT3 735 aa12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms