RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 HASPINQ8TF76 798 aa12.32□□□□□ -0.44
CLCNKA-206ENST00000491433 DEPDC1BQ8WUY9 529 aa12.32□□□□□ -0.44
CLCNKA-206ENST00000491433 E2F7Q96AV8 911 aa12.32□□□□□ -0.44
CLCNKA-206ENST00000491433 ADPGKQ9BRR6 497 aa12.32□□□□□ -0.44
CLCNKA-206ENST00000491433 PLA2G2FQ9BZM2 168 aa12.32□□□□□ -0.44
CLCNKA-206ENST00000491433 ANKEF1Q9NU02 776 aa12.32□□□□□ -0.44
CLCNKA-206ENST00000491433 BACE2Q9Y5Z0 518 aa12.32□□□□□ -0.44
CLCNKA-206ENST00000491433 VWA8A3KMH1 1905 aa12.32□□□□□ -0.44
CLCNKA-206ENST00000491433 ARHGEF37A1IGU5 675 aa12.31□□□□□ -0.44
CLCNKA-206ENST00000491433 M0R2N6 131 aa12.31□□□□□ -0.44
CLCNKA-206ENST00000491433 ARHGAP6O43182 974 aa12.31□□□□□ -0.44
CLCNKA-206ENST00000491433 SLC37A4O43826 429 aa12.31□□□□□ -0.44
CLCNKA-206ENST00000491433 PAPSS2O95340 614 aaPredicted RBP12.31□□□□□ -0.44
CLCNKA-206ENST00000491433 PSMC3P17980 439 aa12.31□□□□□ -0.44
CLCNKA-206ENST00000491433 FGFR3P22607 806 aa12.31□□□□□ -0.44
CLCNKA-206ENST00000491433 PSMA5P28066 241 aa12.31□□□□□ -0.44
CLCNKA-206ENST00000491433 INF2Q27J81 1249 aa12.31□□□□□ -0.44
CLCNKA-206ENST00000491433 BMP2KLQ5H9B9 411 aa12.31□□□□□ -0.44
CLCNKA-206ENST00000491433 NCAPH2Q6IBW4 605 aa12.31□□□□□ -0.44
CLCNKA-206ENST00000491433 PPP4R3CPQ6ZMV5 832 aa12.31□□□□□ -0.44
CLCNKA-206ENST00000491433 PROSER1Q86XN7 944 aa12.31□□□□□ -0.44
CLCNKA-206ENST00000491433 ZBTB8OSQ8IWT0 167 aa12.31□□□□□ -0.44
CLCNKA-206ENST00000491433 TMEFF1Q8IYR6 380 aa12.31□□□□□ -0.44
CLCNKA-206ENST00000491433 ZNF687Q8N1G0 1237 aa12.31□□□□□ -0.44
CLCNKA-206ENST00000491433 LEMD2Q8NC56 503 aa12.31□□□□□ -0.44
CLCNKA-206ENST00000491433 ZNF461Q8TAF7 563 aa12.31□□□□□ -0.44
CLCNKA-206ENST00000491433 RABGGTAQ92696 567 aa12.31□□□□□ -0.44
CLCNKA-206ENST00000491433 DYDC2Q96IM9 177 aa12.31□□□□□ -0.44
CLCNKA-206ENST00000491433 UROC1Q96N76 676 aa12.31□□□□□ -0.44
CLCNKA-206ENST00000491433 PAAF1Q9BRP4 392 aa12.31□□□□□ -0.44
CLCNKA-206ENST00000491433 AGXT2Q9BYV1 514 aa12.31□□□□□ -0.44
CLCNKA-206ENST00000491433 ZNF334Q9HCZ1 680 aaPredicted RBP12.31□□□□□ -0.44
CLCNKA-206ENST00000491433 XPNPEP1Q9NQW7 623 aa12.31□□□□□ -0.44
CLCNKA-206ENST00000491433 WRAP73Q9P2S5 460 aaPredicted RBP12.31□□□□□ -0.44
CLCNKA-206ENST00000491433 CDY1Q9Y6F8 540 aa12.31□□□□□ -0.44
CLCNKA-206ENST00000491433 GREB1Q4ZG55 1949 aa12.31□□□□□ -0.44
CLCNKA-206ENST00000491433 PTPN13Q12923 2485 aa12.3□□□□□ -0.44
CLCNKA-206ENST00000491433 PRRG1O14668 218 aa12.3□□□□□ -0.44
CLCNKA-206ENST00000491433 CPLX1O14810 134 aa12.3□□□□□ -0.44
CLCNKA-206ENST00000491433 ZNF263O14978 683 aa12.3□□□□□ -0.44
CLCNKA-206ENST00000491433 ADAM12O43184 909 aa12.3□□□□□ -0.44
CLCNKA-206ENST00000491433 CCNT1O60563 726 aaKnown RBP12.3□□□□□ -0.44
CLCNKA-206ENST00000491433 LYPLA2O95372 231 aa12.3□□□□□ -0.44
CLCNKA-206ENST00000491433 XBP1P17861 261 aa12.3□□□□□ -0.44
CLCNKA-206ENST00000491433 ARL2P36404 184 aa12.3□□□□□ -0.44
CLCNKA-206ENST00000491433 FAM187BQ17R55 369 aa12.3□□□□□ -0.44
CLCNKA-206ENST00000491433 TMEM132AQ24JP5 1023 aa12.3□□□□□ -0.44
CLCNKA-206ENST00000491433 CYP4A22Q5TCH4 519 aa12.3□□□□□ -0.44
CLCNKA-206ENST00000491433 PDZD4Q76G19 769 aaPredicted RBP12.3□□□□□ -0.44
CLCNKA-206ENST00000491433 CEP68Q76N32 757 aa12.3□□□□□ -0.44
CLCNKA-206ENST00000491433 APBB1IPQ7Z5R6 666 aaPredicted RBP12.3□□□□□ -0.44
CLCNKA-206ENST00000491433 MAP4K3Q8IVH8 894 aa12.3□□□□□ -0.44
CLCNKA-206ENST00000491433 TPH2Q8IWU9 490 aa12.3□□□□□ -0.44
CLCNKA-206ENST00000491433 CSGALNACT1Q8TDX6 532 aa12.3□□□□□ -0.44
CLCNKA-206ENST00000491433 LOXL4Q96JB6 756 aa12.3□□□□□ -0.44
CLCNKA-206ENST00000491433 JAKMIP1Q96N16 626 aaKnown RBP12.3□□□□□ -0.44
CLCNKA-206ENST00000491433 GPR88Q9GZN0 384 aa12.3□□□□□ -0.44
CLCNKA-206ENST00000491433 C2orf40Q9H1Z8 148 aa12.3□□□□□ -0.44
CLCNKA-206ENST00000491433 C8orf33Q9H7E9 229 aaPredicted RBP12.3□□□□□ -0.44
CLCNKA-206ENST00000491433 RGL1Q9NZL6 768 aa12.3□□□□□ -0.44
CLCNKA-206ENST00000491433 NEUROG3Q9Y4Z2 214 aa12.3□□□□□ -0.44
CLCNKA-206ENST00000491433 RAI2Q9Y5P3 530 aa12.3□□□□□ -0.44
CLCNKA-206ENST00000491433 PIAS3Q9Y6X2 628 aa12.3□□□□□ -0.44
CLCNKA-206ENST00000491433 TICRRQ7Z2Z1 1910 aa12.3□□□□□ -0.44
CLCNKA-206ENST00000491433 PDCD11Q14690 1871 aaKnown RBP12.29□□□□□ -0.44
CLCNKA-206ENST00000491433 TEP1Q99973 2627 aaKnown RBP12.29□□□□□ -0.44
CLCNKA-206ENST00000491433 F5P12259 2224 aa12.29□□□□□ -0.44
CLCNKA-206ENST00000491433 LRRIQ4A6NIV6 560 aa12.29□□□□□ -0.44
CLCNKA-206ENST00000491433 SHISA7A6NL88 538 aa12.29□□□□□ -0.44
CLCNKA-206ENST00000491433 B4GALT5O43286 388 aa12.29□□□□□ -0.44
CLCNKA-206ENST00000491433 B3GAT3O94766 335 aa12.29□□□□□ -0.44
CLCNKA-206ENST00000491433 SEC24BO95487 1268 aa12.29□□□□□ -0.44
CLCNKA-206ENST00000491433 TOP3BO95985 862 aaKnown RBP12.29□□□□□ -0.44
CLCNKA-206ENST00000491433 XRCC6P12956 609 aaKnown RBP eCLIP12.29□□□□□ -0.44
CLCNKA-206ENST00000491433 CEBPBP17676 345 aa12.29□□□□□ -0.44
CLCNKA-206ENST00000491433 GLRA2P23416 452 aa12.29□□□□□ -0.44
CLCNKA-206ENST00000491433 PDIA3P30101 505 aaKnown RBP12.29□□□□□ -0.44
CLCNKA-206ENST00000491433 GDI1P31150 447 aa12.29□□□□□ -0.44
CLCNKA-206ENST00000491433 EVCP57679 992 aa12.29□□□□□ -0.44
CLCNKA-206ENST00000491433 CCT2P78371 535 aaKnown RBP12.29□□□□□ -0.44
CLCNKA-206ENST00000491433 CYP4A11Q02928 519 aa12.29□□□□□ -0.44
CLCNKA-206ENST00000491433 PTGDRQ13258 359 aa12.29□□□□□ -0.44
CLCNKA-206ENST00000491433 CTTNQ14247 550 aaKnown RBP12.29□□□□□ -0.44
CLCNKA-206ENST00000491433 GRM2Q14416 872 aa12.29□□□□□ -0.44
CLCNKA-206ENST00000491433 SLC5A9Q2M3M2 681 aa12.29□□□□□ -0.44
CLCNKA-206ENST00000491433 PRSS36Q5K4E3 855 aa12.29□□□□□ -0.44
CLCNKA-206ENST00000491433 DGKKQ5KSL6 1271 aa12.29□□□□□ -0.44
CLCNKA-206ENST00000491433 IQCEQ6IPM2 695 aa12.29□□□□□ -0.44
CLCNKA-206ENST00000491433 ZNF605Q86T29 641 aa12.29□□□□□ -0.44
CLCNKA-206ENST00000491433 CDR2LQ86X02 465 aaPredicted RBP12.29□□□□□ -0.44
CLCNKA-206ENST00000491433 MFSD6LQ8IWD5 586 aa12.29□□□□□ -0.44
CLCNKA-206ENST00000491433 FAM200AQ8TCP9 573 aa12.29□□□□□ -0.44
CLCNKA-206ENST00000491433 ASAP3Q8TDY4 903 aa12.29□□□□□ -0.44
CLCNKA-206ENST00000491433 SMARCD2Q92925 531 aa12.29□□□□□ -0.44
CLCNKA-206ENST00000491433 ASB16Q96NS5 453 aa12.29□□□□□ -0.44
CLCNKA-206ENST00000491433 CORO1BQ9BR76 489 aa12.29□□□□□ -0.44
CLCNKA-206ENST00000491433 SNTG2Q9NY99 539 aa12.29□□□□□ -0.44
CLCNKA-206ENST00000491433 MAFFQ9ULX9 164 aa12.29□□□□□ -0.44
CLCNKA-206ENST00000491433 LAMA5O15230 3695 aa12.29□□□□□ -0.44
CLCNKA-206ENST00000491433 COL4A2P08572 1712 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms