RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 SYN3O14994 580 aa9.01□□□□□ -0.97
LSM2-213ENST00000491421 CCL16O15467 120 aa9.01□□□□□ -0.97
LSM2-213ENST00000491421 TRAK2O60296 914 aa9.01□□□□□ -0.97
LSM2-213ENST00000491421 PIGRP01833 764 aa9.01□□□□□ -0.97
LSM2-213ENST00000491421 LAMP2P13473 410 aa9.01□□□□□ -0.97
LSM2-213ENST00000491421 FSHRP23945 695 aa9.01□□□□□ -0.97
LSM2-213ENST00000491421 ABCD1P33897 745 aa9.01□□□□□ -0.97
LSM2-213ENST00000491421 MCM4P33991 863 aa9.01□□□□□ -0.97
LSM2-213ENST00000491421 DDIT3P35638 169 aa9.01□□□□□ -0.97
LSM2-213ENST00000491421 TXLNAP40222 546 aa9.01□□□□□ -0.97
LSM2-213ENST00000491421 CEBPZQ03701 1054 aaKnown RBP9.01□□□□□ -0.97
LSM2-213ENST00000491421 PPP2R3AQ06190 1150 aa9.01□□□□□ -0.97
LSM2-213ENST00000491421 PTPAQ15257 358 aa9.01□□□□□ -0.97
LSM2-213ENST00000491421 KYAT1Q16773 422 aa9.01□□□□□ -0.97
LSM2-213ENST00000491421 UVSSAQ2YD98 709 aa9.01□□□□□ -0.97
LSM2-213ENST00000491421 SPECC1Q5M775 1068 aa9.01□□□□□ -0.97
LSM2-213ENST00000491421 VARS2Q5ST30 1063 aaKnown RBP9.01□□□□□ -0.97
LSM2-213ENST00000491421 AXDND1Q5T1B0 1012 aaPredicted RBP9.01□□□□□ -0.97
LSM2-213ENST00000491421 FAM173BQ6P4H8 233 aa9.01□□□□□ -0.97
LSM2-213ENST00000491421 RSPO2Q6UXX9 243 aaPredicted RBP9.01□□□□□ -0.97
LSM2-213ENST00000491421 USP49Q70CQ1 688 aa9.01□□□□□ -0.97
LSM2-213ENST00000491421 KRI1Q8N9T8 703 aaKnown RBP9.01□□□□□ -0.97
LSM2-213ENST00000491421 KCNN1Q92952 543 aa9.01□□□□□ -0.97
LSM2-213ENST00000491421 KIF12Q96FN5 646 aa9.01□□□□□ -0.97
LSM2-213ENST00000491421 INTS4Q96HW7 963 aaKnown RBP9.01□□□□□ -0.97
LSM2-213ENST00000491421 EPSTI1Q96J88 318 aa9.01□□□□□ -0.97
LSM2-213ENST00000491421 CCSER1Q9C0I3 900 aa9.01□□□□□ -0.97
LSM2-213ENST00000491421 HAPLN2Q9GZV7 340 aa9.01□□□□□ -0.97
LSM2-213ENST00000491421 PLEKHA5Q9HAU0 1116 aa9.01□□□□□ -0.97
LSM2-213ENST00000491421 CCDC39Q9UFE4 941 aa9.01□□□□□ -0.97
LSM2-213ENST00000491421 TUBGCP4Q9UGJ1 667 aa9.01□□□□□ -0.97
LSM2-213ENST00000491421 FBXO2Q9UK22 296 aaPredicted RBP9.01□□□□□ -0.97
LSM2-213ENST00000491421 FBXL21Q9UKT6 434 aa9.01□□□□□ -0.97
LSM2-213ENST00000491421 DUSP12Q9UNI6 340 aa9.01□□□□□ -0.97
LSM2-213ENST00000491421 PIEZO1Q92508 2521 aa9□□□□□ -0.97
LSM2-213ENST00000491421 ZDBF2Q9HCK1 2354 aa9□□□□□ -0.97
LSM2-213ENST00000491421 TTC26A0AVF1 554 aa9□□□□□ -0.97
LSM2-213ENST00000491421 H7C4K7 107 aa9□□□□□ -0.97
LSM2-213ENST00000491421 K7ELQ4 463 aaPredicted RBP9□□□□□ -0.97
LSM2-213ENST00000491421 OGTO15294 1046 aa9□□□□□ -0.97
LSM2-213ENST00000491421 NARSO43776 548 aaKnown RBP9□□□□□ -0.97
LSM2-213ENST00000491421 POU2F2P09086 479 aa9□□□□□ -0.97
LSM2-213ENST00000491421 ELF1P32519 619 aa9□□□□□ -0.97
LSM2-213ENST00000491421 TNFSF9P41273 254 aa9□□□□□ -0.97
LSM2-213ENST00000491421 ARPP19P56211 112 aa9□□□□□ -0.97
LSM2-213ENST00000491421 NTHL1P78549 312 aa9□□□□□ -0.97
LSM2-213ENST00000491421 ROR1Q01973 937 aa9□□□□□ -0.97
LSM2-213ENST00000491421 SPAG1Q07617 926 aa9□□□□□ -0.97
LSM2-213ENST00000491421 ASTLQ6HA08 431 aaPredicted RBP9□□□□□ -0.97
LSM2-213ENST00000491421 SLC8B1Q6J4K2 584 aa9□□□□□ -0.97
LSM2-213ENST00000491421 RTL10Q7L3V2 364 aa9□□□□□ -0.97
LSM2-213ENST00000491421 ALYREFQ86V81 257 aaKnown RBP9□□□□□ -0.97
LSM2-213ENST00000491421 MAP4K3Q8IVH8 894 aa9□□□□□ -0.97
LSM2-213ENST00000491421 SIX5Q8N196 739 aa9□□□□□ -0.97
LSM2-213ENST00000491421 SLC44A3Q8N4M1 653 aa9□□□□□ -0.97
LSM2-213ENST00000491421 APPL2Q8NEU8 664 aa9□□□□□ -0.97
LSM2-213ENST00000491421 FLCNQ8NFG4 579 aa9□□□□□ -0.97
LSM2-213ENST00000491421 NXPE3Q969Y0 559 aa9□□□□□ -0.97
LSM2-213ENST00000491421 SUSD3Q96L08 255 aa9□□□□□ -0.97
LSM2-213ENST00000491421 CLIC6Q96NY7 704 aa9□□□□□ -0.97
LSM2-213ENST00000491421 MSTO1Q9BUK6 570 aa9□□□□□ -0.97
LSM2-213ENST00000491421 RPF1Q9H9Y2 349 aaKnown RBP9□□□□□ -0.97
LSM2-213ENST00000491421 STK17AQ9UEE5 414 aa9□□□□□ -0.97
LSM2-213ENST00000491421 CDH7Q9ULB5 785 aa9□□□□□ -0.97
LSM2-213ENST00000491421 UBQLN1Q9UMX0 589 aaKnown RBP9□□□□□ -0.97
LSM2-213ENST00000491421 MTMR6Q9Y217 621 aa9□□□□□ -0.97
LSM2-213ENST00000491421 SRPRBQ9Y5M8 271 aaKnown RBP9□□□□□ -0.97
LSM2-213ENST00000491421 GTF3C5Q9Y5Q8 519 aaPredicted RBP9□□□□□ -0.97
LSM2-213ENST00000491421 ZFP37Q9Y6Q3 630 aaPredicted RBP9□□□□□ -0.97
LSM2-213ENST00000491421 PLXNA3P51805 1871 aa9□□□□□ -0.97
LSM2-213ENST00000491421 DENND4AQ7Z401 1863 aa9□□□□□ -0.97
LSM2-213ENST00000491421 ZNF318Q5VUA4 2279 aa9□□□□□ -0.97
LSM2-213ENST00000491421 A0A0B4J269 797 aa8.99□□□□□ -0.97
LSM2-213ENST00000491421 WDR27A2RRH5 827 aa8.99□□□□□ -0.97
LSM2-213ENST00000491421 LACTBL1A8MY62 500 aa8.99□□□□□ -0.97
LSM2-213ENST00000491421 PRRG1O14668 218 aa8.99□□□□□ -0.97
LSM2-213ENST00000491421 XPOTO43592 962 aaKnown RBP8.99□□□□□ -0.97
LSM2-213ENST00000491421 GALR2O43603 387 aaPredicted RBP8.99□□□□□ -0.97
LSM2-213ENST00000491421 STX6O43752 255 aa8.99□□□□□ -0.97
LSM2-213ENST00000491421 FAM189A1O60320 539 aa8.99□□□□□ -0.97
LSM2-213ENST00000491421 LRG1P02750 347 aa8.99□□□□□ -0.97
LSM2-213ENST00000491421 CFHP08603 1231 aa8.99□□□□□ -0.97
LSM2-213ENST00000491421 SRFP11831 508 aa8.99□□□□□ -0.97
LSM2-213ENST00000491421 NMT1P30419 496 aaKnown RBP8.99□□□□□ -0.97
LSM2-213ENST00000491421 MRE11P49959 708 aa8.99□□□□□ -0.97
LSM2-213ENST00000491421 NUBP1P53384 320 aa8.99□□□□□ -0.97
LSM2-213ENST00000491421 GTF2BQ00403 316 aa8.99□□□□□ -0.97
LSM2-213ENST00000491421 TCF15Q12870 199 aa8.99□□□□□ -0.97
LSM2-213ENST00000491421 HTR4Q13639 388 aa8.99□□□□□ -0.97
LSM2-213ENST00000491421 MRPL58Q14197 206 aaKnown RBP8.99□□□□□ -0.97
LSM2-213ENST00000491421 ENOX2Q16206 610 aaKnown RBP8.99□□□□□ -0.97
LSM2-213ENST00000491421 CTXN3Q4LDR2 81 aa8.99□□□□□ -0.97
LSM2-213ENST00000491421 PABPC1LQ4VXU2 614 aaKnown RBP8.99□□□□□ -0.97
LSM2-213ENST00000491421 ZC2HC1CQ53FD0 456 aaPredicted RBP8.99□□□□□ -0.97
LSM2-213ENST00000491421 ZBTB41Q5SVQ8 909 aa8.99□□□□□ -0.97
LSM2-213ENST00000491421 RRAGBQ5VZM2 374 aa8.99□□□□□ -0.97
LSM2-213ENST00000491421 ZNF280DQ6N043 979 aa8.99□□□□□ -0.97
LSM2-213ENST00000491421 DYMQ7RTS9 669 aa8.99□□□□□ -0.97
LSM2-213ENST00000491421 TMEM105Q8N8V8 129 aa8.99□□□□□ -0.97
LSM2-213ENST00000491421 ST13P5Q8NFI4 369 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms