RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 PON1P27169 355 aa23.47■■□□□ 1.35
VCPKMT-204ENST00000491402 WDR5P61964 334 aaKnown RBP23.47■■□□□ 1.35
VCPKMT-204ENST00000491402 CRIPAKQ8N1N5 446 aa23.47■■□□□ 1.35
VCPKMT-204ENST00000491402 C1orf127Q8N9H9 656 aa23.47■■□□□ 1.35
VCPKMT-204ENST00000491402 PCMTD1Q96MG8 357 aaPredicted RBP23.47■■□□□ 1.35
VCPKMT-204ENST00000491402 ITIH6Q6UXX5 1313 aa23.47■■□□□ 1.35
VCPKMT-204ENST00000491402 LAMA2P24043 3122 aaKnown RBP23.47■■□□□ 1.35
VCPKMT-204ENST00000491402 VNN1O95497 513 aa23.46■■□□□ 1.35
VCPKMT-204ENST00000491402 FGFR1P11362 822 aa23.46■■□□□ 1.35
VCPKMT-204ENST00000491402 SLC9A1P19634 815 aa23.46■■□□□ 1.35
VCPKMT-204ENST00000491402 CLLU1OSQ5K130 101 aa23.46■■□□□ 1.35
VCPKMT-204ENST00000491402 TRIM65Q6PJ69 517 aa23.46■■□□□ 1.35
VCPKMT-204ENST00000491402 TMC6Q7Z403 805 aa23.46■■□□□ 1.35
VCPKMT-204ENST00000491402 LMO3Q8TAP4 145 aa23.46■■□□□ 1.35
VCPKMT-204ENST00000491402 SEMA4DQ92854 862 aa23.46■■□□□ 1.35
VCPKMT-204ENST00000491402 C18orf25Q96B23 403 aaPredicted RBP23.46■■□□□ 1.35
VCPKMT-204ENST00000491402 PPP1R10Q96QC0 940 aaKnown RBP23.46■■□□□ 1.35
VCPKMT-204ENST00000491402 RAB20Q9NX57 234 aa23.46■■□□□ 1.35
VCPKMT-204ENST00000491402 TUBGCP4Q9UGJ1 667 aa23.46■■□□□ 1.35
VCPKMT-204ENST00000491402 UBQLN1Q9UMX0 589 aaKnown RBP23.46■■□□□ 1.35
VCPKMT-204ENST00000491402 INPPL1O15357 1258 aa23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 EFCAB14O75071 495 aa23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 PHACTR2O75167 634 aa23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 LRRN2O75325 713 aa23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 OFD1O75665 1012 aa23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 PIK3CAP42336 1068 aa23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 KCNJ6P48051 423 aa23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 SCNN1GP51170 649 aa23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 GLB1LQ6UWU2 654 aa23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 DRC7Q8IY82 874 aa23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 TMEM130Q8N3G9 435 aa23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 RNPC3Q96LT9 517 aaKnown RBP23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 FAM207AQ9NSI2 230 aaPredicted RBP23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 MIOSQ9NXC5 875 aa23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 DPP3Q9NY33 737 aa23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 LRFN2Q9ULH4 789 aa23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 HLA-DRAP01903 254 aa23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 THP07101 528 aa23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 GUCY2FP51841 1108 aa23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 DEFB103AP81534 67 aa23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 NCOA4Q13772 614 aa23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 SCARA3Q6AZY7 606 aa23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 TMCO2Q7Z6W1 182 aaPredicted RBP23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 NPAS4Q8IUM7 802 aa23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 EHBP1Q8NDI1 1231 aa23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 BEST2Q8NFU1 509 aa23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 HELQQ8TDG4 1101 aa23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 PDLIM2Q96JY6 352 aa23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 LSM14BQ9BX40 385 aaKnown RBP23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 INTS2Q9H0H0 1204 aaKnown RBP23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 MTIF3Q9H2K0 278 aaKnown RBP23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 PRO3102Q9H379 93 aa23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 RNF216Q9NWF9 866 aaPredicted RBP23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 SIX4Q9UIU6 781 aa23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 ITGA11Q9UKX5 1188 aa23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 INPP5FQ9Y2H2 1132 aa23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 SLC4A7Q9Y6M7 1214 aa23.45■■□□□ 1.34
VCPKMT-204ENST00000491402 XPOTO43592 962 aaKnown RBP23.44■■□□□ 1.34
VCPKMT-204ENST00000491402 CST3P01034 146 aaPredicted RBP23.44■■□□□ 1.34
VCPKMT-204ENST00000491402 ITGB3P05106 788 aa23.44■■□□□ 1.34
VCPKMT-204ENST00000491402 APBA1Q02410 837 aa23.44■■□□□ 1.34
VCPKMT-204ENST00000491402 RASIP1Q5U651 963 aa23.44■■□□□ 1.34
VCPKMT-204ENST00000491402 SPC24Q8NBT2 197 aa23.44■■□□□ 1.34
VCPKMT-204ENST00000491402 CXorf38Q8TB03 319 aa23.44■■□□□ 1.34
VCPKMT-204ENST00000491402 UPP2O95045 317 aa23.43■■□□□ 1.34
VCPKMT-204ENST00000491402 TRIM21P19474 475 aaKnown RBP23.43■■□□□ 1.34
VCPKMT-204ENST00000491402 SOX4Q06945 474 aaPredicted RBP23.43■■□□□ 1.34
VCPKMT-204ENST00000491402 PLCB1Q9NQ66 1216 aa23.43■■□□□ 1.34
VCPKMT-204ENST00000491402 SLC38A7Q9NVC3 462 aa23.43■■□□□ 1.34
VCPKMT-204ENST00000491402 FNDC1Q4ZHG4 1894 aaPredicted RBP23.43■■□□□ 1.34
VCPKMT-204ENST00000491402 EPHB6O15197 1021 aa23.42■■□□□ 1.34
VCPKMT-204ENST00000491402 POMCP01189 267 aa23.42■■□□□ 1.34
VCPKMT-204ENST00000491402 AMHP03971 560 aa23.42■■□□□ 1.34
VCPKMT-204ENST00000491402 KRT19P08727 400 aa23.42■■□□□ 1.34
VCPKMT-204ENST00000491402 CYP3A5P20815 502 aa23.42■■□□□ 1.34
VCPKMT-204ENST00000491402 GRIK3Q13003 919 aa23.42■■□□□ 1.34
VCPKMT-204ENST00000491402 TRPC3Q13507 836 aa23.42■■□□□ 1.34
VCPKMT-204ENST00000491402 NAB2Q15742 525 aa23.42■■□□□ 1.34
VCPKMT-204ENST00000491402 PRPF38BQ5VTL8 546 aaKnown RBP23.42■■□□□ 1.34
VCPKMT-204ENST00000491402 DPY19L2P1Q6NXN4 242 aa23.42■■□□□ 1.34
VCPKMT-204ENST00000491402 NEK11Q8NG66 645 aa23.42■■□□□ 1.34
VCPKMT-204ENST00000491402 PI4K2AQ9BTU6 479 aa23.42■■□□□ 1.34
VCPKMT-204ENST00000491402 GOLGA2P5Q9HBQ8 144 aa23.42■■□□□ 1.34
VCPKMT-204ENST00000491402 SIX2Q9NPC8 291 aa23.42■■□□□ 1.34
VCPKMT-204ENST00000491402 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.42■■□□□ 1.34
VCPKMT-204ENST00000491402 SCN1AP35498 2009 aa23.42■■□□□ 1.34
VCPKMT-204ENST00000491402 PTPRSQ13332 1948 aa23.42■■□□□ 1.34
VCPKMT-204ENST00000491402 HOXA2O43364 376 aa23.42■■□□□ 1.34
VCPKMT-204ENST00000491402 NOL4O94818 638 aa23.42■■□□□ 1.34
VCPKMT-204ENST00000491402 POLR2BP30876 1174 aaKnown RBP23.42■■□□□ 1.34
VCPKMT-204ENST00000491402 TDHQ8IZJ6 230 aa23.42■■□□□ 1.34
VCPKMT-204ENST00000491402 ABI1Q8IZP0 508 aa23.42■■□□□ 1.34
VCPKMT-204ENST00000491402 TTYH3Q9C0H2 523 aa23.42■■□□□ 1.34
VCPKMT-204ENST00000491402 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.42■■□□□ 1.34
VCPKMT-204ENST00000491402 COLQQ9Y215 455 aaPredicted RBP23.42■■□□□ 1.34
VCPKMT-204ENST00000491402 GYPCP04921 128 aa23.41■■□□□ 1.34
VCPKMT-204ENST00000491402 MYL6P60660 151 aa23.41■■□□□ 1.34
VCPKMT-204ENST00000491402 FIGNQ5HY92 759 aa23.41■■□□□ 1.34
VCPKMT-204ENST00000491402 NOMO2Q5JPE7 1267 aa23.41■■□□□ 1.34
VCPKMT-204ENST00000491402 FAM117BQ6P1L5 589 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms