RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 TRAPPC10P48553 1259 aa9.28□□□□□ -0.92
APOBEC3F-204ENST00000491387 FXR2P51116 673 aaKnown RBP eCLIP9.28□□□□□ -0.92
APOBEC3F-204ENST00000491387 CLCNKBP51801 687 aa9.28□□□□□ -0.92
APOBEC3F-204ENST00000491387 MLLT6P55198 1093 aaPredicted RBP9.28□□□□□ -0.92
APOBEC3F-204ENST00000491387 SOX4Q06945 474 aaPredicted RBP9.28□□□□□ -0.92
APOBEC3F-204ENST00000491387 TRIM29Q14134 588 aa9.28□□□□□ -0.92
APOBEC3F-204ENST00000491387 PDIA5Q14554 519 aa9.28□□□□□ -0.92
APOBEC3F-204ENST00000491387 SLC5A9Q2M3M2 681 aa9.28□□□□□ -0.92
APOBEC3F-204ENST00000491387 PRSS36Q5K4E3 855 aa9.28□□□□□ -0.92
APOBEC3F-204ENST00000491387 VARS2Q5ST30 1063 aaKnown RBP9.28□□□□□ -0.92
APOBEC3F-204ENST00000491387 TPGS2Q68CL5 300 aa9.28□□□□□ -0.92
APOBEC3F-204ENST00000491387 HAUS3Q68CZ6 603 aa9.28□□□□□ -0.92
APOBEC3F-204ENST00000491387 ZNF852Q6ZMS4 543 aa9.28□□□□□ -0.92
APOBEC3F-204ENST00000491387 C4orf32Q8N8J7 132 aa9.28□□□□□ -0.92
APOBEC3F-204ENST00000491387 C3orf58Q8NDZ4 430 aa9.28□□□□□ -0.92
APOBEC3F-204ENST00000491387 ST13P5Q8NFI4 369 aaPredicted RBP9.28□□□□□ -0.92
APOBEC3F-204ENST00000491387 IFT74Q96LB3 600 aa9.28□□□□□ -0.92
APOBEC3F-204ENST00000491387 KXD1Q9BQD3 176 aa9.28□□□□□ -0.92
APOBEC3F-204ENST00000491387 IER2Q9BTL4 223 aa9.28□□□□□ -0.92
APOBEC3F-204ENST00000491387 FOXP1Q9H334 677 aaPredicted RBP9.28□□□□□ -0.92
APOBEC3F-204ENST00000491387 TMEM134Q9H6X4 195 aa9.28□□□□□ -0.92
APOBEC3F-204ENST00000491387 TRPV4Q9HBA0 871 aa9.28□□□□□ -0.92
APOBEC3F-204ENST00000491387 TOPORSQ9NS56 1045 aaPredicted RBP9.28□□□□□ -0.92
APOBEC3F-204ENST00000491387 SLC38A7Q9NVC3 462 aa9.28□□□□□ -0.92
APOBEC3F-204ENST00000491387 SPATA6Q9NWH7 488 aaPredicted RBP9.28□□□□□ -0.92
APOBEC3F-204ENST00000491387 POLIQ9UNA4 740 aa9.28□□□□□ -0.92
APOBEC3F-204ENST00000491387 USP20Q9Y2K6 914 aa9.28□□□□□ -0.92
APOBEC3F-204ENST00000491387 GDAQ9Y2T3 454 aa9.28□□□□□ -0.92
APOBEC3F-204ENST00000491387 MRPS23Q9Y3D9 190 aaKnown RBP9.28□□□□□ -0.92
APOBEC3F-204ENST00000491387 STK24Q9Y6E0 443 aa9.28□□□□□ -0.92
APOBEC3F-204ENST00000491387 KIF26AQ9ULI4 1882 aaPredicted RBP9.28□□□□□ -0.92
APOBEC3F-204ENST00000491387 COL4A3Q01955 1670 aa9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 H7C4K7 107 aa9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 K7ERI5 159 aa9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 MAN2B1O00754 1011 aa9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 ABLIM1O14639 778 aa9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 ZNF197O14709 1029 aa9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 TDGF1P13385 188 aa9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 TGM1P22735 817 aa9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 FCARP24071 287 aa9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 TARSP26639 723 aaKnown RBP9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 RPL9P32969 192 aaKnown RBP9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 EPHA5P54756 1037 aa9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 ROR1Q01973 937 aa9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 CSTF1Q05048 431 aaKnown RBP9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 ADCY1Q08828 1119 aa9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 UBXN2BQ14CS0 331 aa9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 SAFBQ15424 915 aaKnown RBP eCLIP9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 ZNF174Q15697 407 aa9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 ECM1Q16610 540 aa9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 GLRA4Q5JXX5 417 aa9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 TANGO2Q6ICL3 276 aa9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 TPRG1Q6ZUI0 275 aa9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 MAP4K3Q8IVH8 894 aa9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 DCLK2Q8N568 766 aa9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 ATRIPQ8WXE1 791 aa9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 ACO2Q99798 780 aaKnown RBP9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 LLPHQ9BRT6 129 aaKnown RBP9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 NTPCRQ9BSD7 190 aaKnown RBP9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 PLA2G2FQ9BZM2 168 aa9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 CDT1Q9H211 546 aa9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 CHRDQ9H2X0 955 aa9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 C17orf75Q9HAS0 396 aa9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 CNTN3Q9P232 1028 aa9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 ARHGAP28Q9P2N2 729 aa9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 LIMCH1Q9UPQ0 1083 aa9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 RBM19Q9Y4C8 960 aaKnown RBP9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 KMT2BQ9UMN6 2715 aaPredicted RBP9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 CNOT1A5YKK6 2376 aaKnown RBP9.27□□□□□ -0.93
APOBEC3F-204ENST00000491387 OBSL1O75147 1896 aa9.26□□□□□ -0.93
APOBEC3F-204ENST00000491387 WDR27A2RRH5 827 aa9.26□□□□□ -0.93
APOBEC3F-204ENST00000491387 PRR5-ARHGAP8B1AHC4 643 aa9.26□□□□□ -0.93
APOBEC3F-204ENST00000491387 PODXLO00592 558 aa9.26□□□□□ -0.93
APOBEC3F-204ENST00000491387 MCF2P10911 925 aa9.26□□□□□ -0.93
APOBEC3F-204ENST00000491387 CEBPBP17676 345 aa9.26□□□□□ -0.93
APOBEC3F-204ENST00000491387 BRCC3P46736 316 aa9.26□□□□□ -0.93
APOBEC3F-204ENST00000491387 NPTX2P47972 431 aa9.26□□□□□ -0.93
APOBEC3F-204ENST00000491387 TOB1P50616 345 aaPredicted RBP9.26□□□□□ -0.93
APOBEC3F-204ENST00000491387 YARSP54577 528 aaKnown RBP9.26□□□□□ -0.93
APOBEC3F-204ENST00000491387 ARHGAP8P85298 464 aa9.26□□□□□ -0.93
APOBEC3F-204ENST00000491387 TMEM132AQ24JP5 1023 aa9.26□□□□□ -0.93
APOBEC3F-204ENST00000491387 TAS1R3Q7RTX0 852 aa9.26□□□□□ -0.93
APOBEC3F-204ENST00000491387 DAW1Q8N136 415 aa9.26□□□□□ -0.93
APOBEC3F-204ENST00000491387 IGSF22Q8N9C0 903 aa9.26□□□□□ -0.93
APOBEC3F-204ENST00000491387 LEMD2Q8NC56 503 aa9.26□□□□□ -0.93
APOBEC3F-204ENST00000491387 BEST2Q8NFU1 509 aa9.26□□□□□ -0.93
APOBEC3F-204ENST00000491387 FBXO18Q8NFZ0 1043 aa9.26□□□□□ -0.93
APOBEC3F-204ENST00000491387 ING5Q8WYH8 240 aa9.26□□□□□ -0.93
APOBEC3F-204ENST00000491387 KCNN1Q92952 543 aa9.26□□□□□ -0.93
APOBEC3F-204ENST00000491387 MCRS1Q96EZ8 462 aa9.26□□□□□ -0.93
APOBEC3F-204ENST00000491387 C8orf76Q96K31 380 aa9.26□□□□□ -0.93
APOBEC3F-204ENST00000491387 SUSD3Q96L08 255 aa9.26□□□□□ -0.93
APOBEC3F-204ENST00000491387 ZMAT2Q96NC0 199 aaKnown RBP9.26□□□□□ -0.93
APOBEC3F-204ENST00000491387 ASB16Q96NS5 453 aa9.26□□□□□ -0.93
APOBEC3F-204ENST00000491387 KIFC3Q9BVG8 833 aa9.26□□□□□ -0.93
APOBEC3F-204ENST00000491387 CCDC94Q9BW85 323 aaPredicted RBP9.26□□□□□ -0.93
APOBEC3F-204ENST00000491387 MRPL4Q9BYD3 311 aaKnown RBP9.26□□□□□ -0.93
APOBEC3F-204ENST00000491387 BHMT2Q9H2M3 363 aa9.26□□□□□ -0.93
APOBEC3F-204ENST00000491387 GOLGA2P5Q9HBQ8 144 aa9.26□□□□□ -0.93
APOBEC3F-204ENST00000491387 ZFP14Q9HCL3 533 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms