RNA–Protein interactions for RNA: ENST00000491134.5

PRDM2-209, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 1,100 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-209ENST00000491134 MTMR12Q9C0I1 747 aa19.73■□□□□ 0.75
PRDM2-209ENST00000491134 GOLGA2P5Q9HBQ8 144 aa19.73■□□□□ 0.75
PRDM2-209ENST00000491134 SLC38A7Q9NVC3 462 aa19.73■□□□□ 0.75
PRDM2-209ENST00000491134 DNAJB4Q9UDY4 337 aa19.73■□□□□ 0.75
PRDM2-209ENST00000491134 LIMA1Q9UHB6 759 aaKnown RBP19.73■□□□□ 0.75
PRDM2-209ENST00000491134 SIX4Q9UIU6 781 aa19.73■□□□□ 0.75
PRDM2-209ENST00000491134 COLQQ9Y215 455 aaPredicted RBP19.73■□□□□ 0.75
PRDM2-209ENST00000491134 YBX2Q9Y2T7 364 aaKnown RBP19.73■□□□□ 0.75
PRDM2-209ENST00000491134 TRANK1O15050 2925 aa19.73■□□□□ 0.75
PRDM2-209ENST00000491134 PMM2O15305 246 aa19.72■□□□□ 0.75
PRDM2-209ENST00000491134 ATP1A3P13637 1013 aa19.72■□□□□ 0.75
PRDM2-209ENST00000491134 IGFBP6P24592 240 aaPredicted RBP19.72■□□□□ 0.75
PRDM2-209ENST00000491134 GTF2H1P32780 548 aa19.72■□□□□ 0.75
PRDM2-209ENST00000491134 AP3M2P53677 418 aa19.72■□□□□ 0.75
PRDM2-209ENST00000491134 BTG3Q14201 252 aaPredicted RBP19.72■□□□□ 0.75
PRDM2-209ENST00000491134 DUOXA2Q1HG44 320 aa19.72■□□□□ 0.75
PRDM2-209ENST00000491134 CD300LGQ6UXG3 332 aa19.72■□□□□ 0.75
PRDM2-209ENST00000491134 PAAF1Q9BRP4 392 aa19.72■□□□□ 0.75
PRDM2-209ENST00000491134 PBX4Q9BYU1 374 aa19.72■□□□□ 0.75
PRDM2-209ENST00000491134 DPP3Q9NY33 737 aa19.72■□□□□ 0.75
PRDM2-209ENST00000491134 CACNG4Q9UBN1 327 aa19.72■□□□□ 0.75
PRDM2-209ENST00000491134 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.72■□□□□ 0.75
PRDM2-209ENST00000491134 LINC01553A4QN01 128 aa19.71■□□□□ 0.75
PRDM2-209ENST00000491134 BECN2A8MW95 431 aa19.71■□□□□ 0.75
PRDM2-209ENST00000491134 VNN1O95497 513 aa19.71■□□□□ 0.75
PRDM2-209ENST00000491134 TNNI1P19237 187 aa19.71■□□□□ 0.75
PRDM2-209ENST00000491134 PBX2P40425 430 aa19.71■□□□□ 0.75
PRDM2-209ENST00000491134 TFAMQ00059 246 aaKnown RBP19.71■□□□□ 0.75
PRDM2-209ENST00000491134 KRT31Q15323 416 aa19.71■□□□□ 0.75
PRDM2-209ENST00000491134 UPP1Q16831 310 aa19.71■□□□□ 0.75
PRDM2-209ENST00000491134 TDRD10Q5VZ19 366 aaKnown RBP19.71■□□□□ 0.75
PRDM2-209ENST00000491134 SV2AQ7L0J3 742 aa19.71■□□□□ 0.75
PRDM2-209ENST00000491134 TRAPPC11Q7Z392 1133 aa19.71■□□□□ 0.75
PRDM2-209ENST00000491134 USP37Q86T82 979 aa19.71■□□□□ 0.75
PRDM2-209ENST00000491134 BEST2Q8NFU1 509 aa19.71■□□□□ 0.75
PRDM2-209ENST00000491134 CACTINQ8WUQ7 758 aaKnown RBP19.71■□□□□ 0.75
PRDM2-209ENST00000491134 TMEM175Q9BSA9 504 aa19.71■□□□□ 0.75
PRDM2-209ENST00000491134 TUBGCP2Q9BSJ2 902 aa19.71■□□□□ 0.75
PRDM2-209ENST00000491134 RBSNQ9H1K0 784 aa19.71■□□□□ 0.75
PRDM2-209ENST00000491134 PIRO00625 290 aa19.7■□□□□ 0.74
PRDM2-209ENST00000491134 PPEF2O14830 753 aa19.7■□□□□ 0.74
PRDM2-209ENST00000491134 XPOTO43592 962 aaKnown RBP19.7■□□□□ 0.74
PRDM2-209ENST00000491134 EFEMP2O95967 443 aa19.7■□□□□ 0.74
PRDM2-209ENST00000491134 GALTP07902 379 aa19.7■□□□□ 0.74
PRDM2-209ENST00000491134 GCLMP48507 274 aa19.7■□□□□ 0.74
PRDM2-209ENST00000491134 SLC11A1P49279 550 aa19.7■□□□□ 0.74
PRDM2-209ENST00000491134 SMAD3P84022 425 aaKnown RBP19.7■□□□□ 0.74
PRDM2-209ENST00000491134 RNASELQ05823 741 aaKnown RBP19.7■□□□□ 0.74
PRDM2-209ENST00000491134 KCNH2Q12809 1159 aa19.7■□□□□ 0.74
PRDM2-209ENST00000491134 MAN2A1Q16706 1144 aa19.7■□□□□ 0.74
PRDM2-209ENST00000491134 LRIT3Q3SXY7 679 aa19.7■□□□□ 0.74
PRDM2-209ENST00000491134 CBWD6Q4V339 395 aa19.7■□□□□ 0.74
PRDM2-209ENST00000491134 CBWD3Q5JTY5 395 aa19.7■□□□□ 0.74
PRDM2-209ENST00000491134 CBWD5Q5RIA9 395 aa19.7■□□□□ 0.74
PRDM2-209ENST00000491134 C3orf58Q8NDZ4 430 aa19.7■□□□□ 0.74
PRDM2-209ENST00000491134 TMEM8AQ9HCN3 771 aa19.7■□□□□ 0.74
PRDM2-209ENST00000491134 COQ4Q9Y3A0 265 aa19.7■□□□□ 0.74
PRDM2-209ENST00000491134 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.7■□□□□ 0.74
PRDM2-209ENST00000491134 CASTOR2A6NHX0 329 aa19.69■□□□□ 0.74
PRDM2-209ENST00000491134 F8W810 466 aa19.69■□□□□ 0.74
PRDM2-209ENST00000491134 CST3P01034 146 aaPredicted RBP19.69■□□□□ 0.74
PRDM2-209ENST00000491134 TMEM191BP0C7N4 346 aa19.69■□□□□ 0.74
PRDM2-209ENST00000491134 RPL9P32969 192 aaKnown RBP19.69■□□□□ 0.74
PRDM2-209ENST00000491134 MTIF2P46199 727 aaKnown RBP19.69■□□□□ 0.74
PRDM2-209ENST00000491134 FMO5P49326 533 aa19.69■□□□□ 0.74
PRDM2-209ENST00000491134 CLCNKBP51801 687 aa19.69■□□□□ 0.74
PRDM2-209ENST00000491134 BCAR1P56945 870 aa19.69■□□□□ 0.74
PRDM2-209ENST00000491134 DCAF17Q5H9S7 520 aaPredicted RBP19.69■□□□□ 0.74
PRDM2-209ENST00000491134 C9orf57Q5W0N0 161 aa19.69■□□□□ 0.74
PRDM2-209ENST00000491134 FIBCD1Q8N539 461 aa19.69■□□□□ 0.74
PRDM2-209ENST00000491134 RNF214Q8ND24 703 aa19.69■□□□□ 0.74
PRDM2-209ENST00000491134 ANKRD36BP1Q96IX9 119 aa19.69■□□□□ 0.74
PRDM2-209ENST00000491134 UROC1Q96N76 676 aa19.69■□□□□ 0.74
PRDM2-209ENST00000491134 MARCH5Q9NX47 278 aa19.69■□□□□ 0.74
PRDM2-209ENST00000491134 MAGEC2Q9UBF1 373 aaPredicted RBP19.69■□□□□ 0.74
PRDM2-209ENST00000491134 ITGA11Q9UKX5 1188 aa19.69■□□□□ 0.74
PRDM2-209ENST00000491134 TMEM189-UBE2V1I3L0A0 370 aa19.68■□□□□ 0.74
PRDM2-209ENST00000491134 NRP1O14786 923 aa19.68■□□□□ 0.74
PRDM2-209ENST00000491134 STX10O60499 249 aa19.68■□□□□ 0.74
PRDM2-209ENST00000491134 ZC3H11AO75152 810 aaKnown RBP eCLIP19.68■□□□□ 0.74
PRDM2-209ENST00000491134 TNNC2P02585 160 aa19.68■□□□□ 0.74
PRDM2-209ENST00000491134 AFPP02771 609 aaKnown RBP19.68■□□□□ 0.74
PRDM2-209ENST00000491134 CA3P07451 260 aa19.68■□□□□ 0.74
PRDM2-209ENST00000491134 TAP1Q03518 808 aa19.68■□□□□ 0.74
PRDM2-209ENST00000491134 TCERG1LQ5VWI1 586 aa19.68■□□□□ 0.74
PRDM2-209ENST00000491134 KCNT2Q6UVM3 1135 aa19.68■□□□□ 0.74
PRDM2-209ENST00000491134 SPRED2Q7Z698 418 aa19.68■□□□□ 0.74
PRDM2-209ENST00000491134 TMEM173Q86WV6 379 aaPredicted RBP19.68■□□□□ 0.74
PRDM2-209ENST00000491134 COLGALT1Q8NBJ5 622 aa19.68■□□□□ 0.74
PRDM2-209ENST00000491134 BCL7CQ8WUZ0 217 aaPredicted RBP19.68■□□□□ 0.74
PRDM2-209ENST00000491134 RABGGTAQ92696 567 aa19.68■□□□□ 0.74
PRDM2-209ENST00000491134 DDX27Q96GQ7 796 aaKnown RBP19.68■□□□□ 0.74
PRDM2-209ENST00000491134 XYLT2Q9H1B5 865 aa19.68■□□□□ 0.74
PRDM2-209ENST00000491134 PLXNA4Q9HCM2 1894 aa19.68■□□□□ 0.74
PRDM2-209ENST00000491134 VWA8A3KMH1 1905 aa19.68■□□□□ 0.74
PRDM2-209ENST00000491134 MYO9BQ13459 2157 aa19.67■□□□□ 0.74
PRDM2-209ENST00000491134 PODXLO00592 558 aa19.67■□□□□ 0.74
PRDM2-209ENST00000491134 LRRN2O75325 713 aa19.67■□□□□ 0.74
PRDM2-209ENST00000491134 ALDH2P05091 517 aa19.67■□□□□ 0.74
PRDM2-209ENST00000491134 ITGB3P05106 788 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms