RNA–Protein interactions for RNA: ENST00000491062.5

FXR1-220, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2 BASIC

Gene FXR1, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-220ENST00000491062 ATP2C2O75185 946 aa13.09□□□□□ -0.31
FXR1-220ENST00000491062 ATP6V1G2O95670 118 aa13.09□□□□□ -0.31
FXR1-220ENST00000491062 VIMP08670 466 aaKnown RBP13.09□□□□□ -0.31
FXR1-220ENST00000491062 DLATP10515 647 aaKnown RBP13.09□□□□□ -0.31
FXR1-220ENST00000491062 IVDP26440 423 aa13.09□□□□□ -0.31
FXR1-220ENST00000491062 SLCO1A2P46721 670 aa13.09□□□□□ -0.31
FXR1-220ENST00000491062 SNRNP35Q16560 246 aaKnown RBP13.09□□□□□ -0.31
FXR1-220ENST00000491062 SGO2Q562F6 1265 aa13.09□□□□□ -0.31
FXR1-220ENST00000491062 STYK1Q6J9G0 422 aa13.09□□□□□ -0.31
FXR1-220ENST00000491062 VSTM1Q6UX27 236 aa13.09□□□□□ -0.31
FXR1-220ENST00000491062 MAP4K3Q8IVH8 894 aa13.09□□□□□ -0.31
FXR1-220ENST00000491062 CCDC63Q8NA47 563 aa13.09□□□□□ -0.31
FXR1-220ENST00000491062 UHMK1Q8TAS1 419 aaKnown RBP13.09□□□□□ -0.31
FXR1-220ENST00000491062 GRK7Q8WTQ7 553 aa13.09□□□□□ -0.31
FXR1-220ENST00000491062 KIFAP3Q92845 792 aa13.09□□□□□ -0.31
FXR1-220ENST00000491062 PRMT6Q96LA8 375 aaPredicted RBP13.09□□□□□ -0.31
FXR1-220ENST00000491062 ELAC2Q9BQ52 826 aaKnown RBP13.09□□□□□ -0.31
FXR1-220ENST00000491062 LGALS13Q9UHV8 139 aa13.09□□□□□ -0.31
FXR1-220ENST00000491062 CLDN3O15551 220 aa13.09□□□□□ -0.31
FXR1-220ENST00000491062 SORBS3O60504 671 aa13.09□□□□□ -0.31
FXR1-220ENST00000491062 ICAM1P05362 532 aa13.09□□□□□ -0.31
FXR1-220ENST00000491062 MAP2K1Q02750 393 aaPredicted RBP13.09□□□□□ -0.31
FXR1-220ENST00000491062 PTP4A2Q12974 167 aa13.09□□□□□ -0.31
FXR1-220ENST00000491062 TKFCQ3LXA3 575 aa13.09□□□□□ -0.31
FXR1-220ENST00000491062 PCNX4Q63HM2 1172 aa13.09□□□□□ -0.31
FXR1-220ENST00000491062 ENOSF1Q7L5Y1 443 aa13.09□□□□□ -0.31
FXR1-220ENST00000491062 MAEAQ7L5Y9 396 aa13.09□□□□□ -0.31
FXR1-220ENST00000491062 CBWD2Q8IUF1 395 aa13.09□□□□□ -0.31
FXR1-220ENST00000491062 C4orf19Q8IY42 314 aa13.09□□□□□ -0.31
FXR1-220ENST00000491062 PARD3BQ8TEW8 1205 aa13.09□□□□□ -0.31
FXR1-220ENST00000491062 C7orf43Q8WVR3 580 aa13.09□□□□□ -0.31
FXR1-220ENST00000491062 FBXL18Q96ME1 805 aa13.09□□□□□ -0.31
FXR1-220ENST00000491062 DDX23Q9BUQ8 820 aaKnown RBP13.09□□□□□ -0.31
FXR1-220ENST00000491062 CXorf56Q9H5V9 222 aa13.09□□□□□ -0.31
FXR1-220ENST00000491062 TMOD2Q9NZR1 351 aa13.09□□□□□ -0.31
FXR1-220ENST00000491062 COL20A1Q9P218 1284 aa13.09□□□□□ -0.31
FXR1-220ENST00000491062 USP15Q9Y4E8 981 aaPredicted RBP13.09□□□□□ -0.31
FXR1-220ENST00000491062 ASTN2O75129 1339 aaPredicted RBP13.08□□□□□ -0.31
FXR1-220ENST00000491062 BRWD3Q6RI45 1802 aa13.08□□□□□ -0.32
FXR1-220ENST00000491062 O00370 1275 aa13.08□□□□□ -0.32
FXR1-220ENST00000491062 SLC16A4O15374 487 aa13.08□□□□□ -0.32
FXR1-220ENST00000491062 ZC3H11AO75152 810 aaKnown RBP eCLIP13.08□□□□□ -0.32
FXR1-220ENST00000491062 TTC4O95801 387 aa13.08□□□□□ -0.32
FXR1-220ENST00000491062 MYBL1P10243 752 aa13.08□□□□□ -0.32
FXR1-220ENST00000491062 ADSSP30520 456 aa13.08□□□□□ -0.32
FXR1-220ENST00000491062 YWHABP31946 246 aaKnown RBP13.08□□□□□ -0.32
FXR1-220ENST00000491062 SLC1A1P43005 524 aa13.08□□□□□ -0.32
FXR1-220ENST00000491062 IFNAR2P48551 515 aa13.08□□□□□ -0.32
FXR1-220ENST00000491062 CENPCQ03188 943 aa13.08□□□□□ -0.32
FXR1-220ENST00000491062 SPP2Q13103 211 aa13.08□□□□□ -0.32
FXR1-220ENST00000491062 GALNTL6Q49A17 601 aa13.08□□□□□ -0.32
FXR1-220ENST00000491062 CRELD2Q6UXH1 353 aaPredicted RBP13.08□□□□□ -0.32
FXR1-220ENST00000491062 CCDC25Q86WR0 208 aa13.08□□□□□ -0.32
FXR1-220ENST00000491062 RELL1Q8IUW5 271 aa13.08□□□□□ -0.32
FXR1-220ENST00000491062 GBP7Q8N8V2 638 aaPredicted RBP13.08□□□□□ -0.32
FXR1-220ENST00000491062 FBXL13Q8NEE6 735 aa13.08□□□□□ -0.32
FXR1-220ENST00000491062 IL31RAQ8NI17 732 aa13.08□□□□□ -0.32
FXR1-220ENST00000491062 FAM151AQ8WW52 585 aa13.08□□□□□ -0.32
FXR1-220ENST00000491062 ARHGEF2Q92974 986 aaKnown RBP13.08□□□□□ -0.32
FXR1-220ENST00000491062 ZNF622Q969S3 477 aaKnown RBP eCLIP13.08□□□□□ -0.327e-7■□□□□ 9.9
FXR1-220ENST00000491062 TRIM11Q96F44 468 aa13.08□□□□□ -0.32
FXR1-220ENST00000491062 FAM81BQ96LP2 452 aa13.08□□□□□ -0.32
FXR1-220ENST00000491062 MFSD14AQ96MC6 490 aa13.08□□□□□ -0.32
FXR1-220ENST00000491062 PLCD4Q9BRC7 762 aa13.08□□□□□ -0.32
FXR1-220ENST00000491062 DCLK3Q9C098 648 aa13.08□□□□□ -0.32
FXR1-220ENST00000491062 ATP6V0A4Q9HBG4 840 aa13.08□□□□□ -0.32
FXR1-220ENST00000491062 ACP6Q9NPH0 428 aa13.08□□□□□ -0.32
FXR1-220ENST00000491062 ANKEF1Q9NU02 776 aa13.08□□□□□ -0.32
FXR1-220ENST00000491062 ABCF3Q9NUQ8 709 aa13.08□□□□□ -0.32
FXR1-220ENST00000491062 ASIC3Q9UHC3 531 aa13.08□□□□□ -0.32
FXR1-220ENST00000491062 TBX20Q9UMR3 447 aa13.08□□□□□ -0.32
FXR1-220ENST00000491062 ADGRA3Q8IWK6 1321 aa13.08□□□□□ -0.32
FXR1-220ENST00000491062 TMEM120BA0PK00 339 aa13.07□□□□□ -0.32
FXR1-220ENST00000491062 GAS8O95995 478 aa13.07□□□□□ -0.32
FXR1-220ENST00000491062 EZRP15311 586 aaKnown RBP13.07□□□□□ -0.32
FXR1-220ENST00000491062 MAPK4P31152 587 aa13.07□□□□□ -0.32
FXR1-220ENST00000491062 CHKAP35790 457 aa13.07□□□□□ -0.32
FXR1-220ENST00000491062 PEX3P56589 373 aa13.07□□□□□ -0.32
FXR1-220ENST00000491062 GCNT1Q02742 428 aa13.07□□□□□ -0.32
FXR1-220ENST00000491062 LONRF1Q17RB8 773 aa13.07□□□□□ -0.32
FXR1-220ENST00000491062 CCDC38Q502W7 563 aa13.07□□□□□ -0.32
FXR1-220ENST00000491062 HIBCHQ6NVY1 386 aaPredicted RBP13.07□□□□□ -0.32
FXR1-220ENST00000491062 NSMFQ6X4W1 530 aa13.07□□□□□ -0.32
FXR1-220ENST00000491062 TMEM161BQ8NDZ6 487 aa13.07□□□□□ -0.32
FXR1-220ENST00000491062 C1orf54Q8WWF1 131 aa13.07□□□□□ -0.32
FXR1-220ENST00000491062 CKAP2Q8WWK9 683 aa13.07□□□□□ -0.32
FXR1-220ENST00000491062 CLEC4DQ8WXI8 215 aa13.07□□□□□ -0.32
FXR1-220ENST00000491062 POP1Q99575 1024 aaKnown RBP13.07□□□□□ -0.32
FXR1-220ENST00000491062 NOD2Q9HC29 1040 aa13.07□□□□□ -0.32
FXR1-220ENST00000491062 TBC1D22BQ9NU19 505 aa13.07□□□□□ -0.32
FXR1-220ENST00000491062 ANAPC7Q9UJX3 599 aa13.07□□□□□ -0.32
FXR1-220ENST00000491062 NEU2Q9Y3R4 380 aa13.07□□□□□ -0.32
FXR1-220ENST00000491062 CNTNAP1P78357 1384 aa13.07□□□□□ -0.32
FXR1-220ENST00000491062 GOLGA8IPA6NC78 632 aa13.07□□□□□ -0.32
FXR1-220ENST00000491062 GOLGA8JA6NMD2 632 aa13.07□□□□□ -0.32
FXR1-220ENST00000491062 SUN1O94901 812 aa13.07□□□□□ -0.32
FXR1-220ENST00000491062 GJB6O95452 261 aa13.07□□□□□ -0.32
FXR1-220ENST00000491062 ACSL3O95573 720 aa13.07□□□□□ -0.32
FXR1-220ENST00000491062 MMP10P09238 476 aa13.07□□□□□ -0.32
FXR1-220ENST00000491062 UNGP13051 313 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms