RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 PDE11AQ9HCR9 933 aa17.14■□□□□ 0.33
TRA2A-208ENST00000490942 MARCH5Q9NX47 278 aa17.14■□□□□ 0.33
TRA2A-208ENST00000490942 HCSTQ9UBK5 93 aa17.14■□□□□ 0.33
TRA2A-208ENST00000490942 ANO9A1A5B4 782 aa17.13■□□□□ 0.33
TRA2A-208ENST00000490942 TRIM49BA6NDI0 452 aa17.13■□□□□ 0.33
TRA2A-208ENST00000490942 TRAPPC3O43617 180 aa17.13■□□□□ 0.33
TRA2A-208ENST00000490942 CCDC192P0DO97 292 aa17.13■□□□□ 0.33
TRA2A-208ENST00000490942 KRT13P13646 458 aa17.13■□□□□ 0.33
TRA2A-208ENST00000490942 PRKCSHP14314 528 aaPredicted RBP17.13■□□□□ 0.33
TRA2A-208ENST00000490942 MARSP56192 900 aaKnown RBP17.13■□□□□ 0.33
TRA2A-208ENST00000490942 SOX4Q06945 474 aaPredicted RBP17.13■□□□□ 0.33
TRA2A-208ENST00000490942 BFSP1Q12934 665 aa17.13■□□□□ 0.33
TRA2A-208ENST00000490942 GPM6BQ13491 265 aa17.13■□□□□ 0.33
TRA2A-208ENST00000490942 FRMD5Q7Z6J6 570 aa17.13■□□□□ 0.33
TRA2A-208ENST00000490942 RNF168Q8IYW5 571 aaPredicted RBP17.13■□□□□ 0.33
TRA2A-208ENST00000490942 RDH13Q8NBN7 331 aa17.13■□□□□ 0.33
TRA2A-208ENST00000490942 NOC3LQ8WTT2 800 aaKnown RBP17.13■□□□□ 0.33
TRA2A-208ENST00000490942 ANKRD36BP1Q96IX9 119 aa17.13■□□□□ 0.33
TRA2A-208ENST00000490942 NAT10Q9H0A0 1025 aaKnown RBP17.13■□□□□ 0.33
TRA2A-208ENST00000490942 TUBGCP4Q9UGJ1 667 aa17.13■□□□□ 0.33
TRA2A-208ENST00000490942 ADAM28Q9UKQ2 775 aa17.13■□□□□ 0.33
TRA2A-208ENST00000490942 ITGA11Q9UKX5 1188 aa17.13■□□□□ 0.33
TRA2A-208ENST00000490942 PDCD11Q14690 1871 aaKnown RBP17.13■□□□□ 0.33
TRA2A-208ENST00000490942 CASTOR2A6NHX0 329 aa17.12■□□□□ 0.33
TRA2A-208ENST00000490942 PODXLO00592 558 aa17.12■□□□□ 0.33
TRA2A-208ENST00000490942 PIRO00625 290 aa17.12■□□□□ 0.33
TRA2A-208ENST00000490942 STX10O60499 249 aa17.12■□□□□ 0.33
TRA2A-208ENST00000490942 B3GAT3O94766 335 aa17.12■□□□□ 0.33
TRA2A-208ENST00000490942 CAVIN2O95810 425 aa17.12■□□□□ 0.33
TRA2A-208ENST00000490942 TNNC2P02585 160 aa17.12■□□□□ 0.33
TRA2A-208ENST00000490942 ITGB1P05556 798 aa17.12■□□□□ 0.33
TRA2A-208ENST00000490942 TMEM191BP0C7N4 346 aa17.12■□□□□ 0.33
TRA2A-208ENST00000490942 GTF2H1P32780 548 aa17.12■□□□□ 0.33
TRA2A-208ENST00000490942 PNPLA4P41247 253 aa17.12■□□□□ 0.33
TRA2A-208ENST00000490942 CLCNKBP51801 687 aa17.12■□□□□ 0.33
TRA2A-208ENST00000490942 VAMP7P51809 220 aa17.12■□□□□ 0.33
TRA2A-208ENST00000490942 WNT7BP56706 349 aa17.12■□□□□ 0.33
TRA2A-208ENST00000490942 BMS1Q14692 1282 aaKnown RBP17.12■□□□□ 0.33
TRA2A-208ENST00000490942 PTPROQ16827 1216 aa17.12■□□□□ 0.33
TRA2A-208ENST00000490942 ENOX1Q8TC92 643 aaKnown RBP17.12■□□□□ 0.33
TRA2A-208ENST00000490942 SPPL3Q8TCT6 385 aa17.12■□□□□ 0.33
TRA2A-208ENST00000490942 C18orf25Q96B23 403 aaPredicted RBP17.12■□□□□ 0.33
TRA2A-208ENST00000490942 CCDC127Q96BQ5 260 aa17.12■□□□□ 0.33
TRA2A-208ENST00000490942 GZF1Q9H116 711 aaPredicted RBP17.12■□□□□ 0.33
TRA2A-208ENST00000490942 DPP3Q9NY33 737 aa17.12■□□□□ 0.33
TRA2A-208ENST00000490942 MTUS1Q9ULD2 1270 aa17.12■□□□□ 0.33
TRA2A-208ENST00000490942 SF3B1O75533 1304 aaKnown RBP eCLIP17.12■□□□□ 0.332e-7■■■■■ 28.2
TRA2A-208ENST00000490942 NLRC5Q86WI3 1866 aa17.12■□□□□ 0.33
TRA2A-208ENST00000490942 LPXNO60711 386 aa17.11■□□□□ 0.33
TRA2A-208ENST00000490942 TADA2AO75478 443 aa17.11■□□□□ 0.33
TRA2A-208ENST00000490942 DLATP10515 647 aaKnown RBP17.11■□□□□ 0.33
TRA2A-208ENST00000490942 TNNI1P19237 187 aa17.11■□□□□ 0.33
TRA2A-208ENST00000490942 AARSP49588 968 aaKnown RBP eCLIP17.11■□□□□ 0.33
TRA2A-208ENST00000490942 TFAMQ00059 246 aaKnown RBP17.11■□□□□ 0.33
TRA2A-208ENST00000490942 TYRO3Q06418 890 aa17.11■□□□□ 0.33
TRA2A-208ENST00000490942 SPAG1Q07617 926 aa17.11■□□□□ 0.33
TRA2A-208ENST00000490942 GRIN2CQ14957 1233 aa17.11■□□□□ 0.33
TRA2A-208ENST00000490942 C9orf57Q5W0N0 161 aa17.11■□□□□ 0.33
TRA2A-208ENST00000490942 SPRED2Q7Z698 418 aa17.11■□□□□ 0.33
TRA2A-208ENST00000490942 LRRC52Q8N7C0 313 aa17.11■□□□□ 0.33
TRA2A-208ENST00000490942 MED15Q96RN5 788 aa17.11■□□□□ 0.33
TRA2A-208ENST00000490942 BPIFA3Q9BQP9 254 aa17.11■□□□□ 0.33
TRA2A-208ENST00000490942 NGRNQ9NPE2 291 aaKnown RBP17.11■□□□□ 0.33
TRA2A-208ENST00000490942 ARMCX3Q9UH62 379 aaPredicted RBP17.11■□□□□ 0.33
TRA2A-208ENST00000490942 SSX2IPQ9Y2D8 614 aa17.11■□□□□ 0.33
TRA2A-208ENST00000490942 PRG3Q9Y2Y8 225 aaPredicted RBP17.11■□□□□ 0.33
TRA2A-208ENST00000490942 IRAK3Q9Y616 596 aa17.11■□□□□ 0.33
TRA2A-208ENST00000490942 KIAA1671Q9BY89 1806 aa17.11■□□□□ 0.33
TRA2A-208ENST00000490942 ANK1P16157 1881 aa17.11■□□□□ 0.33
TRA2A-208ENST00000490942 TRIP11Q15643 1979 aa17.1■□□□□ 0.33
TRA2A-208ENST00000490942 ARHGEF37A1IGU5 675 aa17.1■□□□□ 0.33
TRA2A-208ENST00000490942 LRRIQ3A6PVS8 624 aaPredicted RBP17.1■□□□□ 0.33
TRA2A-208ENST00000490942 KIF4AO95239 1232 aa17.1■□□□□ 0.33
TRA2A-208ENST00000490942 SOD2P04179 222 aa17.1■□□□□ 0.33
TRA2A-208ENST00000490942 PBX3P40426 434 aa17.1■□□□□ 0.33
TRA2A-208ENST00000490942 STX17P56962 302 aa17.1■□□□□ 0.33
TRA2A-208ENST00000490942 RBP5P82980 135 aa17.1■□□□□ 0.33
TRA2A-208ENST00000490942 FUT10Q6P4F1 479 aa17.1■□□□□ 0.33
TRA2A-208ENST00000490942 TMEM173Q86WV6 379 aaPredicted RBP17.1■□□□□ 0.33
TRA2A-208ENST00000490942 FAM114A1Q8IWE2 563 aa17.1■□□□□ 0.33
TRA2A-208ENST00000490942 C1orf127Q8N9H9 656 aa17.1■□□□□ 0.33
TRA2A-208ENST00000490942 CXorf38Q8TB03 319 aa17.1■□□□□ 0.33
TRA2A-208ENST00000490942 MRPL38Q96DV4 380 aaKnown RBP17.1■□□□□ 0.33
TRA2A-208ENST00000490942 ZNF560Q96MR9 790 aa17.1■□□□□ 0.33
TRA2A-208ENST00000490942 PAAF1Q9BRP4 392 aa17.1■□□□□ 0.33
TRA2A-208ENST00000490942 FUCA2Q9BTY2 467 aa17.1■□□□□ 0.33
TRA2A-208ENST00000490942 SRRTQ9BXP5 876 aaKnown RBP17.1■□□□□ 0.33
TRA2A-208ENST00000490942 MTMR12Q9C0I1 747 aa17.1■□□□□ 0.33
TRA2A-208ENST00000490942 THAP9Q9H5L6 903 aa17.1■□□□□ 0.33
TRA2A-208ENST00000490942 CERS4Q9HA82 394 aa17.1■□□□□ 0.33
TRA2A-208ENST00000490942 GOLGA2P5Q9HBQ8 144 aa17.1■□□□□ 0.33
TRA2A-208ENST00000490942 EPOPA6NHQ4 379 aa17.09■□□□□ 0.33
TRA2A-208ENST00000490942 NT5C1B-RDH14C9J2C7 533 aa17.09■□□□□ 0.33
TRA2A-208ENST00000490942 SYN3O14994 580 aa17.09■□□□□ 0.33
TRA2A-208ENST00000490942 GRM6O15303 877 aa17.09■□□□□ 0.33
TRA2A-208ENST00000490942 STAU1O95793 577 aaKnown RBP17.09■□□□□ 0.33
TRA2A-208ENST00000490942 ZACNQ401N2 412 aa17.09■□□□□ 0.33
TRA2A-208ENST00000490942 PDXDC1Q6P996 788 aa17.09■□□□□ 0.33
TRA2A-208ENST00000490942 CD300LGQ6UXG3 332 aa17.09■□□□□ 0.33
TRA2A-208ENST00000490942 C15orf39Q6ZRI6 1047 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms