RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 OR1D2P34982 312 aa34.19■■■■□ 3.06
LDB1-204ENST00000490751 SPAG1Q07617 926 aa34.19■■■■□ 3.06
LDB1-204ENST00000490751 KYAT1Q16773 422 aa34.19■■■■□ 3.06
LDB1-204ENST00000490751 ZC2HC1CQ53FD0 456 aaPredicted RBP34.19■■■■□ 3.06
LDB1-204ENST00000490751 ZBTB41Q5SVQ8 909 aa34.19■■■■□ 3.06
LDB1-204ENST00000490751 LIN9Q5TKA1 542 aa34.19■■■■□ 3.06
LDB1-204ENST00000490751 SLC39A4Q6P5W5 647 aa34.19■■■■□ 3.06
LDB1-204ENST00000490751 ANKS3Q6ZW76 656 aa34.19■■■■□ 3.06
LDB1-204ENST00000490751 SFR1Q86XK3 245 aa34.19■■■■□ 3.06
LDB1-204ENST00000490751 LINC00301Q8NCQ3 95 aa34.19■■■■□ 3.06
LDB1-204ENST00000490751 PBXIP1Q96AQ6 731 aa34.19■■■■□ 3.06
LDB1-204ENST00000490751 ARIH1Q9Y4X5 557 aaPredicted RBP34.19■■■■□ 3.06
LDB1-204ENST00000490751 FAM189A1O60320 539 aa34.18■■■■□ 3.06
LDB1-204ENST00000490751 STAT6P42226 847 aa34.18■■■■□ 3.06
LDB1-204ENST00000490751 PPP2R3AQ06190 1150 aa34.18■■■■□ 3.06
LDB1-204ENST00000490751 RAB33AQ14088 237 aa34.18■■■■□ 3.06
LDB1-204ENST00000490751 FOXD4L5Q5VV16 416 aaPredicted RBP34.18■■■■□ 3.06
LDB1-204ENST00000490751 RSPO2Q6UXX9 243 aaPredicted RBP34.18■■■■□ 3.06
LDB1-204ENST00000490751 FOXD4L4Q8WXT5 416 aaPredicted RBP34.18■■■■□ 3.06
LDB1-204ENST00000490751 STAMQ92783 540 aa34.18■■■■□ 3.06
LDB1-204ENST00000490751 ZNF396Q96N95 335 aaPredicted RBP34.18■■■■□ 3.06
LDB1-204ENST00000490751 MSTO1Q9BUK6 570 aa34.18■■■■□ 3.06
LDB1-204ENST00000490751 PANK2Q9BZ23 570 aa34.18■■■■□ 3.06
LDB1-204ENST00000490751 ST6GALNAC4Q9H4F1 302 aa34.18■■■■□ 3.06
LDB1-204ENST00000490751 TFIP11Q9UBB9 837 aaKnown RBP34.18■■■■□ 3.06
LDB1-204ENST00000490751 BACE2Q9Y5Z0 518 aa34.18■■■■□ 3.06
LDB1-204ENST00000490751 CDY1Q9Y6F8 540 aa34.18■■■■□ 3.06
LDB1-204ENST00000490751 A0A087X0B3 334 aa34.17■■■■□ 3.06
LDB1-204ENST00000490751 A0A0B4J269 797 aa34.17■■■■□ 3.06
LDB1-204ENST00000490751 UBALD2Q8IYN6 164 aa34.17■■■■□ 3.06
LDB1-204ENST00000490751 KIF12Q96FN5 646 aa34.17■■■■□ 3.06
LDB1-204ENST00000490751 ASIC4Q96FT7 647 aa34.17■■■■□ 3.06
LDB1-204ENST00000490751 N4BP1O75113 896 aaKnown RBP34.16■■■■□ 3.06
LDB1-204ENST00000490751 C8AP07357 584 aa34.16■■■■□ 3.06
LDB1-204ENST00000490751 ENOX2Q16206 610 aaKnown RBP34.16■■■■□ 3.06
LDB1-204ENST00000490751 VARS2Q5ST30 1063 aaKnown RBP34.16■■■■□ 3.06
LDB1-204ENST00000490751 DNAJC19Q96DA6 116 aa34.16■■■■□ 3.06
LDB1-204ENST00000490751 SMOC2Q9H3U7 446 aa34.16■■■■□ 3.06
LDB1-204ENST00000490751 RPF1Q9H9Y2 349 aaKnown RBP34.16■■■■□ 3.06
LDB1-204ENST00000490751 LACTBL1A8MY62 500 aa34.15■■■■□ 3.06
LDB1-204ENST00000490751 SYN3O14994 580 aa34.15■■■■□ 3.06
LDB1-204ENST00000490751 SPTLC2O15270 562 aa34.15■■■■□ 3.06
LDB1-204ENST00000490751 GBP2P32456 591 aaPredicted RBP34.15■■■■□ 3.06
LDB1-204ENST00000490751 MCM4P33991 863 aa34.15■■■■□ 3.06
LDB1-204ENST00000490751 PPM1LQ5SGD2 360 aa34.15■■■■□ 3.06
LDB1-204ENST00000490751 ZNF720Q7Z2F6 126 aa34.15■■■■□ 3.06
LDB1-204ENST00000490751 TMEM130Q8N3G9 435 aa34.15■■■■□ 3.06
LDB1-204ENST00000490751 SEL1LQ9UBV2 794 aa34.15■■■■□ 3.06
LDB1-204ENST00000490751 ZNF318Q5VUA4 2279 aa34.14■■■■□ 3.06
LDB1-204ENST00000490751 ANKRD63C9JTQ0 380 aa34.14■■■■□ 3.06
LDB1-204ENST00000490751 HNRNPA1P09651 372 aaKnown RBP eCLIP34.14■■■■□ 3.06
LDB1-204ENST00000490751 PDILTQ8N807 584 aa34.14■■■■□ 3.06
LDB1-204ENST00000490751 UBQLN1Q9UMX0 589 aaKnown RBP34.14■■■■□ 3.06
LDB1-204ENST00000490751 DOCK8Q8NF50 2099 aa34.13■■■■□ 3.05
LDB1-204ENST00000490751 TISP43B9A030 160 aa34.13■■■■□ 3.05
LDB1-204ENST00000490751 PPP6R2O75170 966 aa34.13■■■■□ 3.05
LDB1-204ENST00000490751 GAP43P17677 238 aa34.13■■■■□ 3.05
LDB1-204ENST00000490751 PLA2G5P39877 138 aa34.13■■■■□ 3.05
LDB1-204ENST00000490751 ZBTB6Q15916 424 aa34.13■■■■□ 3.05
LDB1-204ENST00000490751 AXDND1Q5T1B0 1012 aaPredicted RBP34.13■■■■□ 3.05
LDB1-204ENST00000490751 SLC7A14Q8TBB6 771 aa34.13■■■■□ 3.05
LDB1-204ENST00000490751 HVCN1Q96D96 273 aa34.13■■■■□ 3.05
LDB1-204ENST00000490751 SUSD3Q96L08 255 aa34.13■■■■□ 3.05
LDB1-204ENST00000490751 MRPL44Q9H9J2 332 aaKnown RBP34.13■■■■□ 3.05
LDB1-204ENST00000490751 CPSF3Q9UKF6 684 aaKnown RBP34.13■■■■□ 3.05
LDB1-204ENST00000490751 PPP1R37O75864 691 aa34.12■■■■□ 3.05
LDB1-204ENST00000490751 YEATS4O95619 227 aa34.12■■■■□ 3.05
LDB1-204ENST00000490751 ZSCAN22P10073 491 aaPredicted RBP34.12■■■■□ 3.05
LDB1-204ENST00000490751 PDIA4P13667 645 aaKnown RBP34.12■■■■□ 3.05
LDB1-204ENST00000490751 CYP3A5P20815 502 aa34.12■■■■□ 3.05
LDB1-204ENST00000490751 LRPAP1P30533 357 aa34.12■■■■□ 3.05
LDB1-204ENST00000490751 HOXA9P31269 272 aa34.12■■■■□ 3.05
LDB1-204ENST00000490751 SUGP1Q8IWZ8 645 aaKnown RBP34.12■■■■□ 3.05
LDB1-204ENST00000490751 FAM122AQ96E09 287 aa34.12■■■■□ 3.05
LDB1-204ENST00000490751 FAM212AQ96EL1 285 aa34.12■■■■□ 3.05
LDB1-204ENST00000490751 MYADMQ96S97 322 aa34.12■■■■□ 3.05
LDB1-204ENST00000490751 TBC1D7Q9P0N9 293 aa34.12■■■■□ 3.05
LDB1-204ENST00000490751 GTF3C5Q9Y5Q8 519 aaPredicted RBP34.12■■■■□ 3.05
LDB1-204ENST00000490751 DOCK6Q96HP0 2047 aa34.12■■■■□ 3.05
LDB1-204ENST00000490751 ANK1P16157 1881 aa34.12■■■■□ 3.05
LDB1-204ENST00000490751 XPOTO43592 962 aaKnown RBP34.11■■■■□ 3.05
LDB1-204ENST00000490751 ADRB2P07550 413 aa34.11■■■■□ 3.05
LDB1-204ENST00000490751 IDEP14735 1019 aa34.11■■■■□ 3.05
LDB1-204ENST00000490751 FOXD4L6Q3SYB3 417 aaPredicted RBP34.11■■■■□ 3.05
LDB1-204ENST00000490751 ADALQ6DHV7 355 aa34.11■■■■□ 3.05
LDB1-204ENST00000490751 SLFN12LQ6IEE8 588 aa34.11■■■■□ 3.05
LDB1-204ENST00000490751 SLC8B1Q6J4K2 584 aa34.11■■■■□ 3.05
LDB1-204ENST00000490751 FOXD4L3Q6VB84 417 aaPredicted RBP34.11■■■■□ 3.05
LDB1-204ENST00000490751 GET4Q7L5D6 327 aaPredicted RBP34.11■■■■□ 3.05
LDB1-204ENST00000490751 FBXL6Q8N531 539 aa34.11■■■■□ 3.05
LDB1-204ENST00000490751 IKZF4Q9H2S9 585 aa34.11■■■■□ 3.05
LDB1-204ENST00000490751 CCL16O15467 120 aa34.1■■■■□ 3.05
LDB1-204ENST00000490751 F13A1P00488 732 aa34.1■■■■□ 3.05
LDB1-204ENST00000490751 GUCY2FP51841 1108 aa34.1■■■■□ 3.05
LDB1-204ENST00000490751 ROR1Q01973 937 aa34.1■■■■□ 3.05
LDB1-204ENST00000490751 GRASPQ7Z6J2 395 aaPredicted RBP34.1■■■■□ 3.05
LDB1-204ENST00000490751 SPRYD3Q8NCJ5 442 aa34.1■■■■□ 3.05
LDB1-204ENST00000490751 TSPAN18Q96SJ8 248 aa34.1■■■■□ 3.05
LDB1-204ENST00000490751 STRA6Q9BX79 667 aa34.1■■■■□ 3.05
LDB1-204ENST00000490751 KCNK12Q9HB15 430 aa34.1■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms