RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	TMEM132D	Q14C87	1099 aa		20.17	■□□□□ 0.82
C4A-256	ENST00000490663	BMT2	Q1RMZ1	405 aa		20.17	■□□□□ 0.82
C4A-256	ENST00000490663	LMBRD2	Q68DH5	695 aa	Predicted RBP	20.17	■□□□□ 0.82
C4A-256	ENST00000490663	PDE12	Q6L8Q7	609 aa	Known RBP	20.17	■□□□□ 0.82
C4A-256	ENST00000490663	CBWD2	Q8IUF1	395 aa		20.17	■□□□□ 0.82
C4A-256	ENST00000490663	GPD1L	Q8N335	351 aa		20.17	■□□□□ 0.82
C4A-256	ENST00000490663	EFHB	Q8N7U6	833 aa		20.17	■□□□□ 0.82
C4A-256	ENST00000490663	FEZF2	Q8TBJ5	459 aa		20.17	■□□□□ 0.82
C4A-256	ENST00000490663	RIN2	Q8WYP3	895 aa	Predicted RBP	20.17	■□□□□ 0.82
C4A-256	ENST00000490663	PLEKHA5	Q9HAU0	1116 aa		20.17	■□□□□ 0.82
C4A-256	ENST00000490663	RBAK	Q9NYW8	714 aa	Predicted RBP	20.17	■□□□□ 0.82
C4A-256	ENST00000490663	HSPBP1	Q9NZL4	362 aa		20.17	■□□□□ 0.82
C4A-256	ENST00000490663	SF3B1	O75533	1304 aa	Known RBP eCLIP	20.17	■□□□□ 0.82
C4A-256	ENST00000490663	MYO10	Q9HD67	2058 aa		20.17	■□□□□ 0.82
C4A-256	ENST00000490663	NOTCH4	Q99466	2003 aa		20.16	■□□□□ 0.82
C4A-256	ENST00000490663	DOCK8	Q8NF50	2099 aa		20.16	■□□□□ 0.82
C4A-256	ENST00000490663	RHOBTB3	O94955	611 aa		20.16	■□□□□ 0.82
C4A-256	ENST00000490663	MYL1	P05976	194 aa		20.16	■□□□□ 0.82
C4A-256	ENST00000490663	ADRB2	P07550	413 aa		20.16	■□□□□ 0.82
C4A-256	ENST00000490663	CNP	P09543	421 aa	Known RBP	20.16	■□□□□ 0.82
C4A-256	ENST00000490663	EPCAM	P16422	314 aa		20.16	■□□□□ 0.82
C4A-256	ENST00000490663	TKT	P29401	623 aa	Known RBP	20.16	■□□□□ 0.82
C4A-256	ENST00000490663	COL19A1	Q14993	1142 aa		20.16	■□□□□ 0.82
C4A-256	ENST00000490663	ZBTB6	Q15916	424 aa		20.16	■□□□□ 0.82
C4A-256	ENST00000490663	KYAT1	Q16773	422 aa		20.16	■□□□□ 0.82
C4A-256	ENST00000490663	CTC1	Q2NKJ3	1217 aa		20.16	■□□□□ 0.82
C4A-256	ENST00000490663	SCARA3	Q6AZY7	606 aa		20.16	■□□□□ 0.82
C4A-256	ENST00000490663	ISM2	Q6H9L7	571 aa		20.16	■□□□□ 0.82
C4A-256	ENST00000490663	KIAA1841	Q6NSI8	718 aa		20.16	■□□□□ 0.82
C4A-256	ENST00000490663	BRSK2	Q8IWQ3	736 aa		20.16	■□□□□ 0.82
C4A-256	ENST00000490663	RDH13	Q8NBN7	331 aa		20.16	■□□□□ 0.82
C4A-256	ENST00000490663	UROC1	Q96N76	676 aa		20.16	■□□□□ 0.82
C4A-256	ENST00000490663	KLHL5	Q96PQ7	755 aa		20.16	■□□□□ 0.82
C4A-256	ENST00000490663	MRPL17	Q9NRX2	175 aa	Known RBP	20.16	■□□□□ 0.82
C4A-256	ENST00000490663	UBQLN1	Q9UMX0	589 aa	Known RBP	20.16	■□□□□ 0.82
C4A-256	ENST00000490663	COG5	Q9UP83	839 aa		20.16	■□□□□ 0.82
C4A-256	ENST00000490663	PTPRD	P23468	1912 aa		20.15	■□□□□ 0.82
C4A-256	ENST00000490663	EXTL3	O43909	919 aa		20.15	■□□□□ 0.82
C4A-256	ENST00000490663	LILRB3	O75022	631 aa		20.15	■□□□□ 0.82
C4A-256	ENST00000490663	DSG1	Q02413	1049 aa		20.15	■□□□□ 0.82
C4A-256	ENST00000490663	KNOP1	Q1ED39	458 aa	Known RBP	20.15	■□□□□ 0.82
C4A-256	ENST00000490663	USP41	Q3LFD5	358 aa		20.15	■□□□□ 0.82
C4A-256	ENST00000490663	KIAA0319	Q5VV43	1072 aa		20.15	■□□□□ 0.82
C4A-256	ENST00000490663	KANK3	Q6NY19	840 aa		20.15	■□□□□ 0.82
C4A-256	ENST00000490663	DCLRE1A	Q6PJP8	1040 aa		20.15	■□□□□ 0.82
C4A-256	ENST00000490663	CCDC47	Q96A33	483 aa	Known RBP	20.15	■□□□□ 0.82
C4A-256	ENST00000490663	PDE11A	Q9HCR9	933 aa		20.15	■□□□□ 0.82
C4A-256	ENST00000490663	CLEC1B	Q9P126	229 aa		20.15	■□□□□ 0.82
C4A-256	ENST00000490663	CDH22	Q9UJ99	828 aa		20.15	■□□□□ 0.82
C4A-256	ENST00000490663	PTPRJ	Q12913	1337 aa		20.15	■□□□□ 0.82
C4A-256	ENST00000490663	NCOR1	O75376	2440 aa		20.15	■□□□□ 0.82
C4A-256	ENST00000490663	TMEM189-UBE2V1	I3L0A0	370 aa		20.14	■□□□□ 0.81
C4A-256	ENST00000490663	KIN	O60870	393 aa	Known RBP	20.14	■□□□□ 0.81
C4A-256	ENST00000490663	MCM4	P33991	863 aa		20.14	■□□□□ 0.81
C4A-256	ENST00000490663	PSMD2	Q13200	908 aa		20.14	■□□□□ 0.81
C4A-256	ENST00000490663	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	20.14	■□□□□ 0.81
C4A-256	ENST00000490663	CHST7	Q9NS84	486 aa		20.14	■□□□□ 0.81
C4A-256	ENST00000490663	NUB1	Q9Y5A7	615 aa		20.14	■□□□□ 0.81
C4A-256	ENST00000490663	HCFC2	Q9Y5Z7	792 aa		20.14	■□□□□ 0.81
C4A-256	ENST00000490663	DENND4C	Q5VZ89	1909 aa		20.14	■□□□□ 0.81
C4A-256	ENST00000490663		A0A0C4DFX4	3053 aa		20.13	■□□□□ 0.81
C4A-256	ENST00000490663	TEX28	O15482	410 aa		20.13	■□□□□ 0.81
C4A-256	ENST00000490663	ADAM12	O43184	909 aa		20.13	■□□□□ 0.81
C4A-256	ENST00000490663	SPATA31D3	P0C874	917 aa		20.13	■□□□□ 0.81
C4A-256	ENST00000490663	MRPS5	P82675	430 aa	Known RBP	20.13	■□□□□ 0.81
C4A-256	ENST00000490663	TFAM	Q00059	246 aa	Known RBP	20.13	■□□□□ 0.81
C4A-256	ENST00000490663	KCNC3	Q14003	757 aa		20.13	■□□□□ 0.81
C4A-256	ENST00000490663	BMS1	Q14692	1282 aa	Known RBP	20.13	■□□□□ 0.81
C4A-256	ENST00000490663	KCNB1	Q14721	858 aa		20.13	■□□□□ 0.81
C4A-256	ENST00000490663	PSMD5	Q16401	504 aa		20.13	■□□□□ 0.81
C4A-256	ENST00000490663	SPATA1	Q5VX52	437 aa		20.13	■□□□□ 0.81
C4A-256	ENST00000490663	SPATA31D4	Q6ZUB0	917 aa		20.13	■□□□□ 0.81
C4A-256	ENST00000490663	HS2ST1	Q7LGA3	356 aa		20.13	■□□□□ 0.81
C4A-256	ENST00000490663	BEST2	Q8NFU1	509 aa		20.13	■□□□□ 0.81
C4A-256	ENST00000490663	DDX27	Q96GQ7	796 aa	Known RBP	20.13	■□□□□ 0.81
C4A-256	ENST00000490663	NECAB3	Q96P71	396 aa	Predicted RBP	20.13	■□□□□ 0.81
C4A-256	ENST00000490663	ASB2	Q96Q27	587 aa		20.13	■□□□□ 0.81
C4A-256	ENST00000490663	TTPAL	Q9BTX7	342 aa		20.13	■□□□□ 0.81
C4A-256	ENST00000490663	KCTD10	Q9H3F6	313 aa		20.13	■□□□□ 0.81
C4A-256	ENST00000490663	PCDHA5	Q9Y5H7	936 aa		20.13	■□□□□ 0.81
C4A-256	ENST00000490663	IRAK3	Q9Y616	596 aa		20.13	■□□□□ 0.81
C4A-256	ENST00000490663	ZNF638	Q14966	1978 aa	Known RBP	20.12	■□□□□ 0.81
C4A-256	ENST00000490663	OBSL1	O75147	1896 aa		20.12	■□□□□ 0.81
C4A-256	ENST00000490663	IL18RAP	O95256	599 aa		20.12	■□□□□ 0.81
C4A-256	ENST00000490663	LDHA	P00338	332 aa	Known RBP	20.12	■□□□□ 0.81
C4A-256	ENST00000490663	IL9	P15248	144 aa		20.12	■□□□□ 0.81
C4A-256	ENST00000490663	KLRC2	P26717	231 aa		20.12	■□□□□ 0.81
C4A-256	ENST00000490663	LRPAP1	P30533	357 aa		20.12	■□□□□ 0.81
C4A-256	ENST00000490663	UBE2H	P62256	183 aa		20.12	■□□□□ 0.81
C4A-256	ENST00000490663	PALB2	Q86YC2	1186 aa		20.12	■□□□□ 0.81
C4A-256	ENST00000490663	CD302	Q8IX05	232 aa		20.12	■□□□□ 0.81
C4A-256	ENST00000490663	C12orf76	Q8N812	135 aa	Predicted RBP	20.12	■□□□□ 0.81
C4A-256	ENST00000490663	SLC22A17	Q8WUG5	538 aa		20.12	■□□□□ 0.81
C4A-256	ENST00000490663	ATXN2L	Q8WWM7	1075 aa	Known RBP	20.12	■□□□□ 0.81
C4A-256	ENST00000490663	SMARCE1	Q969G3	411 aa		20.12	■□□□□ 0.81
C4A-256	ENST00000490663	MSLNL	Q96KJ4	702 aa		20.12	■□□□□ 0.81
C4A-256	ENST00000490663	TIGD1	Q96MW7	591 aa		20.12	■□□□□ 0.81
C4A-256	ENST00000490663	CDCA3	Q99618	268 aa	Predicted RBP	20.12	■□□□□ 0.81
C4A-256	ENST00000490663	ASB7	Q9H672	318 aa		20.12	■□□□□ 0.81
C4A-256	ENST00000490663	DPP3	Q9NY33	737 aa		20.12	■□□□□ 0.81

Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms