RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 TMEFF2Q9UIK5 374 aaPredicted RBP5.42□□□□□ -1.54
CSTF1-205ENST00000490539 NUB1Q9Y5A7 615 aa5.42□□□□□ -1.54
CSTF1-205ENST00000490539 NPFFR2Q9Y5X5 522 aa5.42□□□□□ -1.54
CSTF1-205ENST00000490539 MYH1P12882 1939 aa5.42□□□□□ -1.54
CSTF1-205ENST00000490539 MYH7P12883 1935 aa5.42□□□□□ -1.54
CSTF1-205ENST00000490539 RAD50Q92878 1312 aa5.42□□□□□ -1.54
CSTF1-205ENST00000490539 SALL3Q9BXA9 1300 aa5.42□□□□□ -1.54
CSTF1-205ENST00000490539 EPG5Q9HCE0 2579 aa5.42□□□□□ -1.54
CSTF1-205ENST00000490539 KMT2BQ9UMN6 2715 aaPredicted RBP5.41□□□□□ -1.54
CSTF1-205ENST00000490539 ZDBF2Q9HCK1 2354 aa5.41□□□□□ -1.54
CSTF1-205ENST00000490539 ERICH2A1L162 156 aa5.41□□□□□ -1.54
CSTF1-205ENST00000490539 TTLL1O95922 423 aa5.41□□□□□ -1.54
CSTF1-205ENST00000490539 ASGR2P07307 311 aa5.41□□□□□ -1.54
CSTF1-205ENST00000490539 HSP90AA1P07900 732 aaKnown RBP5.41□□□□□ -1.54
CSTF1-205ENST00000490539 HSPD1P10809 573 aaKnown RBP5.41□□□□□ -1.54
CSTF1-205ENST00000490539 FPR2P25090 351 aa5.41□□□□□ -1.54
CSTF1-205ENST00000490539 SHMT1P34896 483 aa5.41□□□□□ -1.54
CSTF1-205ENST00000490539 NUCB2P80303 420 aa5.41□□□□□ -1.54
CSTF1-205ENST00000490539 GABPAQ06546 454 aa5.41□□□□□ -1.54
CSTF1-205ENST00000490539 CYP4F3Q08477 520 aa5.41□□□□□ -1.54
CSTF1-205ENST00000490539 CCDC173Q0VFZ6 552 aa5.41□□□□□ -1.54
CSTF1-205ENST00000490539 IKQ13123 557 aaPredicted RBP5.41□□□□□ -1.54
CSTF1-205ENST00000490539 SEPT2Q15019 361 aa5.41□□□□□ -1.54
CSTF1-205ENST00000490539 SART3Q15020 963 aaKnown RBP5.41□□□□□ -1.54
CSTF1-205ENST00000490539 ALX1Q15699 326 aa5.41□□□□□ -1.54
CSTF1-205ENST00000490539 LONRF2Q1L5Z9 754 aa5.41□□□□□ -1.54
CSTF1-205ENST00000490539 KIZQ2M2Z5 673 aa5.41□□□□□ -1.54
CSTF1-205ENST00000490539 KLHL40Q2TBA0 621 aa5.41□□□□□ -1.54
CSTF1-205ENST00000490539 RRP12Q5JTH9 1297 aaKnown RBP5.41□□□□□ -1.54
CSTF1-205ENST00000490539 FBXO46Q6PJ61 603 aaPredicted RBP5.41□□□□□ -1.54
CSTF1-205ENST00000490539 ETV3LQ6ZN32 361 aa5.41□□□□□ -1.54
CSTF1-205ENST00000490539 RALYLQ86SE5 291 aaKnown RBP5.41□□□□□ -1.54
CSTF1-205ENST00000490539 GAS2L3Q86XJ1 694 aa5.41□□□□□ -1.54
CSTF1-205ENST00000490539 FAM129CQ86XR2 697 aa5.41□□□□□ -1.54
CSTF1-205ENST00000490539 MB21D1Q8N884 522 aa5.41□□□□□ -1.54
CSTF1-205ENST00000490539 CPA5Q8WXQ8 436 aa5.41□□□□□ -1.54
CSTF1-205ENST00000490539 ESR2Q92731 530 aa5.41□□□□□ -1.54
CSTF1-205ENST00000490539 MKL1Q969V6 931 aa5.41□□□□□ -1.54
CSTF1-205ENST00000490539 TRIM44Q96DX7 344 aaPredicted RBP5.41□□□□□ -1.54
CSTF1-205ENST00000490539 C1orf159Q96HA4 380 aa5.41□□□□□ -1.54
CSTF1-205ENST00000490539 FAM227BQ96M60 508 aa5.41□□□□□ -1.54
CSTF1-205ENST00000490539 NAP1L5Q96NT1 182 aaPredicted RBP5.41□□□□□ -1.54
CSTF1-205ENST00000490539 DEPDC7Q96QD5 511 aa5.41□□□□□ -1.54
CSTF1-205ENST00000490539 PPP1R9BQ96SB3 815 aa5.41□□□□□ -1.54
CSTF1-205ENST00000490539 PHF20Q9BVI0 1012 aa5.41□□□□□ -1.54
CSTF1-205ENST00000490539 KRT23Q9C075 422 aa5.41□□□□□ -1.54
CSTF1-205ENST00000490539 FBLN5Q9UBX5 448 aa5.41□□□□□ -1.54
CSTF1-205ENST00000490539 SYNPO2Q9UMS6 1093 aa5.41□□□□□ -1.54
CSTF1-205ENST00000490539 TRIM17Q9Y577 477 aa5.41□□□□□ -1.54
CSTF1-205ENST00000490539 HCFC2Q9Y5Z7 792 aa5.41□□□□□ -1.54
CSTF1-205ENST00000490539 ZMYM6O95789 1325 aa5.41□□□□□ -1.54
CSTF1-205ENST00000490539 MYO5AQ9Y4I1 1855 aaKnown RBP5.41□□□□□ -1.54
CSTF1-205ENST00000490539 FOCADQ5VW36 1801 aa5.4□□□□□ -1.54
CSTF1-205ENST00000490539 CYP2D7A0A087X1C5 515 aa5.4□□□□□ -1.54
CSTF1-205ENST00000490539 A0A0D9SFI3 127 aa5.4□□□□□ -1.54
CSTF1-205ENST00000490539 TNPO2O14787 897 aaKnown RBP5.4□□□□□ -1.54
CSTF1-205ENST00000490539 HGSO14964 777 aaPredicted RBP5.4□□□□□ -1.54
CSTF1-205ENST00000490539 RRP9O43818 475 aaKnown RBP5.4□□□□□ -1.54
CSTF1-205ENST00000490539 FLOT1O75955 427 aa5.4□□□□□ -1.54
CSTF1-205ENST00000490539 BAG4O95429 457 aaKnown RBP5.4□□□□□ -1.54
CSTF1-205ENST00000490539 FGAP02671 866 aa5.4□□□□□ -1.54
CSTF1-205ENST00000490539 CAPNS1P04632 268 aa5.4□□□□□ -1.54
CSTF1-205ENST00000490539 TPM2P07951 284 aa5.4□□□□□ -1.54
CSTF1-205ENST00000490539 CYP2C8P10632 490 aa5.4□□□□□ -1.54
CSTF1-205ENST00000490539 CYP2D6P10635 497 aa5.4□□□□□ -1.54
CSTF1-205ENST00000490539 GSPT1P15170 499 aaKnown RBP5.4□□□□□ -1.54
CSTF1-205ENST00000490539 NAT1P18440 290 aa5.4□□□□□ -1.54
CSTF1-205ENST00000490539 EN2P19622 333 aaPredicted RBP5.4□□□□□ -1.54
CSTF1-205ENST00000490539 PMLP29590 882 aa5.4□□□□□ -1.54
CSTF1-205ENST00000490539 MAPK4P31152 587 aa5.4□□□□□ -1.54
CSTF1-205ENST00000490539 HOXA7P31268 230 aaPredicted RBP5.4□□□□□ -1.54
CSTF1-205ENST00000490539 SUMO1P63165 101 aaKnown RBP5.4□□□□□ -1.54
CSTF1-205ENST00000490539 LACTBP83111 547 aaPredicted RBP5.4□□□□□ -1.54
CSTF1-205ENST00000490539 TFAP4Q01664 338 aa5.4□□□□□ -1.54
CSTF1-205ENST00000490539 CACNB2Q08289 660 aaPredicted RBP5.4□□□□□ -1.54
CSTF1-205ENST00000490539 COG2Q14746 738 aa5.4□□□□□ -1.54
CSTF1-205ENST00000490539 FAM110CQ1W6H9 321 aa5.4□□□□□ -1.54
CSTF1-205ENST00000490539 AKNAD1Q5T1N1 836 aa5.4□□□□□ -1.54
CSTF1-205ENST00000490539 STEAP3Q658P3 488 aa5.4□□□□□ -1.54
CSTF1-205ENST00000490539 CCDC129Q6ZRS4 1044 aa5.4□□□□□ -1.54
CSTF1-205ENST00000490539 SPATC1Q76KD6 591 aa5.4□□□□□ -1.54
CSTF1-205ENST00000490539 B3GNT8Q7Z7M8 397 aa5.4□□□□□ -1.54
CSTF1-205ENST00000490539 Q8N1Y9 231 aa5.4□□□□□ -1.54
CSTF1-205ENST00000490539 GPRC5AQ8NFJ5 357 aa5.4□□□□□ -1.54
CSTF1-205ENST00000490539 RAET1EQ8TD07 263 aa5.4□□□□□ -1.54
CSTF1-205ENST00000490539 DYNLL2Q96FJ2 89 aa5.4□□□□□ -1.54
CSTF1-205ENST00000490539 C20orf173Q96LM9 149 aa5.4□□□□□ -1.54
CSTF1-205ENST00000490539 DRC1Q96MC2 740 aa5.4□□□□□ -1.54
CSTF1-205ENST00000490539 SEC62Q99442 399 aaKnown RBP5.4□□□□□ -1.54
CSTF1-205ENST00000490539 PTPN18Q99952 460 aa5.4□□□□□ -1.54
CSTF1-205ENST00000490539 UBAC1Q9BSL1 405 aa5.4□□□□□ -1.54
CSTF1-205ENST00000490539 ALG1Q9BT22 464 aa5.4□□□□□ -1.54
CSTF1-205ENST00000490539 DNAJC18Q9H819 358 aa5.4□□□□□ -1.54
CSTF1-205ENST00000490539 SLC5A4Q9NY91 659 aa5.4□□□□□ -1.54
CSTF1-205ENST00000490539 CLIP2Q9UDT6 1046 aa5.4□□□□□ -1.54
CSTF1-205ENST00000490539 CPA4Q9UI42 421 aa5.4□□□□□ -1.54
CSTF1-205ENST00000490539 ANAPC4Q9UJX5 808 aa5.4□□□□□ -1.54
CSTF1-205ENST00000490539 STX8Q9UNK0 236 aa5.4□□□□□ -1.54
CSTF1-205ENST00000490539 PMF1-BGLAPU3KQ54 211 aa5.4□□□□□ -1.54
CSTF1-205ENST00000490539 DOCK1Q14185 1865 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms