RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 CTSWP56202 376 aa4.97□□□□□ -1.61
CD46-216ENST00000490278 RAB1AP62820 205 aa4.97□□□□□ -1.61
CD46-216ENST00000490278 GPSM2P81274 684 aa4.97□□□□□ -1.61
CD46-216ENST00000490278 FGL2Q14314 439 aa4.97□□□□□ -1.61
CD46-216ENST00000490278 PLS1Q14651 629 aa4.97□□□□□ -1.61
CD46-216ENST00000490278 UBXN2BQ14CS0 331 aa4.97□□□□□ -1.61
CD46-216ENST00000490278 VPS72Q15906 364 aa4.97□□□□□ -1.61
CD46-216ENST00000490278 CSRP2Q16527 193 aa4.97□□□□□ -1.61
CD46-216ENST00000490278 DCAF17Q5H9S7 520 aaPredicted RBP4.97□□□□□ -1.61
CD46-216ENST00000490278 CYB5RLQ6IPT4 315 aa4.97□□□□□ -1.61
CD46-216ENST00000490278 PPP4R4Q6NUP7 873 aa4.97□□□□□ -1.61
CD46-216ENST00000490278 UBE3BQ7Z3V4 1068 aa4.97□□□□□ -1.61
CD46-216ENST00000490278 FAM90A1Q86YD7 464 aa4.97□□□□□ -1.61
CD46-216ENST00000490278 CCAR1Q8IX12 1150 aaKnown RBP4.97□□□□□ -1.61
CD46-216ENST00000490278 CCDC146Q8IYE0 955 aa4.97□□□□□ -1.61
CD46-216ENST00000490278 ZNF808Q8N4W9 903 aaPredicted RBP4.97□□□□□ -1.61
CD46-216ENST00000490278 LOXL4Q96JB6 756 aa4.97□□□□□ -1.61
CD46-216ENST00000490278 WWC2-AS2Q96NR7 200 aa4.97□□□□□ -1.61
CD46-216ENST00000490278 CD248Q9HCU0 757 aa4.97□□□□□ -1.61
CD46-216ENST00000490278 DDX21Q9NR30 783 aaKnown RBP eCLIP4.97□□□□□ -1.61
CD46-216ENST00000490278 GNL3LQ9NVN8 582 aaKnown RBP4.97□□□□□ -1.61
CD46-216ENST00000490278 POGKQ9P215 609 aa4.97□□□□□ -1.61
CD46-216ENST00000490278 L1RE1Q9UN81 338 aa4.97□□□□□ -1.61
CD46-216ENST00000490278 JAG2Q9Y219 1238 aa4.97□□□□□ -1.61
CD46-216ENST00000490278 MYL1P05976 194 aa4.96□□□□□ -1.62
CD46-216ENST00000490278 SBK3P0C264 359 aa4.96□□□□□ -1.62
CD46-216ENST00000490278 TRIM27P14373 513 aa4.96□□□□□ -1.62
CD46-216ENST00000490278 RHCEP18577 417 aa4.96□□□□□ -1.62
CD46-216ENST00000490278 HIBADHP31937 336 aaKnown RBP4.96□□□□□ -1.62
CD46-216ENST00000490278 RABGGTBP53611 331 aa4.96□□□□□ -1.62
CD46-216ENST00000490278 CACNB3P54284 484 aa4.96□□□□□ -1.62
CD46-216ENST00000490278 PURAQ00577 322 aaKnown RBP4.96□□□□□ -1.62
CD46-216ENST00000490278 RHDQ02161 417 aa4.96□□□□□ -1.62
CD46-216ENST00000490278 KSR2Q6VAB6 950 aa4.96□□□□□ -1.62
CD46-216ENST00000490278 MAEAQ7L5Y9 396 aa4.96□□□□□ -1.62
CD46-216ENST00000490278 RNF169Q8NCN4 708 aa4.96□□□□□ -1.62
CD46-216ENST00000490278 FAM156AQ8NDB6 213 aa4.96□□□□□ -1.62
CD46-216ENST00000490278 CHST13Q8NET6 341 aa4.96□□□□□ -1.62
CD46-216ENST00000490278 OR10H5Q8NGA6 315 aa4.96□□□□□ -1.62
CD46-216ENST00000490278 BRIX1Q8TDN6 353 aaKnown RBP4.96□□□□□ -1.62
CD46-216ENST00000490278 EDAQ92838 391 aa4.96□□□□□ -1.62
CD46-216ENST00000490278 SARGQ9BW04 601 aa4.96□□□□□ -1.62
CD46-216ENST00000490278 PACSIN1Q9BY11 444 aa4.96□□□□□ -1.62
CD46-216ENST00000490278 DEF6Q9H4E7 631 aa4.96□□□□□ -1.62
CD46-216ENST00000490278 ARNT2Q9HBZ2 717 aa4.96□□□□□ -1.62
CD46-216ENST00000490278 SARS2Q9NP81 518 aaKnown RBP4.96□□□□□ -1.62
CD46-216ENST00000490278 FBXO34Q9NWN3 711 aa4.96□□□□□ -1.62
CD46-216ENST00000490278 TCAF1Q9Y4C2 921 aa4.96□□□□□ -1.62
CD46-216ENST00000490278 PCDHA1Q9Y5I3 950 aa4.96□□□□□ -1.62
CD46-216ENST00000490278 GOLGA6L6A8MZA4 724 aa4.95□□□□□ -1.62
CD46-216ENST00000490278 B8ZZF3 427 aa4.95□□□□□ -1.62
CD46-216ENST00000490278 SLC43A1O75387 559 aa4.95□□□□□ -1.62
CD46-216ENST00000490278 HAUS5O94927 633 aa4.95□□□□□ -1.62
CD46-216ENST00000490278 GNAI3P08754 354 aa4.95□□□□□ -1.62
CD46-216ENST00000490278 PIK3CGP48736 1102 aa4.95□□□□□ -1.62
CD46-216ENST00000490278 GNAI1P63096 354 aa4.95□□□□□ -1.62
CD46-216ENST00000490278 FAM193AP78312 1265 aa4.95□□□□□ -1.62
CD46-216ENST00000490278 CNN3Q15417 329 aaKnown RBP4.95□□□□□ -1.62
CD46-216ENST00000490278 KIAA0753Q2KHM9 967 aa4.95□□□□□ -1.62
CD46-216ENST00000490278 CCDC93Q567U6 631 aa4.95□□□□□ -1.62
CD46-216ENST00000490278 RNF220Q5VTB9 566 aa4.95□□□□□ -1.62
CD46-216ENST00000490278 C1QL3Q5VWW1 255 aa4.95□□□□□ -1.62
CD46-216ENST00000490278 NAIF1Q69YI7 327 aaPredicted RBP4.95□□□□□ -1.62
CD46-216ENST00000490278 DARS2Q6PI48 645 aaKnown RBP4.95□□□□□ -1.62
CD46-216ENST00000490278 HTR3DQ70Z44 454 aa4.95□□□□□ -1.62
CD46-216ENST00000490278 PPP1R3BQ86XI6 285 aa4.95□□□□□ -1.62
CD46-216ENST00000490278 TTC9BQ8N6N2 239 aa4.95□□□□□ -1.62
CD46-216ENST00000490278 NT5C1BQ96P26 610 aa4.95□□□□□ -1.62
CD46-216ENST00000490278 ADOQ96SZ5 270 aa4.95□□□□□ -1.62
CD46-216ENST00000490278 MNTQ99583 582 aa4.95□□□□□ -1.62
CD46-216ENST00000490278 C1orf43Q9BWL3 253 aa4.95□□□□□ -1.62
CD46-216ENST00000490278 GPR87Q9BY21 358 aa4.95□□□□□ -1.62
CD46-216ENST00000490278 MRPL46Q9H2W6 279 aaKnown RBP4.95□□□□□ -1.62
CD46-216ENST00000490278 GSTO2Q9H4Y5 243 aa4.95□□□□□ -1.62
CD46-216ENST00000490278 CNNM1Q9NRU3 951 aa4.95□□□□□ -1.62
CD46-216ENST00000490278 JKAMPQ9P055 326 aa4.95□□□□□ -1.62
CD46-216ENST00000490278 STAP2Q9UGK3 403 aa4.95□□□□□ -1.62
CD46-216ENST00000490278 ST6GALNAC2Q9UJ37 374 aa4.95□□□□□ -1.62
CD46-216ENST00000490278 CCDC194A0A1B0GVG4 234 aa4.94□□□□□ -1.62
CD46-216ENST00000490278 KLRG2A4D1S0 409 aaPredicted RBP4.94□□□□□ -1.62
CD46-216ENST00000490278 CFAP69A5D8W1 941 aa4.94□□□□□ -1.62
CD46-216ENST00000490278 DRGXA6NNA5 263 aa4.94□□□□□ -1.62
CD46-216ENST00000490278 GOLIM4O00461 696 aa4.94□□□□□ -1.62
CD46-216ENST00000490278 SLC6A4P31645 630 aa4.94□□□□□ -1.62
CD46-216ENST00000490278 MAN2A2P49641 1150 aa4.94□□□□□ -1.62
CD46-216ENST00000490278 SELENOPP49908 381 aa4.94□□□□□ -1.62
CD46-216ENST00000490278 CNGB1Q14028 1251 aaPredicted RBP4.94□□□□□ -1.62
CD46-216ENST00000490278 MAP9Q49MG5 647 aa4.94□□□□□ -1.62
CD46-216ENST00000490278 COBLL1Q53SF7 1204 aa4.94□□□□□ -1.62
CD46-216ENST00000490278 KHDC1LQ5JSQ8 128 aa4.94□□□□□ -1.62
CD46-216ENST00000490278 SWSAP1Q6NVH7 229 aa4.94□□□□□ -1.62
CD46-216ENST00000490278 ZNF585AQ6P3V2 769 aa4.94□□□□□ -1.62
CD46-216ENST00000490278 Q6ZRM9 215 aa4.94□□□□□ -1.62
CD46-216ENST00000490278 ZNF365Q70YC5 407 aa4.94□□□□□ -1.62
CD46-216ENST00000490278 MED25Q71SY5 747 aa4.94□□□□□ -1.62
CD46-216ENST00000490278 FITM2Q8N6M3 262 aa4.94□□□□□ -1.62
CD46-216ENST00000490278 AOPEPQ8N6M6 819 aa4.94□□□□□ -1.62
CD46-216ENST00000490278 PJA1Q8NG27 643 aa4.94□□□□□ -1.62
CD46-216ENST00000490278 TNPO1Q92973 898 aaKnown RBP4.94□□□□□ -1.62
CD46-216ENST00000490278 PGBD4Q96DM1 585 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms