RNA–Protein interactions for RNA: ENST00000490175.5

SNX5-214, Transcript of sorting nexin 5, humanhuman

TSL 1 (best)

Gene SNX5, Length 2,025 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-214ENST00000490175 FZD8Q9H461 694 aa17.21■□□□□ 0.35
SNX5-214ENST00000490175 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.21■□□□□ 0.35
SNX5-214ENST00000490175 TTLL13PA6NNM8 815 aa17.2■□□□□ 0.34
SNX5-214ENST00000490175 TMEM110-MUSTN1A8MSY1 372 aa17.2■□□□□ 0.34
SNX5-214ENST00000490175 STRNO43815 780 aa17.2■□□□□ 0.34
SNX5-214ENST00000490175 POTEJP0CG39 1038 aa17.2■□□□□ 0.34
SNX5-214ENST00000490175 HARSP12081 509 aaKnown RBP17.2■□□□□ 0.34
SNX5-214ENST00000490175 ACTN2P35609 894 aa17.2■□□□□ 0.34
SNX5-214ENST00000490175 POU5F1Q01860 360 aaKnown RBP17.2■□□□□ 0.34
SNX5-214ENST00000490175 POU5F1BQ06416 359 aa17.2■□□□□ 0.34
SNX5-214ENST00000490175 ARHGAP1Q07960 439 aa17.2■□□□□ 0.34
SNX5-214ENST00000490175 SPOPLQ6IQ16 392 aa17.2■□□□□ 0.34
SNX5-214ENST00000490175 MPZL3Q6UWV2 235 aa17.2■□□□□ 0.34
SNX5-214ENST00000490175 LEKR1Q6ZMV7 388 aa17.2■□□□□ 0.34
SNX5-214ENST00000490175 ZNF467Q7Z7K2 595 aaPredicted RBP17.2■□□□□ 0.34
SNX5-214ENST00000490175 RHPN2Q8IUC4 686 aa17.2■□□□□ 0.34
SNX5-214ENST00000490175 GOLGA6L1Q8N7Z2 621 aa17.2■□□□□ 0.34
SNX5-214ENST00000490175 PDGFCQ9NRA1 345 aa17.2■□□□□ 0.34
SNX5-214ENST00000490175 AMACRQ9UHK6 382 aa17.2■□□□□ 0.34
SNX5-214ENST00000490175 CPSF3Q9UKF6 684 aaKnown RBP17.2■□□□□ 0.34
SNX5-214ENST00000490175 PCDHB4Q9Y5E5 795 aa17.2■□□□□ 0.34
SNX5-214ENST00000490175 PCDHA3Q9Y5H8 950 aa17.2■□□□□ 0.34
SNX5-214ENST00000490175 RBM47A0AV96 593 aaKnown RBP17.2■□□□□ 0.34
SNX5-214ENST00000490175 FAM170AA1A519 330 aa17.2■□□□□ 0.34
SNX5-214ENST00000490175 SPOPO43791 374 aa17.2■□□□□ 0.34
SNX5-214ENST00000490175 ASS1P00966 412 aaKnown RBP17.2■□□□□ 0.34
SNX5-214ENST00000490175 NSFP46459 744 aaKnown RBP17.2■□□□□ 0.34
SNX5-214ENST00000490175 GCLCP48506 637 aaPredicted RBP17.2■□□□□ 0.34
SNX5-214ENST00000490175 GTF2A2P52657 109 aa17.2■□□□□ 0.34
SNX5-214ENST00000490175 IRX5P78411 483 aaPredicted RBP17.2■□□□□ 0.34
SNX5-214ENST00000490175 SEL1L2Q5TEA6 688 aa17.2■□□□□ 0.34
SNX5-214ENST00000490175 EFCAB12Q6NXP0 572 aa17.2■□□□□ 0.34
SNX5-214ENST00000490175 ZBTB33Q86T24 672 aa17.2■□□□□ 0.34
SNX5-214ENST00000490175 KRT35Q92764 455 aa17.2■□□□□ 0.34
SNX5-214ENST00000490175 EMID1Q96A84 441 aaPredicted RBP17.2■□□□□ 0.34
SNX5-214ENST00000490175 VCPIP1Q96JH7 1222 aa17.2■□□□□ 0.34
SNX5-214ENST00000490175 SH3GL2Q99962 352 aa17.2■□□□□ 0.34
SNX5-214ENST00000490175 PTPRHQ9HD43 1115 aa17.2■□□□□ 0.34
SNX5-214ENST00000490175 NUB1Q9Y5A7 615 aa17.2■□□□□ 0.34
SNX5-214ENST00000490175 PDHXO00330 501 aa17.19■□□□□ 0.34
SNX5-214ENST00000490175 GH1P01241 217 aa17.19■□□□□ 0.34
SNX5-214ENST00000490175 TNFSF9P41273 254 aa17.19■□□□□ 0.34
SNX5-214ENST00000490175 DHX34Q14147 1143 aaKnown RBP17.19■□□□□ 0.34
SNX5-214ENST00000490175 DUOXA2Q1HG44 320 aa17.19■□□□□ 0.34
SNX5-214ENST00000490175 TAPT1Q6NXT6 567 aa17.19■□□□□ 0.34
SNX5-214ENST00000490175 TSEN2Q8NCE0 465 aaKnown RBP17.19■□□□□ 0.34
SNX5-214ENST00000490175 RUFY1Q96T51 708 aa17.19■□□□□ 0.34
SNX5-214ENST00000490175 RAB17Q9H0T7 212 aa17.19■□□□□ 0.34
SNX5-214ENST00000490175 FAM114A2Q9NRY5 505 aa17.19■□□□□ 0.34
SNX5-214ENST00000490175 MORF4L1Q9UBU8 362 aa17.19■□□□□ 0.34
SNX5-214ENST00000490175 UTP11Q9Y3A2 253 aaKnown RBP17.19■□□□□ 0.34
SNX5-214ENST00000490175 FAM187AA6NFU0 413 aa17.18■□□□□ 0.34
SNX5-214ENST00000490175 GOLGA8KD6RF30 607 aa17.18■□□□□ 0.34
SNX5-214ENST00000490175 C22orf31O95567 290 aa17.18■□□□□ 0.34
SNX5-214ENST00000490175 IVLP07476 585 aa17.18■□□□□ 0.34
SNX5-214ENST00000490175 FAM153BP0C7A2 387 aa17.18■□□□□ 0.34
SNX5-214ENST00000490175 ADORA2AP29274 412 aa17.18■□□□□ 0.34
SNX5-214ENST00000490175 GNA15P30679 374 aa17.18■□□□□ 0.34
SNX5-214ENST00000490175 ZNF211Q13398 564 aaPredicted RBP17.18■□□□□ 0.34
SNX5-214ENST00000490175 FAM153CQ494X1 144 aa17.18■□□□□ 0.34
SNX5-214ENST00000490175 SEZ6Q53EL9 994 aa17.18■□□□□ 0.34
SNX5-214ENST00000490175 ATF7IP2Q5U623 682 aa17.18■□□□□ 0.34
SNX5-214ENST00000490175 TMEM270Q6UE05 265 aa17.18■□□□□ 0.34
SNX5-214ENST00000490175 UBR7Q8N806 425 aa17.18■□□□□ 0.34
SNX5-214ENST00000490175 RBBP8NLQ8NC74 664 aaPredicted RBP17.18■□□□□ 0.34
SNX5-214ENST00000490175 MS4A4AQ96JQ5 239 aa17.18■□□□□ 0.34
SNX5-214ENST00000490175 PLVAPQ9BX97 442 aa17.18■□□□□ 0.34
SNX5-214ENST00000490175 PLEKHA4Q9H4M7 779 aa17.18■□□□□ 0.34
SNX5-214ENST00000490175 CHORDC1Q9UHD1 332 aaPredicted RBP17.18■□□□□ 0.34
SNX5-214ENST00000490175 FAM153AQ9UHL3 310 aa17.18■□□□□ 0.34
SNX5-214ENST00000490175 ZSWIM8A7E2V4 1837 aa17.18■□□□□ 0.34
SNX5-214ENST00000490175 MAGEB2O15479 319 aa17.18■□□□□ 0.34
SNX5-214ENST00000490175 ECHS1P30084 290 aa17.18■□□□□ 0.34
SNX5-214ENST00000490175 HSPA9P38646 679 aaKnown RBP17.18■□□□□ 0.34
SNX5-214ENST00000490175 SLC1A1P43005 524 aa17.18■□□□□ 0.34
SNX5-214ENST00000490175 ZNF132P52740 706 aa17.18■□□□□ 0.34
SNX5-214ENST00000490175 FKBP1BP68106 108 aa17.18■□□□□ 0.34
SNX5-214ENST00000490175 HLTFQ14527 1009 aaKnown RBP eCLIP17.18■□□□□ 0.34
SNX5-214ENST00000490175 SGSM1Q2NKQ1 1148 aa17.18■□□□□ 0.34
SNX5-214ENST00000490175 LIN9Q5TKA1 542 aa17.18■□□□□ 0.34
SNX5-214ENST00000490175 MON1BQ7L1V2 547 aa17.18■□□□□ 0.34
SNX5-214ENST00000490175 ANKRD23Q86SG2 305 aa17.18■□□□□ 0.34
SNX5-214ENST00000490175 EFCAB13Q8IY85 973 aa17.18■□□□□ 0.34
SNX5-214ENST00000490175 PPTC7Q8NI37 304 aa17.18■□□□□ 0.34
SNX5-214ENST00000490175 TRAPPC12Q8WVT3 735 aa17.18■□□□□ 0.34
SNX5-214ENST00000490175 FAM204AQ9H8W3 233 aa17.18■□□□□ 0.34
SNX5-214ENST00000490175 TNFSF13BQ9Y275 285 aa17.18■□□□□ 0.34
SNX5-214ENST00000490175 COL1A2P08123 1366 aa17.17■□□□□ 0.34
SNX5-214ENST00000490175 INO80B-WBP1J3KQ70 363 aa17.17■□□□□ 0.34
SNX5-214ENST00000490175 TTI1O43156 1089 aa17.17■□□□□ 0.34
SNX5-214ENST00000490175 B4GALT4O60513 344 aa17.17■□□□□ 0.34
SNX5-214ENST00000490175 LGALS2P05162 132 aa17.17■□□□□ 0.34
SNX5-214ENST00000490175 MAPK4P31152 587 aa17.17■□□□□ 0.34
SNX5-214ENST00000490175 CHRNA3P32297 505 aa17.17■□□□□ 0.34
SNX5-214ENST00000490175 MARCKSL1P49006 195 aa17.17■□□□□ 0.34
SNX5-214ENST00000490175 RWDD2BP57060 319 aa17.17■□□□□ 0.34
SNX5-214ENST00000490175 MBTD1Q05BQ5 628 aa17.17■□□□□ 0.34
SNX5-214ENST00000490175 PPFIA1Q13136 1202 aa17.17■□□□□ 0.34
SNX5-214ENST00000490175 FAM187BQ17R55 369 aa17.17■□□□□ 0.34
SNX5-214ENST00000490175 CFAP58Q5T655 872 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms