RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 KCNK12Q9HB15 430 aa10.64□□□□□ -0.71
TMEM39A-210ENST00000490099 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.64□□□□□ -0.71
TMEM39A-210ENST00000490099 SRPRBQ9Y5M8 271 aaKnown RBP10.64□□□□□ -0.71
TMEM39A-210ENST00000490099 DOCK6Q96HP0 2047 aa10.63□□□□□ -0.71
TMEM39A-210ENST00000490099 CLUHO75153 1309 aa10.63□□□□□ -0.71
TMEM39A-210ENST00000490099 A0A0B4J269 797 aa10.63□□□□□ -0.71
TMEM39A-210ENST00000490099 ANHXE9PGG2 379 aa10.63□□□□□ -0.71
TMEM39A-210ENST00000490099 SYN3O14994 580 aa10.63□□□□□ -0.71
TMEM39A-210ENST00000490099 CLDN3O15551 220 aa10.63□□□□□ -0.71
TMEM39A-210ENST00000490099 TRAPPC3O43617 180 aa10.63□□□□□ -0.71
TMEM39A-210ENST00000490099 ABLIM3O94929 683 aa10.63□□□□□ -0.71
TMEM39A-210ENST00000490099 CLTAP09496 248 aa10.63□□□□□ -0.71
TMEM39A-210ENST00000490099 PLCG1P19174 1290 aa10.63□□□□□ -0.71
TMEM39A-210ENST00000490099 YARSP54577 528 aaKnown RBP10.63□□□□□ -0.71
TMEM39A-210ENST00000490099 GTF2BQ00403 316 aa10.63□□□□□ -0.71
TMEM39A-210ENST00000490099 NHLH1Q02575 133 aa10.63□□□□□ -0.71
TMEM39A-210ENST00000490099 RAD51AP2Q09MP3 1159 aa10.63□□□□□ -0.71
TMEM39A-210ENST00000490099 STRN3Q13033 797 aa10.63□□□□□ -0.71
TMEM39A-210ENST00000490099 TDGQ13569 410 aa10.63□□□□□ -0.71
TMEM39A-210ENST00000490099 ZRSR1Q15695 479 aaKnown RBP10.63□□□□□ -0.71
TMEM39A-210ENST00000490099 ANKS3Q6ZW76 656 aa10.63□□□□□ -0.71
TMEM39A-210ENST00000490099 USP49Q70CQ1 688 aa10.63□□□□□ -0.71
TMEM39A-210ENST00000490099 ZBTB33Q86T24 672 aa10.63□□□□□ -0.71
TMEM39A-210ENST00000490099 STAMQ92783 540 aa10.63□□□□□ -0.71
TMEM39A-210ENST00000490099 C18orf25Q96B23 403 aaPredicted RBP10.63□□□□□ -0.71
TMEM39A-210ENST00000490099 CALML4Q96GE6 196 aa10.63□□□□□ -0.71
TMEM39A-210ENST00000490099 CDK5RAP3Q96JB5 506 aa10.63□□□□□ -0.71
TMEM39A-210ENST00000490099 MYADMQ96S97 322 aa10.63□□□□□ -0.71
TMEM39A-210ENST00000490099 TSPAN18Q96SJ8 248 aa10.63□□□□□ -0.71
TMEM39A-210ENST00000490099 TCHPQ9BT92 498 aa10.63□□□□□ -0.71
TMEM39A-210ENST00000490099 STRA6Q9BX79 667 aa10.63□□□□□ -0.71
TMEM39A-210ENST00000490099 TMEM121BQ9BXQ6 578 aaPredicted RBP10.63□□□□□ -0.71
TMEM39A-210ENST00000490099 GOLGA2P5Q9HBQ8 144 aa10.63□□□□□ -0.71
TMEM39A-210ENST00000490099 FBXO2Q9UK22 296 aaPredicted RBP10.63□□□□□ -0.71
TMEM39A-210ENST00000490099 TBX20Q9UMR3 447 aa10.63□□□□□ -0.71
TMEM39A-210ENST00000490099 MTMR6Q9Y217 621 aa10.63□□□□□ -0.71
TMEM39A-210ENST00000490099 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.63□□□□□ -0.71
TMEM39A-210ENST00000490099 CLIC4Q9Y696 253 aa10.63□□□□□ -0.71
TMEM39A-210ENST00000490099 PODXLO00592 558 aa10.62□□□□□ -0.71
TMEM39A-210ENST00000490099 PDGFBP01127 241 aaPredicted RBP10.62□□□□□ -0.71
TMEM39A-210ENST00000490099 LAMP2P13473 410 aa10.62□□□□□ -0.71
TMEM39A-210ENST00000490099 CYP3A5P20815 502 aa10.62□□□□□ -0.71
TMEM39A-210ENST00000490099 TKTP29401 623 aaKnown RBP10.62□□□□□ -0.71
TMEM39A-210ENST00000490099 LRPAP1P30533 357 aa10.62□□□□□ -0.71
TMEM39A-210ENST00000490099 OR1D2P34982 312 aa10.62□□□□□ -0.71
TMEM39A-210ENST00000490099 CLCN5P51795 746 aa10.62□□□□□ -0.71
TMEM39A-210ENST00000490099 VCPP55072 806 aaKnown RBP10.62□□□□□ -0.71
TMEM39A-210ENST00000490099 OSTNP61366 133 aa10.62□□□□□ -0.71
TMEM39A-210ENST00000490099 POU5F1Q01860 360 aaKnown RBP10.62□□□□□ -0.71
TMEM39A-210ENST00000490099 TCF15Q12870 199 aa10.62□□□□□ -0.71
TMEM39A-210ENST00000490099 MCM6Q14566 821 aa10.62□□□□□ -0.71
TMEM39A-210ENST00000490099 NOLC1Q14978 699 aaKnown RBP eCLIP10.62□□□□□ -0.71
TMEM39A-210ENST00000490099 KARSQ15046 597 aaKnown RBP10.62□□□□□ -0.71
TMEM39A-210ENST00000490099 KYAT1Q16773 422 aa10.62□□□□□ -0.71
TMEM39A-210ENST00000490099 SLC39A4Q6P5W5 647 aa10.62□□□□□ -0.71
TMEM39A-210ENST00000490099 GPBP1Q86WP2 473 aa10.62□□□□□ -0.71
TMEM39A-210ENST00000490099 CEP57Q86XR8 500 aa10.62□□□□□ -0.71
TMEM39A-210ENST00000490099 SUGP1Q8IWZ8 645 aaKnown RBP10.62□□□□□ -0.71
TMEM39A-210ENST00000490099 SLC44A3Q8N4M1 653 aa10.62□□□□□ -0.71
TMEM39A-210ENST00000490099 PRSS33Q8NF86 280 aa10.62□□□□□ -0.71
TMEM39A-210ENST00000490099 ZNF461Q8TAF7 563 aa10.62□□□□□ -0.71
TMEM39A-210ENST00000490099 EPSTI1Q96J88 318 aa10.62□□□□□ -0.71
TMEM39A-210ENST00000490099 SUSD3Q96L08 255 aa10.62□□□□□ -0.71
TMEM39A-210ENST00000490099 PARVGQ9HBI0 331 aa10.62□□□□□ -0.71
TMEM39A-210ENST00000490099 AVENQ9NQS1 362 aaPredicted RBP10.62□□□□□ -0.71
TMEM39A-210ENST00000490099 DUSP12Q9UNI6 340 aa10.62□□□□□ -0.71
TMEM39A-210ENST00000490099 STYXL1Q9Y6J8 313 aa10.62□□□□□ -0.71
TMEM39A-210ENST00000490099 ZFP37Q9Y6Q3 630 aaPredicted RBP10.62□□□□□ -0.71
TMEM39A-210ENST00000490099 ARHGEF37A1IGU5 675 aa10.61□□□□□ -0.71
TMEM39A-210ENST00000490099 I3L4J1 428 aa10.61□□□□□ -0.71
TMEM39A-210ENST00000490099 TRAK2O60296 914 aa10.61□□□□□ -0.71
TMEM39A-210ENST00000490099 C8AP07357 584 aa10.61□□□□□ -0.71
TMEM39A-210ENST00000490099 MYBP10242 640 aa10.61□□□□□ -0.71
TMEM39A-210ENST00000490099 NPR3P17342 541 aa10.61□□□□□ -0.71
TMEM39A-210ENST00000490099 ABCD1P33897 745 aa10.61□□□□□ -0.71
TMEM39A-210ENST00000490099 BRCC3P46736 316 aa10.61□□□□□ -0.71
TMEM39A-210ENST00000490099 AARSP49588 968 aaKnown RBP eCLIP10.61□□□□□ -0.71
TMEM39A-210ENST00000490099 HTR4Q13639 388 aa10.61□□□□□ -0.71
TMEM39A-210ENST00000490099 SLC39A14Q15043 492 aa10.61□□□□□ -0.71
TMEM39A-210ENST00000490099 ENOX2Q16206 610 aaKnown RBP10.61□□□□□ -0.71
TMEM39A-210ENST00000490099 SEZ6Q53EL9 994 aa10.61□□□□□ -0.71
TMEM39A-210ENST00000490099 VARS2Q5ST30 1063 aaKnown RBP10.61□□□□□ -0.71
TMEM39A-210ENST00000490099 AXDND1Q5T1B0 1012 aaPredicted RBP10.61□□□□□ -0.71
TMEM39A-210ENST00000490099 FAM173BQ6P4H8 233 aa10.61□□□□□ -0.71
TMEM39A-210ENST00000490099 GLYCTKQ8IVS8 523 aa10.61□□□□□ -0.71
TMEM39A-210ENST00000490099 SNX21Q969T3 373 aa10.61□□□□□ -0.71
TMEM39A-210ENST00000490099 WNT16Q9UBV4 365 aa10.61□□□□□ -0.71
TMEM39A-210ENST00000490099 STK17AQ9UEE5 414 aa10.61□□□□□ -0.71
TMEM39A-210ENST00000490099 KCNH3Q9ULD8 1083 aa10.61□□□□□ -0.71
TMEM39A-210ENST00000490099 MAFFQ9ULX9 164 aa10.61□□□□□ -0.71
TMEM39A-210ENST00000490099 BOLA1Q9Y3E2 137 aa10.61□□□□□ -0.71
TMEM39A-210ENST00000490099 CDY1Q9Y6F8 540 aa10.61□□□□□ -0.71
TMEM39A-210ENST00000490099 CITO14578 2027 aa10.61□□□□□ -0.71
TMEM39A-210ENST00000490099 NOTCH4Q99466 2003 aa10.61□□□□□ -0.71
TMEM39A-210ENST00000490099 KMT2EQ8IZD2 1858 aa10.6□□□□□ -0.71
TMEM39A-210ENST00000490099 MYH11P35749 1972 aa10.6□□□□□ -0.71
TMEM39A-210ENST00000490099 VPS37CA5D8V6 355 aaPredicted RBP10.6□□□□□ -0.71
TMEM39A-210ENST00000490099 K7ELQ4 463 aaPredicted RBP10.6□□□□□ -0.71
TMEM39A-210ENST00000490099 M0QZQ0 153 aa10.6□□□□□ -0.71
TMEM39A-210ENST00000490099 OGTO15294 1046 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms